RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 PACS1Q6VY07 963 aa5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 TMC7Q7Z402 723 aa5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 ADGRG6Q86SQ4 1221 aa5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 SCUBE1Q8IWY4 988 aa5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 ULK2Q8IYT8 1036 aa5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 CCDC185Q8N715 623 aa5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 ZNF511Q8NB15 262 aa5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 PIWIL2Q8TC59 973 aaKnown RBP5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 CLEC4CQ8WTT0 213 aa5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 DEPDC1BQ8WUY9 529 aa5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 TFB1MQ8WVM0 346 aaKnown RBP5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 KBTBD7Q8WVZ9 684 aa5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 NT5C3BQ969T7 300 aa5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 IFT43Q96FT9 208 aa5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 HSFY1Q96LI6 401 aa5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 PANX3Q96QZ0 392 aa5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 SYT15Q9BQS2 421 aa5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 NAT9Q9BTE0 207 aa5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 RBCK1Q9BYM8 510 aa5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 MAGEB5Q9BZ81 275 aa5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 KATNBL1Q9H079 304 aa5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 ADAMTS10Q9H324 1103 aa5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 DHX35Q9H5Z1 703 aaKnown RBP5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 ELP3Q9H9T3 547 aa5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 XPNPEP3Q9NQH7 507 aa5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 FAM49BQ9NUQ9 324 aa5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 ZNF358Q9NW07 568 aa5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 DCDC2Q9UHG0 476 aa5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 FZD10Q9ULW2 581 aa5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 AKT3Q9Y243 479 aa5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 ASB3Q9Y575 518 aa5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 SNX9Q9Y5X1 595 aa5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 MAD1L1Q9Y6D9 718 aa5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 SCN1AP35498 2009 aa5.34□□□□□ -1.56
ATPAF1-212ENST00000542495 PDCD11Q14690 1871 aaKnown RBP5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 A0A088AWK7 358 aa5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 CCDC195A0A1B0GUA6 201 aa5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 WDR27A2RRH5 827 aa5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 PIRO00625 290 aa5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 TPP1O14773 563 aa5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 ITM2AO43736 263 aa5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 OPHN1O60890 802 aa5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 SKAP2O75563 359 aaPredicted RBP5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 NEBLO76041 1014 aa5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 TOP3BO95985 862 aaKnown RBP5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 SERPINE1P05121 402 aa5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 MYL4P12829 197 aa5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 ANPEPP15144 967 aa5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 GOT1P17174 413 aa5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 PGAM1P18669 254 aa5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 SP100P23497 879 aaPredicted RBP5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 GRK2P25098 689 aa5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 ARRB2P32121 409 aa5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 MATKP42679 507 aa5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 CPA2P48052 419 aa5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 IREB2P48200 963 aaKnown RBP5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 SLC1A6P48664 564 aa5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 HARS2P49590 506 aaKnown RBP5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 TUBP50607 506 aa5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 BCAT1P54687 386 aa5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 PCLAFQ15004 111 aa5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 PAFAH1B3Q15102 231 aaKnown RBP5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 AGERQ15109 404 aa5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 GSTA3Q16772 222 aa5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 ZNF792Q3KQV3 632 aa5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 SLC25A52Q3SY17 297 aa5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 GJC2Q5T442 439 aaPredicted RBP5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 LDLRAD1Q5T700 205 aa5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 N4BP2L1Q5TBK1 243 aaPredicted RBP5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 C9orf57Q5W0N0 161 aa5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 PGM2L1Q6PCE3 622 aa5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 AAGABQ6PD74 315 aa5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 ATG14Q6ZNE5 492 aa5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 RIPOR1Q6ZS17 1223 aa5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 DENND5BQ6ZUT9 1274 aa5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 ARMCX2Q7L311 632 aa5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 MAVSQ7Z434 540 aa5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 WDR75Q8IWA0 830 aaKnown RBP5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 KBTBD2Q8IY47 623 aa5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 UNC5BQ8IZJ1 945 aa5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 GATA6Q92908 595 aa5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 STMN2Q93045 179 aa5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 CLMNQ96JQ2 1002 aa5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 FAM161BQ96MY7 647 aa5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 PPP1R16BQ96T49 567 aa5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 SORT1Q99523 831 aa5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 ZNF184Q99676 751 aaPredicted RBP5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 LPIN3Q9BQK8 851 aa5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 EBF4Q9BQW3 602 aa5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 DPEP3Q9H4B8 488 aa5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 FAM96AQ9H5X1 160 aa5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 VTA1Q9NP79 307 aa5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 DNAJC28Q9NX36 388 aa5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 GDAP2Q9NXN4 497 aa5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 IGSF9Q9P2J2 1179 aa5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 TUBGCP4Q9UGJ1 667 aa5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 SLC7A8Q9UHI5 535 aa5.33□□□□□ -1.56
ATPAF1-212ENST00000542495 GJD2Q9UKL4 321 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms