RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 GABRB2P47870 512 aa15.7■□□□□ 0.1
CNOT9-208ENST00000542068 HDAC4P56524 1084 aa15.7■□□□□ 0.1
CNOT9-208ENST00000542068 CCDC185Q8N715 623 aa15.7■□□□□ 0.1
CNOT9-208ENST00000542068 ZFAND2BQ8WV99 257 aa15.7■□□□□ 0.1
CNOT9-208ENST00000542068 ZMAT2Q96NC0 199 aaKnown RBP15.7■□□□□ 0.1
CNOT9-208ENST00000542068 LENG8Q96PV6 779 aaPredicted RBP15.7■□□□□ 0.1
CNOT9-208ENST00000542068 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.7■□□□□ 0.1
CNOT9-208ENST00000542068 ASB14A6NK59 587 aa15.7■□□□□ 0.1
CNOT9-208ENST00000542068 CPA3P15088 417 aa15.7■□□□□ 0.1
CNOT9-208ENST00000542068 PSMB4P28070 264 aa15.7■□□□□ 0.1
CNOT9-208ENST00000542068 EPHA3P29320 983 aa15.7■□□□□ 0.1
CNOT9-208ENST00000542068 PAN2Q504Q3 1202 aaKnown RBP15.7■□□□□ 0.1
CNOT9-208ENST00000542068 TMEM198Q66K66 360 aa15.7■□□□□ 0.1
CNOT9-208ENST00000542068 ACAD11Q709F0 780 aa15.7■□□□□ 0.1
CNOT9-208ENST00000542068 CTU1Q7Z7A3 348 aaKnown RBP15.7■□□□□ 0.1
CNOT9-208ENST00000542068 ZSCAN18Q8TBC5 510 aaPredicted RBP15.7■□□□□ 0.1
CNOT9-208ENST00000542068 AGAP2Q99490 1192 aa15.7■□□□□ 0.1
CNOT9-208ENST00000542068 SORT1Q99523 831 aa15.7■□□□□ 0.1
CNOT9-208ENST00000542068 DMAP1Q9NPF5 467 aaPredicted RBP15.7■□□□□ 0.1
CNOT9-208ENST00000542068 AP4E1Q9UPM8 1137 aa15.7■□□□□ 0.1
CNOT9-208ENST00000542068 C15orf38-AP3S2A0A0A6YYH1 394 aa15.7■□□□□ 0.1
CNOT9-208ENST00000542068 A0A0G2JLL6 359 aaPredicted RBP15.7■□□□□ 0.1
CNOT9-208ENST00000542068 COX4I1P13073 169 aa15.7■□□□□ 0.1
CNOT9-208ENST00000542068 VAV1P15498 845 aa15.7■□□□□ 0.1
CNOT9-208ENST00000542068 SERPINB9P50453 376 aa15.7■□□□□ 0.1
CNOT9-208ENST00000542068 ABCE1P61221 599 aaKnown RBP15.7■□□□□ 0.1
CNOT9-208ENST00000542068 LAMC2Q13753 1193 aa15.7■□□□□ 0.1
CNOT9-208ENST00000542068 CNGA3Q16281 694 aa15.7■□□□□ 0.1
CNOT9-208ENST00000542068 RBM44Q6ZP01 1051 aaKnown RBP15.7■□□□□ 0.1
CNOT9-208ENST00000542068 ARPINQ7Z6K5 226 aa15.7■□□□□ 0.1
CNOT9-208ENST00000542068 PRRT2Q7Z6L0 340 aaPredicted RBP15.7■□□□□ 0.1
CNOT9-208ENST00000542068 SNX32Q86XE0 403 aa15.7■□□□□ 0.1
CNOT9-208ENST00000542068 GPRC5AQ8NFJ5 357 aa15.7■□□□□ 0.1
CNOT9-208ENST00000542068 SLC2A14Q8TDB8 520 aa15.7■□□□□ 0.1
CNOT9-208ENST00000542068 NAT14Q8WUY8 206 aa15.7■□□□□ 0.1
CNOT9-208ENST00000542068 CMTM5Q96DZ9 223 aa15.7■□□□□ 0.1
CNOT9-208ENST00000542068 CDRT15Q96T59 188 aa15.7■□□□□ 0.1
CNOT9-208ENST00000542068 GPAMQ9HCL2 828 aa15.7■□□□□ 0.1
CNOT9-208ENST00000542068 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.7■□□□□ 0.1
CNOT9-208ENST00000542068 UBP1Q9NZI7 540 aa15.7■□□□□ 0.1
CNOT9-208ENST00000542068 CITO14578 2027 aa15.7■□□□□ 0.1
CNOT9-208ENST00000542068 GLRA3O75311 464 aa15.69■□□□□ 0.1
CNOT9-208ENST00000542068 CHRNGP07510 517 aa15.69■□□□□ 0.1
CNOT9-208ENST00000542068 MCF2P10911 925 aa15.69■□□□□ 0.1
CNOT9-208ENST00000542068 TPH1P17752 444 aa15.69■□□□□ 0.1
CNOT9-208ENST00000542068 AVPR1AP37288 418 aa15.69■□□□□ 0.1
CNOT9-208ENST00000542068 ALDH1A3P47895 512 aa15.69■□□□□ 0.1
CNOT9-208ENST00000542068 NOL9Q5SY16 702 aaKnown RBP15.69■□□□□ 0.1
CNOT9-208ENST00000542068 IL31Q6EBC2 164 aa15.69■□□□□ 0.1
CNOT9-208ENST00000542068 NAPRTQ6XQN6 538 aa15.69■□□□□ 0.1
CNOT9-208ENST00000542068 SPATA6LQ8N4H0 392 aa15.69■□□□□ 0.1
CNOT9-208ENST00000542068 DNAAF3Q8N9W5 541 aa15.69■□□□□ 0.1
CNOT9-208ENST00000542068 DNAJB3Q8WWF6 145 aa15.69■□□□□ 0.1
CNOT9-208ENST00000542068 ZNF669Q96BR6 464 aaPredicted RBP15.69■□□□□ 0.1
CNOT9-208ENST00000542068 HIC2Q96JB3 615 aa15.69■□□□□ 0.1
CNOT9-208ENST00000542068 TSPAN1O60635 241 aa15.69■□□□□ 0.1
CNOT9-208ENST00000542068 TGM2P21980 687 aa15.69■□□□□ 0.1
CNOT9-208ENST00000542068 ARHGAP1Q07960 439 aa15.69■□□□□ 0.1
CNOT9-208ENST00000542068 DYNC1I2Q13409 638 aaKnown RBP15.69■□□□□ 0.1
CNOT9-208ENST00000542068 PDK2Q15119 407 aa15.69■□□□□ 0.1
CNOT9-208ENST00000542068 C9orf131Q5VYM1 1079 aa15.69■□□□□ 0.1
CNOT9-208ENST00000542068 KYAT3Q6YP21 454 aaKnown RBP15.69■□□□□ 0.1
CNOT9-208ENST00000542068 BCO2Q9BYV7 579 aa15.69■□□□□ 0.1
CNOT9-208ENST00000542068 SSX2IPQ9Y2D8 614 aa15.69■□□□□ 0.1
CNOT9-208ENST00000542068 BCLAF3A2AJT9 711 aaKnown RBP15.69■□□□□ 0.1
CNOT9-208ENST00000542068 BIRC5O15392 142 aa15.69■□□□□ 0.1
CNOT9-208ENST00000542068 RECQL4O94761 1208 aa15.69■□□□□ 0.1
CNOT9-208ENST00000542068 TLR1Q15399 786 aa15.69■□□□□ 0.1
CNOT9-208ENST00000542068 CYTH1Q15438 398 aa15.69■□□□□ 0.1
CNOT9-208ENST00000542068 TRIP11Q15643 1979 aa15.69■□□□□ 0.1
CNOT9-208ENST00000542068 SLC5A9Q2M3M2 681 aa15.69■□□□□ 0.1
CNOT9-208ENST00000542068 ARCQ7LC44 396 aa15.69■□□□□ 0.1
CNOT9-208ENST00000542068 PID1Q7Z2X4 250 aa15.69■□□□□ 0.1
CNOT9-208ENST00000542068 OR52K1Q8NGK4 314 aa15.69■□□□□ 0.1
CNOT9-208ENST00000542068 TMA16Q96EY4 203 aaKnown RBP15.69■□□□□ 0.1
CNOT9-208ENST00000542068 NUF2Q9BZD4 464 aa15.69■□□□□ 0.1
CNOT9-208ENST00000542068 DTLQ9NZJ0 730 aa15.69■□□□□ 0.1
CNOT9-208ENST00000542068 COPG2Q9UBF2 871 aa15.69■□□□□ 0.1
CNOT9-208ENST00000542068 PDHXO00330 501 aa15.68■□□□□ 0.1
CNOT9-208ENST00000542068 ENDOD1O94919 500 aa15.68■□□□□ 0.1
CNOT9-208ENST00000542068 LTFP02788 710 aa15.68■□□□□ 0.1
CNOT9-208ENST00000542068 MPSTP25325 297 aa15.68■□□□□ 0.1
CNOT9-208ENST00000542068 GNL1P36915 607 aaPredicted RBP15.68■□□□□ 0.1
CNOT9-208ENST00000542068 C6orf52Q5T4I8 152 aa15.68■□□□□ 0.1
CNOT9-208ENST00000542068 FAM91A1Q658Y4 838 aa15.68■□□□□ 0.1
CNOT9-208ENST00000542068 TWF2Q6IBS0 349 aaKnown RBP15.68■□□□□ 0.1
CNOT9-208ENST00000542068 FASTKD5Q7L8L6 764 aaKnown RBP15.68■□□□□ 0.1
CNOT9-208ENST00000542068 FBXW8Q8N3Y1 598 aa15.68■□□□□ 0.1
CNOT9-208ENST00000542068 DCLK2Q8N568 766 aa15.68■□□□□ 0.1
CNOT9-208ENST00000542068 SNX31Q8N9S9 440 aa15.68■□□□□ 0.1
CNOT9-208ENST00000542068 HTR3CQ8WXA8 447 aa15.68■□□□□ 0.1
CNOT9-208ENST00000542068 SCYL1Q96KG9 808 aa15.68■□□□□ 0.1
CNOT9-208ENST00000542068 LRGUKQ96M69 825 aa15.68■□□□□ 0.1
CNOT9-208ENST00000542068 CATSPER2Q96P56 530 aa15.68■□□□□ 0.1
CNOT9-208ENST00000542068 KCTD15Q96SI1 283 aaPredicted RBP15.68■□□□□ 0.1
CNOT9-208ENST00000542068 PRPF18Q99633 342 aaKnown RBP15.68■□□□□ 0.1
CNOT9-208ENST00000542068 ASB7Q9H672 318 aa15.68■□□□□ 0.1
CNOT9-208ENST00000542068 ARHGAP26Q9UNA1 814 aa15.68■□□□□ 0.1
CNOT9-208ENST00000542068 PPP2R3BQ9Y5P8 575 aa15.68■□□□□ 0.1
CNOT9-208ENST00000542068 IGKV6-21A0A0C4DH24 114 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms