RNA–Protein interactions for RNA: ENST00000540798.5

RTN3-210, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 3,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-210ENST00000540798 ASRGL1Q7L266 308 aa14.13□□□□□ -0.15
RTN3-210ENST00000540798 SCAMP5Q8TAC9 235 aa14.13□□□□□ -0.15
RTN3-210ENST00000540798 VAT1Q99536 393 aa14.13□□□□□ -0.15
RTN3-210ENST00000540798 SMOC2Q9H3U7 446 aa14.13□□□□□ -0.15
RTN3-210ENST00000540798 SEPT10Q9P0V9 454 aa14.13□□□□□ -0.15
RTN3-210ENST00000540798 SRRDQ9UH36 339 aa14.13□□□□□ -0.15
RTN3-210ENST00000540798 NOD1Q9Y239 953 aa14.13□□□□□ -0.15
RTN3-210ENST00000540798 ERI2A8K979 691 aaKnown RBP14.13□□□□□ -0.15
RTN3-210ENST00000540798 KCNK1O00180 336 aa14.13□□□□□ -0.15
RTN3-210ENST00000540798 COPEO14579 308 aa14.13□□□□□ -0.15
RTN3-210ENST00000540798 OAZ2O95190 189 aa14.13□□□□□ -0.15
RTN3-210ENST00000540798 MNAT1P51948 309 aa14.13□□□□□ -0.15
RTN3-210ENST00000540798 BRMS1LQ5PSV4 323 aa14.13□□□□□ -0.15
RTN3-210ENST00000540798 C4orf50Q6ZRC1 276 aa14.13□□□□□ -0.15
RTN3-210ENST00000540798 SLC24A5Q71RS6 500 aa14.13□□□□□ -0.15
RTN3-210ENST00000540798 PID1Q7Z2X4 250 aa14.13□□□□□ -0.15
RTN3-210ENST00000540798 HAPLN3Q96S86 360 aa14.13□□□□□ -0.15
RTN3-210ENST00000540798 TSEN34Q9BSV6 310 aaKnown RBP14.13□□□□□ -0.15
RTN3-210ENST00000540798 ZCWPW1Q9H0M4 648 aa14.13□□□□□ -0.15
RTN3-210ENST00000540798 CASS4Q9NQ75 786 aa14.13□□□□□ -0.15
RTN3-210ENST00000540798 ABCC13Q9NSE7 274 aa14.13□□□□□ -0.15
RTN3-210ENST00000540798 SYBUQ9NX95 663 aa14.13□□□□□ -0.15
RTN3-210ENST00000540798 CHKBQ9Y259 395 aa14.13□□□□□ -0.15
RTN3-210ENST00000540798 F5H423 210 aaPredicted RBP14.13□□□□□ -0.15
RTN3-210ENST00000540798 CACNG3O60359 315 aa14.13□□□□□ -0.15
RTN3-210ENST00000540798 TGDSO95455 350 aa14.13□□□□□ -0.15
RTN3-210ENST00000540798 CRHR1P34998 444 aa14.13□□□□□ -0.15
RTN3-210ENST00000540798 SERPINB4P48594 390 aa14.13□□□□□ -0.15
RTN3-210ENST00000540798 SLC5A3P53794 718 aa14.13□□□□□ -0.15
RTN3-210ENST00000540798 ZBTB17Q13105 803 aa14.13□□□□□ -0.15
RTN3-210ENST00000540798 ZNF280BQ86YH2 543 aa14.13□□□□□ -0.15
RTN3-210ENST00000540798 COLGALT2Q8IYK4 626 aa14.13□□□□□ -0.15
RTN3-210ENST00000540798 DEPDC1BQ8WUY9 529 aa14.13□□□□□ -0.15
RTN3-210ENST00000540798 TSGA13Q96PP4 275 aa14.13□□□□□ -0.15
RTN3-210ENST00000540798 ECT2Q9H8V3 914 aa14.13□□□□□ -0.15
RTN3-210ENST00000540798 C2CD2LO14523 706 aa14.12□□□□□ -0.15
RTN3-210ENST00000540798 CRADDP78560 199 aa14.12□□□□□ -0.15
RTN3-210ENST00000540798 YWHAHQ04917 246 aaPredicted RBP14.12□□□□□ -0.15
RTN3-210ENST00000540798 BMPR2Q13873 1038 aa14.12□□□□□ -0.15
RTN3-210ENST00000540798 SCD5Q86SK9 330 aa14.12□□□□□ -0.15
RTN3-210ENST00000540798 UNC5BQ8IZJ1 945 aa14.12□□□□□ -0.15
RTN3-210ENST00000540798 MLPHQ9BV36 600 aaPredicted RBP14.12□□□□□ -0.15
RTN3-210ENST00000540798 KLC4Q9NSK0 619 aa14.12□□□□□ -0.15
RTN3-210ENST00000540798 KLHL8Q9P2G9 620 aaPredicted RBP14.12□□□□□ -0.15
RTN3-210ENST00000540798 KANSL3Q9P2N6 904 aa14.12□□□□□ -0.15
RTN3-210ENST00000540798 NYNRINQ9P2P1 1898 aaKnown RBP14.12□□□□□ -0.15
RTN3-210ENST00000540798 ZBTB24O43167 697 aaPredicted RBP14.12□□□□□ -0.15
RTN3-210ENST00000540798 NOGQ13253 232 aa14.12□□□□□ -0.15
RTN3-210ENST00000540798 TEX44Q53QW1 395 aa14.12□□□□□ -0.15
RTN3-210ENST00000540798 PLEKHG4Q58EX7 1191 aa14.12□□□□□ -0.15
RTN3-210ENST00000540798 SPANXN3Q5MJ09 141 aa14.12□□□□□ -0.15
RTN3-210ENST00000540798 STXBP5Q5T5C0 1151 aa14.12□□□□□ -0.15
RTN3-210ENST00000540798 CYB5D1Q6P9G0 228 aa14.12□□□□□ -0.15
RTN3-210ENST00000540798 SPATA2LQ8IUW3 424 aaPredicted RBP14.12□□□□□ -0.15
RTN3-210ENST00000540798 NUP205Q92621 2012 aa14.12□□□□□ -0.15
RTN3-210ENST00000540798 WDR91A4D1P6 747 aa14.11□□□□□ -0.15
RTN3-210ENST00000540798 KIF1CO43896 1103 aaKnown RBP14.11□□□□□ -0.15
RTN3-210ENST00000540798 MGRN1O60291 552 aa14.11□□□□□ -0.15
RTN3-210ENST00000540798 DCTN3O75935 186 aa14.11□□□□□ -0.15
RTN3-210ENST00000540798 EPHB2P29323 1055 aa14.11□□□□□ -0.15
RTN3-210ENST00000540798 SESN2P58004 480 aaPredicted RBP14.11□□□□□ -0.15
RTN3-210ENST00000540798 NAIF1Q69YI7 327 aaPredicted RBP14.11□□□□□ -0.15
RTN3-210ENST00000540798 GLB1LQ6UWU2 654 aa14.11□□□□□ -0.15
RTN3-210ENST00000540798 ACMSDQ8TDX5 336 aa14.11□□□□□ -0.15
RTN3-210ENST00000540798 TEKT5Q96M29 485 aa14.11□□□□□ -0.15
RTN3-210ENST00000540798 TRPV6Q9H1D0 765 aa14.11□□□□□ -0.15
RTN3-210ENST00000540798 MYLK2Q9H1R3 596 aa14.11□□□□□ -0.15
RTN3-210ENST00000540798 SIRPGQ9P1W8 387 aa14.11□□□□□ -0.15
RTN3-210ENST00000540798 PGFP49763 221 aa14.11□□□□□ -0.15
RTN3-210ENST00000540798 NRG1Q02297 640 aaPredicted RBP14.11□□□□□ -0.15
RTN3-210ENST00000540798 PPP2R5DQ14738 602 aa14.11□□□□□ -0.15
RTN3-210ENST00000540798 NOMO2Q5JPE7 1267 aa14.11□□□□□ -0.15
RTN3-210ENST00000540798 PACS1Q6VY07 963 aa14.11□□□□□ -0.15
RTN3-210ENST00000540798 TMEM135Q86UB9 458 aa14.11□□□□□ -0.15
RTN3-210ENST00000540798 ARHGEF3Q9NR81 526 aa14.11□□□□□ -0.15
RTN3-210ENST00000540798 ELF3P78545 371 aaPredicted RBP14.1□□□□□ -0.15
RTN3-210ENST00000540798 FYB2Q5VWT5 728 aa14.1□□□□□ -0.15
RTN3-210ENST00000540798 LHX8Q68G74 356 aa14.1□□□□□ -0.15
RTN3-210ENST00000540798 ITPRIPL1Q6GPH6 555 aa14.1□□□□□ -0.15
RTN3-210ENST00000540798 ARHGAP12Q8IWW6 846 aa14.1□□□□□ -0.15
RTN3-210ENST00000540798 REM2Q8IYK8 340 aaPredicted RBP14.1□□□□□ -0.15
RTN3-210ENST00000540798 OR52K1Q8NGK4 314 aa14.1□□□□□ -0.15
RTN3-210ENST00000540798 RAB3IL1Q8TBN0 382 aa14.1□□□□□ -0.15
RTN3-210ENST00000540798 PXYLP1Q8TE99 480 aa14.1□□□□□ -0.15
RTN3-210ENST00000540798 TSSK1BQ9BXA7 367 aa14.1□□□□□ -0.15
RTN3-210ENST00000540798 KCNU1A8MYU2 1149 aa14.1□□□□□ -0.15
RTN3-210ENST00000540798 AOC2O75106 756 aa14.1□□□□□ -0.15
RTN3-210ENST00000540798 UNC5CO95185 931 aa14.1□□□□□ -0.15
RTN3-210ENST00000540798 POLBP06746 335 aa14.1□□□□□ -0.15
RTN3-210ENST00000540798 MROH9Q5TGP6 573 aa14.1□□□□□ -0.15
RTN3-210ENST00000540798 AFMIDQ63HM1 303 aa14.1□□□□□ -0.15
RTN3-210ENST00000540798 SUGP1Q8IWZ8 645 aaKnown RBP14.1□□□□□ -0.15
RTN3-210ENST00000540798 CDKL2Q92772 493 aa14.1□□□□□ -0.15
RTN3-210ENST00000540798 CASP10Q92851 521 aa14.1□□□□□ -0.15
RTN3-210ENST00000540798 ISL2Q96A47 359 aa14.1□□□□□ -0.15
RTN3-210ENST00000540798 FUBP3Q96I24 572 aaKnown RBP eCLIP14.1□□□□□ -0.15
RTN3-210ENST00000540798 GLT1D1Q96MS3 346 aa14.1□□□□□ -0.15
RTN3-210ENST00000540798 FCRL3Q96P31 734 aaPredicted RBP14.1□□□□□ -0.15
RTN3-210ENST00000540798 COL6A1P12109 1028 aa14.1□□□□□ -0.15
RTN3-210ENST00000540798 BGNP21810 368 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms