RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 GOLGA6L9A6NEM1 432 aa10.99□□□□□ -0.65
NPIPB3-210ENST00000542817 NEDD8-MDP1E9PL57 170 aa10.99□□□□□ -0.65
NPIPB3-210ENST00000542817 EEF2KO00418 725 aaKnown RBP10.99□□□□□ -0.65
NPIPB3-210ENST00000542817 ENC1O14682 589 aa10.99□□□□□ -0.65
NPIPB3-210ENST00000542817 CREB3O43889 395 aa10.99□□□□□ -0.65
NPIPB3-210ENST00000542817 TULP3O75386 442 aa10.99□□□□□ -0.65
NPIPB3-210ENST00000542817 LUC7L3O95232 432 aaKnown RBP10.99□□□□□ -0.65
NPIPB3-210ENST00000542817 ATP1A1P05023 1023 aaKnown RBP10.99□□□□□ -0.65
NPIPB3-210ENST00000542817 RHOQP17081 205 aa10.99□□□□□ -0.65
NPIPB3-210ENST00000542817 ERCC2P18074 760 aa10.99□□□□□ -0.65
NPIPB3-210ENST00000542817 AMPD1P23109 780 aa10.99□□□□□ -0.65
NPIPB3-210ENST00000542817 HLA-FP30511 346 aa10.99□□□□□ -0.65
NPIPB3-210ENST00000542817 CD70P32970 193 aa10.99□□□□□ -0.65
NPIPB3-210ENST00000542817 PTPN7P35236 360 aa10.99□□□□□ -0.65
NPIPB3-210ENST00000542817 GAD2Q05329 585 aa10.99□□□□□ -0.65
NPIPB3-210ENST00000542817 SLC10A2Q12908 348 aaPredicted RBP10.99□□□□□ -0.65
NPIPB3-210ENST00000542817 PDK2Q15119 407 aa10.99□□□□□ -0.65
NPIPB3-210ENST00000542817 LLGL1Q15334 1064 aa10.99□□□□□ -0.65
NPIPB3-210ENST00000542817 ANKRD20A8PQ5CZ79 823 aa10.99□□□□□ -0.65
NPIPB3-210ENST00000542817 TMEM215Q68D42 235 aa10.99□□□□□ -0.65
NPIPB3-210ENST00000542817 CHST9Q7L1S5 443 aa10.99□□□□□ -0.65
NPIPB3-210ENST00000542817 ARHGAP12Q8IWW6 846 aa10.99□□□□□ -0.65
NPIPB3-210ENST00000542817 NAT16Q8N8M0 369 aa10.99□□□□□ -0.65
NPIPB3-210ENST00000542817 RTL3Q8N8U3 475 aaKnown RBP10.99□□□□□ -0.65
NPIPB3-210ENST00000542817 KCTD6Q8NC69 237 aa10.99□□□□□ -0.65
NPIPB3-210ENST00000542817 HJURPQ8NCD3 748 aaPredicted RBP10.99□□□□□ -0.65
NPIPB3-210ENST00000542817 EXD1Q8NHP7 514 aa10.99□□□□□ -0.65
NPIPB3-210ENST00000542817 DDI1Q8WTU0 396 aa10.99□□□□□ -0.65
NPIPB3-210ENST00000542817 RNF25Q96BH1 459 aaPredicted RBP10.99□□□□□ -0.65
NPIPB3-210ENST00000542817 TBC1D31Q96DN5 1066 aa10.99□□□□□ -0.65
NPIPB3-210ENST00000542817 RNF157Q96PX1 679 aa10.99□□□□□ -0.65
NPIPB3-210ENST00000542817 ZNF670Q9BS34 389 aa10.99□□□□□ -0.65
NPIPB3-210ENST00000542817 BBS2Q9BXC9 721 aa10.99□□□□□ -0.65
NPIPB3-210ENST00000542817 ZYG11BQ9C0D3 744 aa10.99□□□□□ -0.65
NPIPB3-210ENST00000542817 LRRC19Q9H756 370 aa10.99□□□□□ -0.65
NPIPB3-210ENST00000542817 HEBP1Q9NRV9 189 aa10.99□□□□□ -0.65
NPIPB3-210ENST00000542817 TMEM248Q9NWD8 314 aa10.99□□□□□ -0.65
NPIPB3-210ENST00000542817 STIM2Q9P246 746 aa10.99□□□□□ -0.65
NPIPB3-210ENST00000542817 RCOR3Q9P2K3 495 aaPredicted RBP10.99□□□□□ -0.65
NPIPB3-210ENST00000542817 SORCS3Q9UPU3 1222 aa10.99□□□□□ -0.65
NPIPB3-210ENST00000542817 TECTAO75443 2155 aa10.99□□□□□ -0.65
NPIPB3-210ENST00000542817 hCG_1818297A0A087WSY0 165 aa10.98□□□□□ -0.65
NPIPB3-210ENST00000542817 A0A0A0MRY4 1105 aa10.98□□□□□ -0.65
NPIPB3-210ENST00000542817 A0A1B0GVM2 712 aa10.98□□□□□ -0.65
NPIPB3-210ENST00000542817 TCRBV7S2A1N4TA0A589 114 aa10.98□□□□□ -0.65
NPIPB3-210ENST00000542817 LRRD1A4D1F6 860 aa10.98□□□□□ -0.65
NPIPB3-210ENST00000542817 TCAF2A6NFQ2 919 aa10.98□□□□□ -0.65
NPIPB3-210ENST00000542817 MIF4GDA9UHW6 222 aaKnown RBP10.98□□□□□ -0.65
NPIPB3-210ENST00000542817 SPECC1L-ADORA2AF8WAN1 911 aa10.98□□□□□ -0.65
NPIPB3-210ENST00000542817 CLDN11O75508 207 aa10.98□□□□□ -0.65
NPIPB3-210ENST00000542817 ADH1CP00326 375 aa10.98□□□□□ -0.65
NPIPB3-210ENST00000542817 KRT1P04264 644 aa10.98□□□□□ -0.65
NPIPB3-210ENST00000542817 KRT10P13645 584 aa10.98□□□□□ -0.65
NPIPB3-210ENST00000542817 DESP17661 470 aa10.98□□□□□ -0.65
NPIPB3-210ENST00000542817 EPHB2P29323 1055 aa10.98□□□□□ -0.65
NPIPB3-210ENST00000542817 CTHP32929 405 aa10.98□□□□□ -0.65
NPIPB3-210ENST00000542817 HTR7P34969 479 aa10.98□□□□□ -0.65
NPIPB3-210ENST00000542817 CDH4P55283 916 aa10.98□□□□□ -0.65
NPIPB3-210ENST00000542817 AMPD2Q01433 879 aa10.98□□□□□ -0.65
NPIPB3-210ENST00000542817 DMTNQ08495 405 aa10.98□□□□□ -0.65
NPIPB3-210ENST00000542817 KLF1Q13351 362 aaPredicted RBP10.98□□□□□ -0.65
NPIPB3-210ENST00000542817 ZNF211Q13398 564 aaPredicted RBP10.98□□□□□ -0.65
NPIPB3-210ENST00000542817 FZD5Q13467 585 aa10.98□□□□□ -0.65
NPIPB3-210ENST00000542817 ANO4Q32M45 955 aa10.98□□□□□ -0.65
NPIPB3-210ENST00000542817 SLC44A4Q53GD3 710 aa10.98□□□□□ -0.65
NPIPB3-210ENST00000542817 RABGAP1LQ5R372 815 aa10.98□□□□□ -0.65
NPIPB3-210ENST00000542817 NCBP2-AS2Q69YL0 99 aa10.98□□□□□ -0.65
NPIPB3-210ENST00000542817 SLC9A4Q6AI14 798 aa10.98□□□□□ -0.65
NPIPB3-210ENST00000542817 RWDD4Q6NW29 188 aaKnown RBP10.98□□□□□ -0.65
NPIPB3-210ENST00000542817 SPOCD1Q6ZMY3 1216 aa10.98□□□□□ -0.65
NPIPB3-210ENST00000542817 TFAP2DQ7Z6R9 452 aa10.98□□□□□ -0.65
NPIPB3-210ENST00000542817 ADIPOR2Q86V24 386 aa10.98□□□□□ -0.65
NPIPB3-210ENST00000542817 UMODL1-AS1Q8N2C9 162 aa10.98□□□□□ -0.65
NPIPB3-210ENST00000542817 CPA6Q8N4T0 437 aa10.98□□□□□ -0.65
NPIPB3-210ENST00000542817 PLD5Q8N7P1 536 aa10.98□□□□□ -0.65
NPIPB3-210ENST00000542817 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.98□□□□□ -0.65
NPIPB3-210ENST00000542817 FIBINQ8TAL6 211 aa10.98□□□□□ -0.65
NPIPB3-210ENST00000542817 PSMB7Q99436 277 aa10.98□□□□□ -0.65
NPIPB3-210ENST00000542817 EPAS1Q99814 870 aa10.98□□□□□ -0.65
NPIPB3-210ENST00000542817 DDX50Q9BQ39 737 aaKnown RBP10.98□□□□□ -0.65
NPIPB3-210ENST00000542817 DDX56Q9NY93 547 aaKnown RBP10.98□□□□□ -0.65
NPIPB3-210ENST00000542817 SLC27A6Q9Y2P4 619 aa10.98□□□□□ -0.65
NPIPB3-210ENST00000542817 JRKLQ9Y4A0 524 aa10.98□□□□□ -0.65
NPIPB3-210ENST00000542817 VPS13AQ96RL7 3174 aa10.98□□□□□ -0.65
NPIPB3-210ENST00000542817 KIAA1549LQ6ZVL6 1849 aa10.97□□□□□ -0.65
NPIPB3-210ENST00000542817 A0A0D9SEW6 157 aa10.97□□□□□ -0.65
NPIPB3-210ENST00000542817 PRRT4C9JH25 899 aa10.97□□□□□ -0.65
NPIPB3-210ENST00000542817 H3BRJ5 948 aa10.97□□□□□ -0.65
NPIPB3-210ENST00000542817 KIF5CO60282 957 aa10.97□□□□□ -0.65
NPIPB3-210ENST00000542817 ZRANB2O95218 330 aaKnown RBP eCLIP10.97□□□□□ -0.65
NPIPB3-210ENST00000542817 CD160O95971 181 aa10.97□□□□□ -0.65
NPIPB3-210ENST00000542817 MZF1P28698 734 aaPredicted RBP10.97□□□□□ -0.65
NPIPB3-210ENST00000542817 DNA2P51530 1060 aa10.97□□□□□ -0.65
NPIPB3-210ENST00000542817 GALK1P51570 392 aa10.97□□□□□ -0.65
NPIPB3-210ENST00000542817 ZNF135P52742 658 aaPredicted RBP10.97□□□□□ -0.65
NPIPB3-210ENST00000542817 RWDD2BP57060 319 aa10.97□□□□□ -0.65
NPIPB3-210ENST00000542817 TPI1P60174 286 aa10.97□□□□□ -0.65
NPIPB3-210ENST00000542817 GNG11P61952 73 aa10.97□□□□□ -0.65
NPIPB3-210ENST00000542817 GBE1Q04446 702 aa10.97□□□□□ -0.65
NPIPB3-210ENST00000542817 LMAN2Q12907 356 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms