RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 PISDQ9UG56 409 aa9.85□□□□□ -0.83
YBX3-211ENST00000541351 SIX4Q9UIU6 781 aa9.85□□□□□ -0.83
YBX3-211ENST00000541351 NAGPAQ9UK23 515 aa9.85□□□□□ -0.83
YBX3-211ENST00000541351 GTF3C3Q9Y5Q9 886 aa9.85□□□□□ -0.83
YBX3-211ENST00000541351 ABCA2Q9BZC7 2435 aa9.84□□□□□ -0.83
YBX3-211ENST00000541351 LY6G6EA0A0G2JKS1 128 aa9.84□□□□□ -0.83
YBX3-211ENST00000541351 TYW5A2RUC4 315 aaKnown RBP9.84□□□□□ -0.83
YBX3-211ENST00000541351 PRR19A6NJB7 356 aa9.84□□□□□ -0.83
YBX3-211ENST00000541351 EFCAB7A8K855 629 aa9.84□□□□□ -0.83
YBX3-211ENST00000541351 C10orf142B7Z368 130 aa9.84□□□□□ -0.83
YBX3-211ENST00000541351 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.84□□□□□ -0.83
YBX3-211ENST00000541351 HNRNPRO43390 633 aaKnown RBP9.84□□□□□ -0.83
YBX3-211ENST00000541351 SLC26A4O43511 780 aa9.84□□□□□ -0.83
YBX3-211ENST00000541351 SIN3BO75182 1162 aa9.84□□□□□ -0.83
YBX3-211ENST00000541351 SLFN14P0C7P3 912 aa9.84□□□□□ -0.83
YBX3-211ENST00000541351 GARTP22102 1010 aa9.84□□□□□ -0.83
YBX3-211ENST00000541351 MAT2AP31153 395 aaKnown RBP9.84□□□□□ -0.83
YBX3-211ENST00000541351 CCKBRP32239 447 aa9.84□□□□□ -0.83
YBX3-211ENST00000541351 NNMTP40261 264 aa9.84□□□□□ -0.83
YBX3-211ENST00000541351 PRPHP41219 470 aa9.84□□□□□ -0.83
YBX3-211ENST00000541351 SRSF6Q13247 344 aaKnown RBP9.84□□□□□ -0.83
YBX3-211ENST00000541351 ANKRD1Q15327 319 aa9.84□□□□□ -0.83
YBX3-211ENST00000541351 C1QL3Q5VWW1 255 aa9.84□□□□□ -0.83
YBX3-211ENST00000541351 RNF219Q5W0B1 726 aaPredicted RBP9.84□□□□□ -0.83
YBX3-211ENST00000541351 ESRP1Q6NXG1 681 aaKnown RBP9.84□□□□□ -0.83
YBX3-211ENST00000541351 RSRC2Q7L4I2 434 aaKnown RBP9.84□□□□□ -0.83
YBX3-211ENST00000541351 ADIPOR2Q86V24 386 aa9.84□□□□□ -0.83
YBX3-211ENST00000541351 GPBP1Q86WP2 473 aa9.84□□□□□ -0.83
YBX3-211ENST00000541351 DTX1Q86Y01 620 aa9.84□□□□□ -0.83
YBX3-211ENST00000541351 ARHGAP18Q8N392 663 aa9.84□□□□□ -0.83
YBX3-211ENST00000541351 IL22RA1Q8N6P7 574 aa9.84□□□□□ -0.83
YBX3-211ENST00000541351 APOBEC4Q8WW27 367 aaKnown RBP9.84□□□□□ -0.83
YBX3-211ENST00000541351 PLD4Q96BZ4 506 aa9.84□□□□□ -0.83
YBX3-211ENST00000541351 TMA16Q96EY4 203 aaKnown RBP9.84□□□□□ -0.83
YBX3-211ENST00000541351 CGRRF1Q99675 332 aa9.84□□□□□ -0.83
YBX3-211ENST00000541351 CCDC3Q9BQI4 270 aa9.84□□□□□ -0.83
YBX3-211ENST00000541351 MRPL45Q9BRJ2 306 aaKnown RBP9.84□□□□□ -0.83
YBX3-211ENST00000541351 LARP6Q9BRS8 491 aaKnown RBP9.84□□□□□ -0.83
YBX3-211ENST00000541351 EFHD1Q9BUP0 239 aa9.84□□□□□ -0.83
YBX3-211ENST00000541351 DNAI2Q9GZS0 605 aa9.84□□□□□ -0.83
YBX3-211ENST00000541351 FOXP1Q9H334 677 aaPredicted RBP9.84□□□□□ -0.83
YBX3-211ENST00000541351 PREBQ9HCU5 417 aa9.84□□□□□ -0.83
YBX3-211ENST00000541351 PDRG1Q9NUG6 133 aa9.84□□□□□ -0.83
YBX3-211ENST00000541351 TMEM30AQ9NV96 361 aa9.84□□□□□ -0.83
YBX3-211ENST00000541351 CLIC5Q9NZA1 410 aa9.84□□□□□ -0.83
YBX3-211ENST00000541351 ARHGAP20Q9P2F6 1191 aa9.84□□□□□ -0.83
YBX3-211ENST00000541351 RASAL2Q9UJF2 1139 aa9.84□□□□□ -0.83
YBX3-211ENST00000541351 AGO1Q9UL18 857 aaKnown RBP9.84□□□□□ -0.83
YBX3-211ENST00000541351 U3KQA8 63 aa9.84□□□□□ -0.83
YBX3-211ENST00000541351 MED13Q9UHV7 2174 aa9.83□□□□□ -0.84
YBX3-211ENST00000541351 MUSKO15146 869 aa9.83□□□□□ -0.84
YBX3-211ENST00000541351 MOCS3O95396 460 aa9.83□□□□□ -0.84
YBX3-211ENST00000541351 IL1BP01584 269 aa9.83□□□□□ -0.84
YBX3-211ENST00000541351 KLKB1P03952 638 aa9.83□□□□□ -0.84
YBX3-211ENST00000541351 PRKCGP05129 697 aa9.83□□□□□ -0.84
YBX3-211ENST00000541351 SRPRAP08240 638 aaKnown RBP9.83□□□□□ -0.84
YBX3-211ENST00000541351 GIMD1P0DJR0 217 aa9.83□□□□□ -0.84
YBX3-211ENST00000541351 GNLYP22749 145 aa9.83□□□□□ -0.84
YBX3-211ENST00000541351 HOXD9P28356 352 aaPredicted RBP9.83□□□□□ -0.84
YBX3-211ENST00000541351 COPB1P53618 953 aaKnown RBP9.83□□□□□ -0.84
YBX3-211ENST00000541351 PPP2CBP62714 309 aa9.83□□□□□ -0.84
YBX3-211ENST00000541351 PPP2CAP67775 309 aa9.83□□□□□ -0.84
YBX3-211ENST00000541351 EHHADHQ08426 723 aa9.83□□□□□ -0.84
YBX3-211ENST00000541351 ELAVL3Q14576 367 aaKnown RBP9.83□□□□□ -0.84
YBX3-211ENST00000541351 WDR72Q3MJ13 1102 aa9.83□□□□□ -0.84
YBX3-211ENST00000541351 NEK5Q6P3R8 708 aa9.83□□□□□ -0.84
YBX3-211ENST00000541351 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.83□□□□□ -0.84
YBX3-211ENST00000541351 KCNK18Q7Z418 384 aa9.83□□□□□ -0.84
YBX3-211ENST00000541351 KIAA0907Q7Z7F0 614 aaPredicted RBP9.83□□□□□ -0.84
YBX3-211ENST00000541351 FAM217AQ8IXS0 508 aa9.83□□□□□ -0.84
YBX3-211ENST00000541351 OR6C4Q8NGE1 309 aa9.83□□□□□ -0.84
YBX3-211ENST00000541351 NOC3LQ8WTT2 800 aaKnown RBP9.83□□□□□ -0.84
YBX3-211ENST00000541351 BTN2A2Q8WVV5 523 aa9.83□□□□□ -0.84
YBX3-211ENST00000541351 SLC29A3Q9BZD2 475 aa9.83□□□□□ -0.84
YBX3-211ENST00000541351 PDE11AQ9HCR9 933 aa9.83□□□□□ -0.84
YBX3-211ENST00000541351 PNPLA8Q9NP80 782 aa9.83□□□□□ -0.84
YBX3-211ENST00000541351 LOXL2Q9Y4K0 774 aa9.83□□□□□ -0.84
YBX3-211ENST00000541351 PRAMEF33A0A0G2JMD5 474 aa9.82□□□□□ -0.84
YBX3-211ENST00000541351 A0A1W2PQH9 124 aa9.82□□□□□ -0.84
YBX3-211ENST00000541351 PMS2P1A4D2B8 440 aa9.82□□□□□ -0.84
YBX3-211ENST00000541351 A6NNZ2 444 aa9.82□□□□□ -0.84
YBX3-211ENST00000541351 TTLL8A6PVC2 850 aa9.82□□□□□ -0.84
YBX3-211ENST00000541351 NTN3O00634 580 aaPredicted RBP9.82□□□□□ -0.84
YBX3-211ENST00000541351 AQP9O43315 295 aa9.82□□□□□ -0.84
YBX3-211ENST00000541351 EPB41L2O43491 1005 aaKnown RBP9.82□□□□□ -0.84
YBX3-211ENST00000541351 PLRG1O43660 514 aaKnown RBP9.82□□□□□ -0.84
YBX3-211ENST00000541351 PRAMEF10O60809 474 aa9.82□□□□□ -0.84
YBX3-211ENST00000541351 CLSTN1O94985 981 aa9.82□□□□□ -0.84
YBX3-211ENST00000541351 LATS1O95835 1130 aa9.82□□□□□ -0.84
YBX3-211ENST00000541351 FAM200BP0CF97 657 aa9.82□□□□□ -0.84
YBX3-211ENST00000541351 VARSP26640 1264 aaKnown RBP9.82□□□□□ -0.84
YBX3-211ENST00000541351 MLLT10P55197 1068 aa9.82□□□□□ -0.84
YBX3-211ENST00000541351 MC1RQ01726 317 aa9.82□□□□□ -0.84
YBX3-211ENST00000541351 TRPC3Q13507 836 aa9.82□□□□□ -0.84
YBX3-211ENST00000541351 POM121L1PQ3SYA9 428 aa9.82□□□□□ -0.84
YBX3-211ENST00000541351 MPP7Q5T2T1 576 aa9.82□□□□□ -0.84
YBX3-211ENST00000541351 PARGQ86W56 976 aa9.82□□□□□ -0.84
YBX3-211ENST00000541351 WDR49Q8IV35 697 aa9.82□□□□□ -0.84
YBX3-211ENST00000541351 SYCP3Q8IZU3 236 aa9.82□□□□□ -0.84
YBX3-211ENST00000541351 TMEM145Q8NBT3 493 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms