RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 HUS1O60921 280 aa4.88□□□□□ -1.63
SNHG1-214ENST00000540865 HTR3BO95264 441 aa4.88□□□□□ -1.63
SNHG1-214ENST00000540865 LDOC1O95751 146 aaPredicted RBP4.88□□□□□ -1.63
SNHG1-214ENST00000540865 IGLV3-19P01714 112 aa4.88□□□□□ -1.63
SNHG1-214ENST00000540865 MBL2P11226 248 aaPredicted RBP4.88□□□□□ -1.63
SNHG1-214ENST00000540865 ACAT1P24752 427 aaKnown RBP4.88□□□□□ -1.63
SNHG1-214ENST00000540865 PCSK1P29120 753 aa4.88□□□□□ -1.63
SNHG1-214ENST00000540865 LHX1P48742 406 aa4.88□□□□□ -1.63
SNHG1-214ENST00000540865 CSNK1EP49674 416 aaKnown RBP4.88□□□□□ -1.63
SNHG1-214ENST00000540865 NCKAP1LP55160 1127 aa4.88□□□□□ -1.63
SNHG1-214ENST00000540865 CCDC173Q0VFZ6 552 aa4.88□□□□□ -1.63
SNHG1-214ENST00000540865 ILKQ13418 452 aa4.88□□□□□ -1.63
SNHG1-214ENST00000540865 STARD3Q14849 445 aa4.88□□□□□ -1.63
SNHG1-214ENST00000540865 MAPRE1Q15691 268 aaKnown RBP4.88□□□□□ -1.63
SNHG1-214ENST00000540865 COLEC12Q5KU26 742 aa4.88□□□□□ -1.63
SNHG1-214ENST00000540865 PRAMEF13Q5VWM6 474 aa4.88□□□□□ -1.63
SNHG1-214ENST00000540865 GRAMD4Q6IC98 578 aa4.88□□□□□ -1.63
SNHG1-214ENST00000540865 FAM171BQ6P995 826 aa4.88□□□□□ -1.63
SNHG1-214ENST00000540865 C4orf50Q6ZRC1 276 aa4.88□□□□□ -1.63
SNHG1-214ENST00000540865 ZNF765Q7L2R6 523 aa4.88□□□□□ -1.63
SNHG1-214ENST00000540865 ERICH1Q86X53 443 aa4.88□□□□□ -1.63
SNHG1-214ENST00000540865 TMEM25Q86YD3 366 aa4.88□□□□□ -1.63
SNHG1-214ENST00000540865 HID1Q8IV36 788 aa4.88□□□□□ -1.63
SNHG1-214ENST00000540865 SCN4BQ8IWT1 228 aa4.88□□□□□ -1.63
SNHG1-214ENST00000540865 TOP6BLQ8N6T0 577 aa4.88□□□□□ -1.63
SNHG1-214ENST00000540865 ZNF248Q8NDW4 579 aa4.88□□□□□ -1.63
SNHG1-214ENST00000540865 SNRNP27Q8WVK2 155 aaKnown RBP4.88□□□□□ -1.63
SNHG1-214ENST00000540865 SCFD1Q8WVM8 642 aa4.88□□□□□ -1.63
SNHG1-214ENST00000540865 ZNF560Q96MR9 790 aa4.88□□□□□ -1.63
SNHG1-214ENST00000540865 XPO6Q96QU8 1125 aaKnown RBP4.88□□□□□ -1.63
SNHG1-214ENST00000540865 ACOX2Q99424 681 aa4.88□□□□□ -1.63
SNHG1-214ENST00000540865 LGMNQ99538 433 aa4.88□□□□□ -1.63
SNHG1-214ENST00000540865 MSTO1Q9BUK6 570 aa4.88□□□□□ -1.63
SNHG1-214ENST00000540865 NUP58Q9BVL2 599 aa4.88□□□□□ -1.63
SNHG1-214ENST00000540865 TM6SF1Q9BZW5 370 aa4.88□□□□□ -1.63
SNHG1-214ENST00000540865 SLC6A17Q9H1V8 727 aa4.88□□□□□ -1.63
SNHG1-214ENST00000540865 SPHK2Q9NRA0 654 aa4.88□□□□□ -1.63
SNHG1-214ENST00000540865 SMPD4Q9NXE4 827 aa4.88□□□□□ -1.63
SNHG1-214ENST00000540865 DDX43Q9NXZ2 648 aaKnown RBP4.88□□□□□ -1.63
SNHG1-214ENST00000540865 MAGEC2Q9UBF1 373 aaPredicted RBP4.88□□□□□ -1.63
SNHG1-214ENST00000540865 KLHL3Q9UH77 587 aa4.88□□□□□ -1.63
SNHG1-214ENST00000540865 EIF2B4Q9UI10 523 aaKnown RBP4.88□□□□□ -1.63
SNHG1-214ENST00000540865 L1RE1Q9UN81 338 aa4.88□□□□□ -1.63
SNHG1-214ENST00000540865 ANKRD6Q9Y2G4 727 aa4.88□□□□□ -1.63
SNHG1-214ENST00000540865 SNX11Q9Y5W9 270 aa4.88□□□□□ -1.63
SNHG1-214ENST00000540865 RAD54BQ9Y620 910 aa4.88□□□□□ -1.63
SNHG1-214ENST00000540865 TLN1Q9Y490 2541 aaKnown RBP4.87□□□□□ -1.63
SNHG1-214ENST00000540865 USP9YO00507 2555 aaPredicted RBP4.87□□□□□ -1.63
SNHG1-214ENST00000540865 AHCTF1Q8WYP5 2266 aa4.87□□□□□ -1.63
SNHG1-214ENST00000540865 KCNJ18B7U540 433 aa4.87□□□□□ -1.63
SNHG1-214ENST00000540865 H0Y8X5 98 aa4.87□□□□□ -1.63
SNHG1-214ENST00000540865 LAD1O00515 517 aa4.87□□□□□ -1.63
SNHG1-214ENST00000540865 TRIM24O15164 1050 aa4.87□□□□□ -1.63
SNHG1-214ENST00000540865 CACNG3O60359 315 aa4.87□□□□□ -1.63
SNHG1-214ENST00000540865 CTDNEP1O95476 244 aa4.87□□□□□ -1.63
SNHG1-214ENST00000540865 TGFB1P01137 390 aa4.87□□□□□ -1.63
SNHG1-214ENST00000540865 FDPSP14324 419 aaKnown RBP4.87□□□□□ -1.63
SNHG1-214ENST00000540865 ANXA13P27216 316 aa4.87□□□□□ -1.63
SNHG1-214ENST00000540865 ADSSP30520 456 aa4.87□□□□□ -1.63
SNHG1-214ENST00000540865 ABCD1P33897 745 aa4.87□□□□□ -1.63
SNHG1-214ENST00000540865 GRIK1P39086 918 aa4.87□□□□□ -1.63
SNHG1-214ENST00000540865 CTSKP43235 329 aa4.87□□□□□ -1.63
SNHG1-214ENST00000540865 CD97P48960 835 aa4.87□□□□□ -1.63
SNHG1-214ENST00000540865 ACADVLP49748 655 aa4.87□□□□□ -1.63
SNHG1-214ENST00000540865 TPMTP51580 245 aa4.87□□□□□ -1.63
SNHG1-214ENST00000540865 NOP14P78316 857 aaKnown RBP4.87□□□□□ -1.63
SNHG1-214ENST00000540865 TAF10Q12962 218 aa4.87□□□□□ -1.63
SNHG1-214ENST00000540865 TRIM29Q14134 588 aa4.87□□□□□ -1.63
SNHG1-214ENST00000540865 LY6DQ14210 128 aa4.87□□□□□ -1.63
SNHG1-214ENST00000540865 E2F5Q15329 346 aa4.87□□□□□ -1.63
SNHG1-214ENST00000540865 ZNF174Q15697 407 aa4.87□□□□□ -1.63
SNHG1-214ENST00000540865 ANO4Q32M45 955 aa4.87□□□□□ -1.63
SNHG1-214ENST00000540865 FUT11Q495W5 492 aa4.87□□□□□ -1.63
SNHG1-214ENST00000540865 ARHGAP40Q5TG30 622 aa4.87□□□□□ -1.63
SNHG1-214ENST00000540865 HES3Q5TGS1 186 aa4.87□□□□□ -1.63
SNHG1-214ENST00000540865 TDRD10Q5VZ19 366 aaKnown RBP4.87□□□□□ -1.63
SNHG1-214ENST00000540865 KRT79Q5XKE5 535 aa4.87□□□□□ -1.63
SNHG1-214ENST00000540865 USP49Q70CQ1 688 aa4.87□□□□□ -1.63
SNHG1-214ENST00000540865 TMPRSS6Q8IU80 811 aa4.87□□□□□ -1.63
SNHG1-214ENST00000540865 ZDHHC13Q8IUH4 622 aa4.87□□□□□ -1.63
SNHG1-214ENST00000540865 SLITRK4Q8IW52 837 aa4.87□□□□□ -1.63
SNHG1-214ENST00000540865 LRRC52Q8N7C0 313 aa4.87□□□□□ -1.63
SNHG1-214ENST00000540865 IGSF22Q8N9C0 903 aa4.87□□□□□ -1.63
SNHG1-214ENST00000540865 RFFLQ8WZ73 363 aa4.87□□□□□ -1.63
SNHG1-214ENST00000540865 SIPA1Q96FS4 1042 aa4.87□□□□□ -1.63
SNHG1-214ENST00000540865 HIC2Q96JB3 615 aa4.87□□□□□ -1.63
SNHG1-214ENST00000540865 C8orf48Q96LL4 319 aa4.87□□□□□ -1.63
SNHG1-214ENST00000540865 ZNF578Q96N58 590 aaPredicted RBP4.87□□□□□ -1.63
SNHG1-214ENST00000540865 DUSP23Q9BVJ7 150 aa4.87□□□□□ -1.63
SNHG1-214ENST00000540865 RAB34Q9BZG1 259 aa4.87□□□□□ -1.63
SNHG1-214ENST00000540865 MKRN2Q9H000 416 aaKnown RBP4.87□□□□□ -1.63
SNHG1-214ENST00000540865 TM9SF3Q9HD45 589 aa4.87□□□□□ -1.63
SNHG1-214ENST00000540865 PDRG1Q9NUG6 133 aa4.87□□□□□ -1.63
SNHG1-214ENST00000540865 DNAJC17Q9NVM6 304 aaKnown RBP4.87□□□□□ -1.63
SNHG1-214ENST00000540865 GDAP2Q9NXN4 497 aa4.87□□□□□ -1.63
SNHG1-214ENST00000540865 KCND2Q9NZV8 630 aa4.87□□□□□ -1.63
SNHG1-214ENST00000540865 LARSQ9P2J5 1176 aaKnown RBP4.87□□□□□ -1.63
SNHG1-214ENST00000540865 WDR35Q9P2L0 1181 aa4.87□□□□□ -1.63
SNHG1-214ENST00000540865 PPT2Q9UMR5 302 aa4.87□□□□□ -1.63
SNHG1-214ENST00000540865 SH3BP1Q9Y3L3 701 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms