RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 DDX50Q9BQ39 737 aaKnown RBP9.78□□□□□ -0.84
CNOT4-212ENST00000541284 PLEKHA5Q9HAU0 1116 aa9.78□□□□□ -0.84
CNOT4-212ENST00000541284 IGSF9Q9P2J2 1179 aa9.78□□□□□ -0.84
CNOT4-212ENST00000541284 FAM72CH0Y354 149 aa9.78□□□□□ -0.84
CNOT4-212ENST00000541284 GPR32O75388 356 aa9.78□□□□□ -0.84
CNOT4-212ENST00000541284 GNAT1P11488 350 aa9.78□□□□□ -0.84
CNOT4-212ENST00000541284 MLH1P40692 756 aa9.78□□□□□ -0.84
CNOT4-212ENST00000541284 MATKP42679 507 aa9.78□□□□□ -0.84
CNOT4-212ENST00000541284 SESN2P58004 480 aaPredicted RBP9.78□□□□□ -0.84
CNOT4-212ENST00000541284 ABCE1P61221 599 aaKnown RBP9.78□□□□□ -0.84
CNOT4-212ENST00000541284 IRF9Q00978 393 aa9.78□□□□□ -0.84
CNOT4-212ENST00000541284 FRG1Q14331 258 aaKnown RBP9.78□□□□□ -0.84
CNOT4-212ENST00000541284 FAM72AQ5TYM5 149 aa9.78□□□□□ -0.84
CNOT4-212ENST00000541284 C9orf131Q5VYM1 1079 aa9.78□□□□□ -0.84
CNOT4-212ENST00000541284 FAM72DQ6L9T8 149 aa9.78□□□□□ -0.84
CNOT4-212ENST00000541284 EPGNQ6UW88 154 aa9.78□□□□□ -0.84
CNOT4-212ENST00000541284 OSTM1Q86WC4 334 aa9.78□□□□□ -0.84
CNOT4-212ENST00000541284 FAM72BQ86X60 149 aa9.78□□□□□ -0.84
CNOT4-212ENST00000541284 PYDC1Q8WXC3 89 aa9.78□□□□□ -0.84
CNOT4-212ENST00000541284 NPY6RQ99463 290 aa9.78□□□□□ -0.84
CNOT4-212ENST00000541284 ZNF385DQ9H6B1 395 aa9.78□□□□□ -0.84
CNOT4-212ENST00000541284 SNX15Q9NRS6 342 aa9.78□□□□□ -0.84
CNOT4-212ENST00000541284 DCDC2Q9UHG0 476 aa9.78□□□□□ -0.84
CNOT4-212ENST00000541284 CDH22Q9UJ99 828 aa9.78□□□□□ -0.84
CNOT4-212ENST00000541284 PCDHB12Q9Y5F1 795 aa9.78□□□□□ -0.84
CNOT4-212ENST00000541284 A6NJR5 290 aa9.78□□□□□ -0.84
CNOT4-212ENST00000541284 OPHN1O60890 802 aa9.78□□□□□ -0.84
CNOT4-212ENST00000541284 GLDCP23378 1020 aa9.78□□□□□ -0.84
CNOT4-212ENST00000541284 ADORA2BP29275 332 aa9.78□□□□□ -0.84
CNOT4-212ENST00000541284 CD68P34810 354 aaPredicted RBP9.78□□□□□ -0.84
CNOT4-212ENST00000541284 EPHX2P34913 555 aa9.78□□□□□ -0.84
CNOT4-212ENST00000541284 BCAT1P54687 386 aa9.78□□□□□ -0.84
CNOT4-212ENST00000541284 DSG1Q02413 1049 aa9.78□□□□□ -0.84
CNOT4-212ENST00000541284 SOX4Q06945 474 aaPredicted RBP9.78□□□□□ -0.84
CNOT4-212ENST00000541284 HIC1Q14526 733 aa9.78□□□□□ -0.84
CNOT4-212ENST00000541284 SLC25A52Q3SY17 297 aa9.78□□□□□ -0.84
CNOT4-212ENST00000541284 SLC9B1Q4ZJI4 515 aa9.78□□□□□ -0.84
CNOT4-212ENST00000541284 EFHC1Q5JVL4 640 aa9.78□□□□□ -0.84
CNOT4-212ENST00000541284 GLRA4Q5JXX5 417 aa9.78□□□□□ -0.84
CNOT4-212ENST00000541284 ARTNQ5T4W7 220 aa9.78□□□□□ -0.84
CNOT4-212ENST00000541284 C1orf146Q5VVC0 180 aa9.78□□□□□ -0.84
CNOT4-212ENST00000541284 TMEM135Q86UB9 458 aa9.78□□□□□ -0.84
CNOT4-212ENST00000541284 DEFB106AQ8N104 65 aa9.78□□□□□ -0.84
CNOT4-212ENST00000541284 GALNT15Q8N3T1 639 aa9.78□□□□□ -0.84
CNOT4-212ENST00000541284 DCLK2Q8N568 766 aa9.78□□□□□ -0.84
CNOT4-212ENST00000541284 CERS2Q96G23 380 aa9.78□□□□□ -0.84
CNOT4-212ENST00000541284 RILPQ96NA2 401 aa9.78□□□□□ -0.84
CNOT4-212ENST00000541284 TRAPPC9Q96Q05 1148 aa9.78□□□□□ -0.84
CNOT4-212ENST00000541284 RBBP8Q99708 897 aa9.78□□□□□ -0.84
CNOT4-212ENST00000541284 CASQ2O14958 399 aaPredicted RBP9.77□□□□□ -0.85
CNOT4-212ENST00000541284 FKBP6O75344 327 aa9.77□□□□□ -0.85
CNOT4-212ENST00000541284 PDE5AO76074 875 aa9.77□□□□□ -0.85
CNOT4-212ENST00000541284 UBTFL6P0CB48 400 aaPredicted RBP9.77□□□□□ -0.85
CNOT4-212ENST00000541284 IREB2P48200 963 aaKnown RBP9.77□□□□□ -0.85
CNOT4-212ENST00000541284 GRM2Q14416 872 aa9.77□□□□□ -0.85
CNOT4-212ENST00000541284 XKR4Q5GH76 650 aa9.77□□□□□ -0.85
CNOT4-212ENST00000541284 CWF19L1Q69YN2 538 aaKnown RBP9.77□□□□□ -0.85
CNOT4-212ENST00000541284 DHDDSQ86SQ9 333 aa9.77□□□□□ -0.85
CNOT4-212ENST00000541284 PSTKQ8IV42 348 aaKnown RBP9.77□□□□□ -0.85
CNOT4-212ENST00000541284 HACE1Q8IYU2 909 aa9.77□□□□□ -0.85
CNOT4-212ENST00000541284 ZNF781Q8N8C0 355 aa9.77□□□□□ -0.85
CNOT4-212ENST00000541284 RNF139Q8WU17 664 aa9.77□□□□□ -0.85
CNOT4-212ENST00000541284 NLRP7Q8WX94 980 aa9.77□□□□□ -0.85
CNOT4-212ENST00000541284 NCSTNQ92542 709 aa9.77□□□□□ -0.85
CNOT4-212ENST00000541284 AGAP2Q99490 1192 aa9.77□□□□□ -0.85
CNOT4-212ENST00000541284 MLPHQ9BV36 600 aaPredicted RBP9.77□□□□□ -0.85
CNOT4-212ENST00000541284 NXF3Q9H4D5 531 aaKnown RBP9.77□□□□□ -0.85
CNOT4-212ENST00000541284 PRDM12Q9H4Q4 367 aa9.77□□□□□ -0.85
CNOT4-212ENST00000541284 NDE1Q9NXR1 346 aa9.77□□□□□ -0.85
CNOT4-212ENST00000541284 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.77□□□□□ -0.85
CNOT4-212ENST00000541284 E2F8A0AVK6 867 aa9.77□□□□□ -0.85
CNOT4-212ENST00000541284 DAB1O75553 588 aa9.77□□□□□ -0.85
CNOT4-212ENST00000541284 AP2B1P63010 937 aa9.77□□□□□ -0.85
CNOT4-212ENST00000541284 FKBP1BP68106 108 aa9.77□□□□□ -0.85
CNOT4-212ENST00000541284 LAMC2Q13753 1193 aa9.77□□□□□ -0.85
CNOT4-212ENST00000541284 KCTD2Q14681 263 aa9.77□□□□□ -0.85
CNOT4-212ENST00000541284 DLG2Q15700 870 aa9.77□□□□□ -0.85
CNOT4-212ENST00000541284 KIAA0319Q5VV43 1072 aa9.77□□□□□ -0.85
CNOT4-212ENST00000541284 SYPL2Q5VXT5 272 aa9.77□□□□□ -0.85
CNOT4-212ENST00000541284 PDPK2PQ6A1A2 396 aa9.77□□□□□ -0.85
CNOT4-212ENST00000541284 HFE2Q6ZVN8 426 aa9.77□□□□□ -0.85
CNOT4-212ENST00000541284 WDR75Q8IWA0 830 aaKnown RBP9.77□□□□□ -0.85
CNOT4-212ENST00000541284 NPWQ8N729 165 aa9.77□□□□□ -0.85
CNOT4-212ENST00000541284 SLC2A14Q8TDB8 520 aa9.77□□□□□ -0.85
CNOT4-212ENST00000541284 ZFAND2BQ8WV99 257 aa9.77□□□□□ -0.85
CNOT4-212ENST00000541284 MOCOSQ96EN8 888 aa9.77□□□□□ -0.85
CNOT4-212ENST00000541284 SLC2A13Q96QE2 648 aa9.77□□□□□ -0.85
CNOT4-212ENST00000541284 TTC1Q99614 292 aa9.77□□□□□ -0.85
CNOT4-212ENST00000541284 C1QTNF1Q9BXJ1 281 aa9.77□□□□□ -0.85
CNOT4-212ENST00000541284 GDAP2Q9NXN4 497 aa9.77□□□□□ -0.85
CNOT4-212ENST00000541284 POMPQ9Y244 141 aa9.77□□□□□ -0.85
CNOT4-212ENST00000541284 HAS3O00219 553 aa9.76□□□□□ -0.85
CNOT4-212ENST00000541284 LTFP02788 710 aa9.76□□□□□ -0.85
CNOT4-212ENST00000541284 PDGFRBP09619 1106 aa9.76□□□□□ -0.85
CNOT4-212ENST00000541284 GRK2P25098 689 aa9.76□□□□□ -0.85
CNOT4-212ENST00000541284 GP5P40197 560 aa9.76□□□□□ -0.85
CNOT4-212ENST00000541284 LIMK2P53671 638 aa9.76□□□□□ -0.85
CNOT4-212ENST00000541284 DEUP1Q05D60 604 aa9.76□□□□□ -0.85
CNOT4-212ENST00000541284 USP4Q13107 963 aa9.76□□□□□ -0.85
CNOT4-212ENST00000541284 ITGA9Q13797 1035 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms