RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 SNX17Q15036 470 aa9.38□□□□□ -0.91
THBS3-211ENST00000541990 PDK1Q15118 436 aa9.38□□□□□ -0.91
THBS3-211ENST00000541990 C6orf52Q5T4I8 152 aa9.38□□□□□ -0.91
THBS3-211ENST00000541990 TEDDM1Q5T9Z0 273 aa9.38□□□□□ -0.91
THBS3-211ENST00000541990 LRRC38Q5VT99 294 aa9.38□□□□□ -0.91
THBS3-211ENST00000541990 ATG16L1Q676U5 607 aa9.38□□□□□ -0.91
THBS3-211ENST00000541990 C1orf228Q6PIY5 440 aa9.38□□□□□ -0.91
THBS3-211ENST00000541990 BBS12Q6ZW61 710 aa9.38□□□□□ -0.91
THBS3-211ENST00000541990 ICA1LQ8NDH6 482 aa9.38□□□□□ -0.91
THBS3-211ENST00000541990 PIP4K2CQ8TBX8 421 aa9.38□□□□□ -0.91
THBS3-211ENST00000541990 SPATA18Q8TC71 538 aa9.38□□□□□ -0.91
THBS3-211ENST00000541990 VCPIP1Q96JH7 1222 aa9.38□□□□□ -0.91
THBS3-211ENST00000541990 CALN1Q9BXU9 219 aa9.38□□□□□ -0.91
THBS3-211ENST00000541990 TMEM134Q9H6X4 195 aa9.38□□□□□ -0.91
THBS3-211ENST00000541990 ACSS2Q9NR19 701 aa9.38□□□□□ -0.91
THBS3-211ENST00000541990 TUBGCP4Q9UGJ1 667 aa9.38□□□□□ -0.91
THBS3-211ENST00000541990 BLOC1S6Q9UL45 172 aa9.38□□□□□ -0.91
THBS3-211ENST00000541990 EMCNQ9ULC0 261 aa9.38□□□□□ -0.91
THBS3-211ENST00000541990 ZC3H11AO75152 810 aaKnown RBP eCLIP9.37□□□□□ -0.91
THBS3-211ENST00000541990 ADAMTS4O75173 837 aa9.37□□□□□ -0.91
THBS3-211ENST00000541990 RPL5P46777 297 aaKnown RBP9.37□□□□□ -0.91
THBS3-211ENST00000541990 EFNA5P52803 228 aa9.37□□□□□ -0.91
THBS3-211ENST00000541990 PTPN20Q4JDL3 420 aa9.37□□□□□ -0.91
THBS3-211ENST00000541990 FASTKD1Q53R41 847 aaKnown RBP9.37□□□□□ -0.91
THBS3-211ENST00000541990 OGFRL1Q5TC84 451 aaPredicted RBP9.37□□□□□ -0.91
THBS3-211ENST00000541990 SH3PXD2AQ5TCZ1 1133 aa9.37□□□□□ -0.91
THBS3-211ENST00000541990 TRIM72Q6ZMU5 477 aa9.37□□□□□ -0.91
THBS3-211ENST00000541990 TSHZ1Q6ZSZ6 1077 aa9.37□□□□□ -0.91
THBS3-211ENST00000541990 AMIGO2Q86SJ2 522 aa9.37□□□□□ -0.91
THBS3-211ENST00000541990 C1orf127Q8N9H9 656 aa9.37□□□□□ -0.91
THBS3-211ENST00000541990 TTC13Q8NBP0 860 aa9.37□□□□□ -0.91
THBS3-211ENST00000541990 GRIN3AQ8TCU5 1115 aa9.37□□□□□ -0.91
THBS3-211ENST00000541990 FAF2Q96CS3 445 aa9.37□□□□□ -0.91
THBS3-211ENST00000541990 MOCOSQ96EN8 888 aa9.37□□□□□ -0.91
THBS3-211ENST00000541990 ZNF512Q96ME7 567 aaPredicted RBP9.37□□□□□ -0.91
THBS3-211ENST00000541990 RPF1Q9H9Y2 349 aaKnown RBP9.37□□□□□ -0.91
THBS3-211ENST00000541990 RAB6BQ9NRW1 208 aa9.37□□□□□ -0.91
THBS3-211ENST00000541990 SIX4Q9UIU6 781 aa9.37□□□□□ -0.91
THBS3-211ENST00000541990 PCDHGA4Q9Y5G9 962 aa9.37□□□□□ -0.91
THBS3-211ENST00000541990 MAD1L1Q9Y6D9 718 aa9.37□□□□□ -0.91
THBS3-211ENST00000541990 CDY2AQ9Y6F7 541 aa9.37□□□□□ -0.91
THBS3-211ENST00000541990 STYXL1Q9Y6J8 313 aa9.37□□□□□ -0.91
THBS3-211ENST00000541990 NRCAMQ92823 1304 aa9.37□□□□□ -0.91
THBS3-211ENST00000541990 F8W810 466 aa9.37□□□□□ -0.91
THBS3-211ENST00000541990 BOLA2-SMG1P6H3BVE0 249 aa9.37□□□□□ -0.91
THBS3-211ENST00000541990 ZBTB14O43829 449 aa9.37□□□□□ -0.91
THBS3-211ENST00000541990 CHRNA1P02708 482 aa9.37□□□□□ -0.91
THBS3-211ENST00000541990 NCF2P19878 526 aaPredicted RBP9.37□□□□□ -0.91
THBS3-211ENST00000541990 EIF4BP23588 611 aaKnown RBP9.37□□□□□ -0.91
THBS3-211ENST00000541990 POLR2BP30876 1174 aaKnown RBP9.37□□□□□ -0.91
THBS3-211ENST00000541990 GRIA1P42261 906 aa9.37□□□□□ -0.91
THBS3-211ENST00000541990 ADARP55265 1226 aaKnown RBP9.37□□□□□ -0.91
THBS3-211ENST00000541990 ZNF618Q5T7W0 954 aa9.37□□□□□ -0.91
THBS3-211ENST00000541990 KBTBD6Q86V97 674 aa9.37□□□□□ -0.91
THBS3-211ENST00000541990 CAND1Q86VP6 1230 aaKnown RBP9.37□□□□□ -0.91
THBS3-211ENST00000541990 RNF148Q8N7C7 305 aa9.37□□□□□ -0.91
THBS3-211ENST00000541990 HASPINQ8TF76 798 aa9.37□□□□□ -0.91
THBS3-211ENST00000541990 TMIGD2Q96BF3 282 aa9.37□□□□□ -0.91
THBS3-211ENST00000541990 EPB41L1Q9H4G0 881 aa9.37□□□□□ -0.91
THBS3-211ENST00000541990 PIH1D1Q9NWS0 290 aaKnown RBP9.37□□□□□ -0.91
THBS3-211ENST00000541990 ARHGEF38Q9NXL2 777 aa9.37□□□□□ -0.91
THBS3-211ENST00000541990 ZC3H7BQ9UGR2 993 aaKnown RBP9.37□□□□□ -0.91
THBS3-211ENST00000541990 NR2E3Q9Y5X4 410 aa9.37□□□□□ -0.91
THBS3-211ENST00000541990 AP4B1Q9Y6B7 739 aa9.37□□□□□ -0.91
THBS3-211ENST00000541990 CASQ2O14958 399 aaPredicted RBP9.36□□□□□ -0.91
THBS3-211ENST00000541990 IGHA2P01877 340 aa9.36□□□□□ -0.91
THBS3-211ENST00000541990 FGF3P11487 239 aaPredicted RBP9.36□□□□□ -0.91
THBS3-211ENST00000541990 DESP17661 470 aa9.36□□□□□ -0.91
THBS3-211ENST00000541990 IDH3AP50213 366 aa9.36□□□□□ -0.91
THBS3-211ENST00000541990 SNRPFP62306 86 aaKnown RBP9.36□□□□□ -0.91
THBS3-211ENST00000541990 MRPS22P82650 360 aaKnown RBP9.36□□□□□ -0.91
THBS3-211ENST00000541990 WASHC5Q12768 1159 aa9.36□□□□□ -0.91
THBS3-211ENST00000541990 PPM1LQ5SGD2 360 aa9.36□□□□□ -0.91
THBS3-211ENST00000541990 MBLAC2Q68D91 279 aa9.36□□□□□ -0.91
THBS3-211ENST00000541990 TWF2Q6IBS0 349 aaKnown RBP9.36□□□□□ -0.91
THBS3-211ENST00000541990 SLFN12LQ6IEE8 588 aa9.36□□□□□ -0.91
THBS3-211ENST00000541990 DENND1BQ6P3S1 775 aa9.36□□□□□ -0.91
THBS3-211ENST00000541990 DARS2Q6PI48 645 aaKnown RBP9.36□□□□□ -0.91
THBS3-211ENST00000541990 UNC5AQ6ZN44 842 aa9.36□□□□□ -0.91
THBS3-211ENST00000541990 BRSK2Q8IWQ3 736 aa9.36□□□□□ -0.91
THBS3-211ENST00000541990 LILRA2Q8N149 483 aa9.36□□□□□ -0.91
THBS3-211ENST00000541990 GALNT4Q8N4A0 578 aa9.36□□□□□ -0.91
THBS3-211ENST00000541990 MARVELD2Q8N4S9 558 aa9.36□□□□□ -0.91
THBS3-211ENST00000541990 PPP1R14CQ8TAE6 165 aa9.36□□□□□ -0.91
THBS3-211ENST00000541990 AGR3Q8TD06 166 aa9.36□□□□□ -0.91
THBS3-211ENST00000541990 ACTRT2Q8TDY3 377 aa9.36□□□□□ -0.91
THBS3-211ENST00000541990 KIF12Q96FN5 646 aa9.36□□□□□ -0.91
THBS3-211ENST00000541990 PGLYRP2Q96PD5 576 aa9.36□□□□□ -0.91
THBS3-211ENST00000541990 TWNKQ96RR1 684 aa9.36□□□□□ -0.91
THBS3-211ENST00000541990 PEBP4Q96S96 227 aa9.36□□□□□ -0.91
THBS3-211ENST00000541990 MRPL1Q9BYD6 325 aaKnown RBP9.36□□□□□ -0.91
THBS3-211ENST00000541990 SDCBP2Q9H190 292 aa9.36□□□□□ -0.91
THBS3-211ENST00000541990 UNC93B1Q9H1C4 597 aa9.36□□□□□ -0.91
THBS3-211ENST00000541990 HAS3O00219 553 aa9.36□□□□□ -0.91
THBS3-211ENST00000541990 DCXO43602 365 aa9.36□□□□□ -0.91
THBS3-211ENST00000541990 AP1G1O43747 822 aa9.36□□□□□ -0.91
THBS3-211ENST00000541990 KRT37O76014 449 aa9.36□□□□□ -0.91
THBS3-211ENST00000541990 HNRNPCP07910 306 aaKnown RBP eCLIP9.36□□□□□ -0.91
THBS3-211ENST00000541990 HOXD8P13378 290 aaPredicted RBP9.36□□□□□ -0.91
THBS3-211ENST00000541990 DARSP14868 501 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms