RNA–Protein interactions for RNA: ENST00000543046.1

MDM2-229, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-229ENST00000543046 NPC1L1Q9UHC9 1359 aa4.5□□□□□ -1.69
MDM2-229ENST00000543046 EMSYQ7Z589 1322 aa4.49□□□□□ -1.69
MDM2-229ENST00000543046 C3orf70A6NLC5 250 aaPredicted RBP4.49□□□□□ -1.69
MDM2-229ENST00000543046 SLC38A8A6NNN8 435 aa4.49□□□□□ -1.69
MDM2-229ENST00000543046 IFRD1O00458 451 aaPredicted RBP4.49□□□□□ -1.69
MDM2-229ENST00000543046 CREB3O43889 395 aa4.49□□□□□ -1.69
MDM2-229ENST00000543046 TLR2O60603 784 aa4.49□□□□□ -1.69
MDM2-229ENST00000543046 ACTL6BO94805 426 aa4.49□□□□□ -1.69
MDM2-229ENST00000543046 LARGE1O95461 756 aa4.49□□□□□ -1.69
MDM2-229ENST00000543046 ALDOAP04075 364 aaKnown RBP4.49□□□□□ -1.69
MDM2-229ENST00000543046 RFPL3SP0C7P2 107 aa4.49□□□□□ -1.69
MDM2-229ENST00000543046 CCDC172P0C7W6 258 aa4.49□□□□□ -1.69
MDM2-229ENST00000543046 AKR1A1P14550 325 aa4.49□□□□□ -1.69
MDM2-229ENST00000543046 GRK5P34947 590 aa4.49□□□□□ -1.69
MDM2-229ENST00000543046 CPA2P48052 419 aa4.49□□□□□ -1.69
MDM2-229ENST00000543046 SLC12A2P55011 1212 aa4.49□□□□□ -1.69
MDM2-229ENST00000543046 POLE2P56282 527 aa4.49□□□□□ -1.69
MDM2-229ENST00000543046 SLC37A1P57057 533 aa4.49□□□□□ -1.69
MDM2-229ENST00000543046 FOXL2P58012 376 aa4.49□□□□□ -1.69
MDM2-229ENST00000543046 TAS2R50P59544 299 aa4.49□□□□□ -1.69
MDM2-229ENST00000543046 RBM6P78332 1123 aaKnown RBP4.49□□□□□ -1.69
MDM2-229ENST00000543046 RNASELQ05823 741 aaKnown RBP4.49□□□□□ -1.69
MDM2-229ENST00000543046 KLHL40Q2TBA0 621 aa4.49□□□□□ -1.69
MDM2-229ENST00000543046 ANXA2RQ3ZCQ2 193 aa4.49□□□□□ -1.69
MDM2-229ENST00000543046 C10orf62Q5T681 223 aaPredicted RBP4.49□□□□□ -1.69
MDM2-229ENST00000543046 C10orf25Q5T742 122 aa4.49□□□□□ -1.69
MDM2-229ENST00000543046 SHC4Q6S5L8 630 aa4.49□□□□□ -1.69
MDM2-229ENST00000543046 KLHL17Q6TDP4 642 aa4.49□□□□□ -1.69
MDM2-229ENST00000543046 DEF8Q6ZN54 512 aa4.49□□□□□ -1.69
MDM2-229ENST00000543046 CACNA2D3Q8IZS8 1091 aa4.49□□□□□ -1.69
MDM2-229ENST00000543046 BCAS4Q8TDM0 211 aa4.49□□□□□ -1.69
MDM2-229ENST00000543046 PIGOQ8TEQ8 1089 aa4.49□□□□□ -1.69
MDM2-229ENST00000543046 ABHD14AQ9BUJ0 271 aa4.49□□□□□ -1.69
MDM2-229ENST00000543046 SCNM1Q9BWG6 230 aa4.49□□□□□ -1.69
MDM2-229ENST00000543046 PRDM8Q9NQV8 689 aa4.49□□□□□ -1.69
MDM2-229ENST00000543046 DIAPH3Q9NSV4 1193 aa4.49□□□□□ -1.69
MDM2-229ENST00000543046 LIN7CQ9NUP9 197 aaKnown RBP4.49□□□□□ -1.69
MDM2-229ENST00000543046 MTMR4Q9NYA4 1195 aa4.49□□□□□ -1.69
MDM2-229ENST00000543046 DONSONQ9NYP3 566 aa4.49□□□□□ -1.69
MDM2-229ENST00000543046 SLC12A4Q9UP95 1085 aa4.49□□□□□ -1.69
MDM2-229ENST00000543046 DHX29Q7Z478 1369 aaKnown RBP4.49□□□□□ -1.69
MDM2-229ENST00000543046 SPATA31E1Q6ZUB1 1445 aa4.48□□□□□ -1.69
MDM2-229ENST00000543046 UACAQ9BZF9 1416 aa4.48□□□□□ -1.69
MDM2-229ENST00000543046 NCOA3Q9Y6Q9 1424 aa4.48□□□□□ -1.69
MDM2-229ENST00000543046 TBC1D3DA0A087WVF3 549 aa4.48□□□□□ -1.69
MDM2-229ENST00000543046 TBC1D3IA0A087WXS9 549 aa4.48□□□□□ -1.69
MDM2-229ENST00000543046 TBC1D3EA0A087X179 549 aa4.48□□□□□ -1.69
MDM2-229ENST00000543046 TBC1D3KA0A087X1G2 549 aa4.48□□□□□ -1.69
MDM2-229ENST00000543046 TBC1D3BA6NDS4 549 aa4.48□□□□□ -1.69
MDM2-229ENST00000543046 TBC1D3FA6NER0 549 aaPredicted RBP4.48□□□□□ -1.69
MDM2-229ENST00000543046 TTC36A6NLP5 189 aa4.48□□□□□ -1.69
MDM2-229ENST00000543046 EFCAB8A8MWE9 144 aa4.48□□□□□ -1.69
MDM2-229ENST00000543046 TBC1D3LB9A6J9 549 aa4.48□□□□□ -1.69
MDM2-229ENST00000543046 PPEF2O14830 753 aa4.48□□□□□ -1.69
MDM2-229ENST00000543046 MOSPD3O75425 235 aa4.48□□□□□ -1.69
MDM2-229ENST00000543046 CNTN5O94779 1100 aa4.48□□□□□ -1.69
MDM2-229ENST00000543046 SGPL1O95470 568 aa4.48□□□□□ -1.69
MDM2-229ENST00000543046 LDHAP00338 332 aaKnown RBP4.48□□□□□ -1.69
MDM2-229ENST00000543046 FGBP02675 491 aa4.48□□□□□ -1.69
MDM2-229ENST00000543046 TBC1D3HP0C7X1 549 aa4.48□□□□□ -1.69
MDM2-229ENST00000543046 CYP19A1P11511 503 aaPredicted RBP4.48□□□□□ -1.69
MDM2-229ENST00000543046 IGFBP2P18065 325 aa4.48□□□□□ -1.69
MDM2-229ENST00000543046 TFEBP19484 476 aa4.48□□□□□ -1.69
MDM2-229ENST00000543046 GTF2A1P52655 376 aaPredicted RBP4.48□□□□□ -1.69
MDM2-229ENST00000543046 PNLIPRP1P54315 467 aa4.48□□□□□ -1.69
MDM2-229ENST00000543046 AP2B1P63010 937 aa4.48□□□□□ -1.69
MDM2-229ENST00000543046 KRT72Q14CN4 511 aa4.48□□□□□ -1.69
MDM2-229ENST00000543046 RABEP1Q15276 862 aa4.48□□□□□ -1.69
MDM2-229ENST00000543046 TUBB8Q3ZCM7 444 aa4.48□□□□□ -1.69
MDM2-229ENST00000543046 PXDC1Q5TGL8 231 aa4.48□□□□□ -1.69
MDM2-229ENST00000543046 TBC1D3GQ6DHY5 549 aa4.48□□□□□ -1.69
MDM2-229ENST00000543046 SULT6B1Q6IMI4 303 aa4.48□□□□□ -1.69
MDM2-229ENST00000543046 TBC1D3CQ6IPX1 549 aa4.48□□□□□ -1.69
MDM2-229ENST00000543046 NFRKBQ6P4R8 1299 aa4.48□□□□□ -1.69
MDM2-229ENST00000543046 CCDC174Q6PII3 467 aa4.48□□□□□ -1.69
MDM2-229ENST00000543046 ZNF474Q6S9Z5 364 aaPredicted RBP4.48□□□□□ -1.69
MDM2-229ENST00000543046 RAB11FIP2Q7L804 512 aa4.48□□□□□ -1.69
MDM2-229ENST00000543046 ANKRD13BQ86YJ7 626 aa4.48□□□□□ -1.69
MDM2-229ENST00000543046 SLC44A2Q8IWA5 706 aaPredicted RBP4.48□□□□□ -1.69
MDM2-229ENST00000543046 CCDC117Q8IWD4 279 aaPredicted RBP4.48□□□□□ -1.69
MDM2-229ENST00000543046 ADGRF3Q8IZF5 1079 aa4.48□□□□□ -1.69
MDM2-229ENST00000543046 TBC1D3Q8IZP1 549 aaPredicted RBP4.48□□□□□ -1.69
MDM2-229ENST00000543046 NANOGP1Q8N7R0 232 aa4.48□□□□□ -1.69
MDM2-229ENST00000543046 ADPRHL1Q8NDY3 354 aa4.48□□□□□ -1.69
MDM2-229ENST00000543046 C16orf52Q8NHV5 167 aa4.48□□□□□ -1.69
MDM2-229ENST00000543046 SCAMP5Q8TAC9 235 aa4.48□□□□□ -1.69
MDM2-229ENST00000543046 WIPF2Q8TF74 440 aaPredicted RBP4.48□□□□□ -1.69
MDM2-229ENST00000543046 KAT2BQ92831 832 aa4.48□□□□□ -1.69
MDM2-229ENST00000543046 UBA5Q9GZZ9 404 aa4.48□□□□□ -1.69
MDM2-229ENST00000543046 BRD8Q9H0E9 1235 aa4.48□□□□□ -1.69
MDM2-229ENST00000543046 PABPC3Q9H361 631 aaKnown RBP4.48□□□□□ -1.69
MDM2-229ENST00000543046 MOV10Q9HCE1 1003 aaKnown RBP4.48□□□□□ -1.69
MDM2-229ENST00000543046 ERVK-5Q9HDB9 667 aa4.48□□□□□ -1.69
MDM2-229ENST00000543046 MED4Q9NPJ6 270 aa4.48□□□□□ -1.69
MDM2-229ENST00000543046 DAPP1Q9UN19 280 aa4.48□□□□□ -1.69
MDM2-229ENST00000543046 EIF3AQ14152 1382 aaKnown RBP4.48□□□□□ -1.69
MDM2-229ENST00000543046 PLEKHH2Q8IVE3 1493 aa4.48□□□□□ -1.69
MDM2-229ENST00000543046 ARAP1Q96P48 1450 aa4.48□□□□□ -1.69
MDM2-229ENST00000543046 NLRP1Q9C000 1473 aa4.48□□□□□ -1.69
MDM2-229ENST00000543046 REC8O95072 547 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms