RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 M0QYT0 321 aa10.72□□□□□ -0.69
CDCA3-208ENST00000540683 GABBR2O75899 941 aa10.72□□□□□ -0.69
CDCA3-208ENST00000540683 SEMA4FO95754 770 aa10.72□□□□□ -0.69
CDCA3-208ENST00000540683 ZNF883P0CG24 379 aa10.72□□□□□ -0.69
CDCA3-208ENST00000540683 SLC6A4P31645 630 aa10.72□□□□□ -0.69
CDCA3-208ENST00000540683 CLCN1P35523 988 aa10.72□□□□□ -0.69
CDCA3-208ENST00000540683 ETFBP38117 255 aa10.72□□□□□ -0.69
CDCA3-208ENST00000540683 MLLT3P42568 568 aaPredicted RBP10.72□□□□□ -0.69
CDCA3-208ENST00000540683 MAPK8P45983 427 aa10.72□□□□□ -0.69
CDCA3-208ENST00000540683 PLK1P53350 603 aa10.72□□□□□ -0.69
CDCA3-208ENST00000540683 COPAP53621 1224 aa10.72□□□□□ -0.69
CDCA3-208ENST00000540683 CDH4P55283 916 aa10.72□□□□□ -0.69
CDCA3-208ENST00000540683 MIIPQ5JXC2 388 aa10.72□□□□□ -0.69
CDCA3-208ENST00000540683 SYPL2Q5VXT5 272 aa10.72□□□□□ -0.69
CDCA3-208ENST00000540683 RAP1GAP2Q684P5 730 aa10.72□□□□□ -0.69
CDCA3-208ENST00000540683 TCEAL6Q6IPX3 200 aa10.72□□□□□ -0.69
CDCA3-208ENST00000540683 PSAPL1Q6NUJ1 521 aa10.72□□□□□ -0.69
CDCA3-208ENST00000540683 GJB7Q6PEY0 223 aa10.72□□□□□ -0.69
CDCA3-208ENST00000540683 RBM43Q6ZSC3 357 aaKnown RBP10.72□□□□□ -0.69
CDCA3-208ENST00000540683 SETD3Q86TU7 594 aaPredicted RBP10.72□□□□□ -0.69
CDCA3-208ENST00000540683 SLC47A2Q86VL8 602 aa10.72□□□□□ -0.69
CDCA3-208ENST00000540683 PASD1Q8IV76 773 aa10.72□□□□□ -0.69
CDCA3-208ENST00000540683 ADAM32Q8TC27 787 aa10.72□□□□□ -0.69
CDCA3-208ENST00000540683 CYB5D2Q8WUJ1 264 aa10.72□□□□□ -0.69
CDCA3-208ENST00000540683 TCEAL3Q969E4 200 aa10.72□□□□□ -0.69
CDCA3-208ENST00000540683 C1orf74Q96LT6 269 aa10.72□□□□□ -0.69
CDCA3-208ENST00000540683 PCMTD1Q96MG8 357 aaPredicted RBP10.72□□□□□ -0.69
CDCA3-208ENST00000540683 OMDQ99983 421 aa10.72□□□□□ -0.69
CDCA3-208ENST00000540683 C2orf49Q9BVC5 232 aaPredicted RBP10.72□□□□□ -0.69
CDCA3-208ENST00000540683 RSPH9Q9H1X1 276 aaPredicted RBP10.72□□□□□ -0.69
CDCA3-208ENST00000540683 KDM4CQ9H3R0 1056 aa10.72□□□□□ -0.69
CDCA3-208ENST00000540683 SMOC1Q9H4F8 434 aa10.72□□□□□ -0.69
CDCA3-208ENST00000540683 SIX2Q9NPC8 291 aa10.72□□□□□ -0.69
CDCA3-208ENST00000540683 PRSS16Q9NQE7 514 aa10.72□□□□□ -0.69
CDCA3-208ENST00000540683 DNAAF2Q9NVR5 837 aaKnown RBP10.72□□□□□ -0.69
CDCA3-208ENST00000540683 DONSONQ9NYP3 566 aa10.72□□□□□ -0.69
CDCA3-208ENST00000540683 ERVW-1Q9UQF0 538 aa10.72□□□□□ -0.69
CDCA3-208ENST00000540683 ITIH6Q6UXX5 1313 aa10.72□□□□□ -0.69
CDCA3-208ENST00000540683 NCOR2Q9Y618 2525 aa10.72□□□□□ -0.69
CDCA3-208ENST00000540683 CXorf51AA0A1B0GTR3 108 aa10.71□□□□□ -0.69
CDCA3-208ENST00000540683 GOLGA6L7A0A1B0GV03 622 aa10.71□□□□□ -0.69
CDCA3-208ENST00000540683 C1QTNF3-AMACRE9PGA6 284 aa10.71□□□□□ -0.69
CDCA3-208ENST00000540683 F8VZ95 297 aa10.71□□□□□ -0.69
CDCA3-208ENST00000540683 CDX4O14627 284 aaPredicted RBP10.71□□□□□ -0.69
CDCA3-208ENST00000540683 ALOX15BO15296 676 aa10.71□□□□□ -0.69
CDCA3-208ENST00000540683 MAGEC1O60732 1142 aa10.71□□□□□ -0.69
CDCA3-208ENST00000540683 PTMSP20962 102 aa10.71□□□□□ -0.69
CDCA3-208ENST00000540683 C5AR1P21730 350 aa10.71□□□□□ -0.69
CDCA3-208ENST00000540683 CD70P32970 193 aa10.71□□□□□ -0.69
CDCA3-208ENST00000540683 STAT1P42224 750 aa10.71□□□□□ -0.69
CDCA3-208ENST00000540683 GEMIN4P57678 1058 aaKnown RBP10.71□□□□□ -0.69
CDCA3-208ENST00000540683 RPS24P62847 133 aaKnown RBP10.71□□□□□ -0.69
CDCA3-208ENST00000540683 NME3Q13232 169 aa10.71□□□□□ -0.69
CDCA3-208ENST00000540683 EIF4EBP2Q13542 120 aaPredicted RBP10.71□□□□□ -0.69
CDCA3-208ENST00000540683 PTPRNQ16849 979 aa10.71□□□□□ -0.69
CDCA3-208ENST00000540683 ZNF423Q2M1K9 1284 aa10.71□□□□□ -0.69
CDCA3-208ENST00000540683 SLC25A52Q3SY17 297 aa10.71□□□□□ -0.69
CDCA3-208ENST00000540683 C6orf118Q5T5N4 469 aa10.71□□□□□ -0.69
CDCA3-208ENST00000540683 CCDC183Q5T5S1 534 aa10.71□□□□□ -0.69
CDCA3-208ENST00000540683 FAM102AQ5T9C2 384 aaPredicted RBP10.71□□□□□ -0.69
CDCA3-208ENST00000540683 SH3PXD2AQ5TCZ1 1133 aa10.71□□□□□ -0.69
CDCA3-208ENST00000540683 DCAF12L1Q5VU92 463 aa10.71□□□□□ -0.69
CDCA3-208ENST00000540683 TMEM215Q68D42 235 aa10.71□□□□□ -0.69
CDCA3-208ENST00000540683 NADSYN1Q6IA69 706 aa10.71□□□□□ -0.69
CDCA3-208ENST00000540683 ZNF783Q6ZMS7 281 aa10.71□□□□□ -0.69
CDCA3-208ENST00000540683 FAM183BPQ6ZVS7 135 aa10.71□□□□□ -0.69
CDCA3-208ENST00000540683 ADAT2Q7Z6V5 191 aaKnown RBP10.71□□□□□ -0.69
CDCA3-208ENST00000540683 SLC41A1Q8IVJ1 513 aa10.71□□□□□ -0.69
CDCA3-208ENST00000540683 CCAR2Q8N163 923 aaKnown RBP10.71□□□□□ -0.69
CDCA3-208ENST00000540683 MINDY1Q8N5J2 469 aa10.71□□□□□ -0.69
CDCA3-208ENST00000540683 NEK11Q8NG66 645 aa10.71□□□□□ -0.69
CDCA3-208ENST00000540683 SORCS1Q8WY21 1168 aa10.71□□□□□ -0.69
CDCA3-208ENST00000540683 PRICKLE1Q96MT3 831 aaPredicted RBP10.71□□□□□ -0.69
CDCA3-208ENST00000540683 MIR1-1HGQ9H1L0 117 aa10.71□□□□□ -0.69
CDCA3-208ENST00000540683 TMEM74BQ9NUR3 256 aa10.71□□□□□ -0.69
CDCA3-208ENST00000540683 CYTH4Q9UIA0 394 aa10.71□□□□□ -0.69
CDCA3-208ENST00000540683 CLEC4EQ9ULY5 219 aa10.71□□□□□ -0.69
CDCA3-208ENST00000540683 ATXN2Q99700 1313 aaKnown RBP10.7□□□□□ -0.7
CDCA3-208ENST00000540683 SYNJ2BP-COX16A0A087WUM0 186 aa10.7□□□□□ -0.7
CDCA3-208ENST00000540683 SMTNL1A8MU46 457 aa10.7□□□□□ -0.7
CDCA3-208ENST00000540683 PATE3B3GLJ2 98 aa10.7□□□□□ -0.7
CDCA3-208ENST00000540683 YKT6O15498 198 aa10.7□□□□□ -0.7
CDCA3-208ENST00000540683 SLC7A4O43246 635 aa10.7□□□□□ -0.7
CDCA3-208ENST00000540683 CD27P26842 260 aa10.7□□□□□ -0.7
CDCA3-208ENST00000540683 SOX5P35711 763 aa10.7□□□□□ -0.7
CDCA3-208ENST00000540683 NSFP46459 744 aaKnown RBP10.7□□□□□ -0.7
CDCA3-208ENST00000540683 GRIA4P48058 902 aa10.7□□□□□ -0.7
CDCA3-208ENST00000540683 CXCR3P49682 368 aa10.7□□□□□ -0.7
CDCA3-208ENST00000540683 SULT1E1P49888 294 aa10.7□□□□□ -0.7
CDCA3-208ENST00000540683 CLCN6P51797 869 aa10.7□□□□□ -0.7
CDCA3-208ENST00000540683 RPS14P62263 151 aaKnown RBP10.7□□□□□ -0.7
CDCA3-208ENST00000540683 CDR2Q01850 454 aa10.7□□□□□ -0.7
CDCA3-208ENST00000540683 DEUP1Q05D60 604 aa10.7□□□□□ -0.7
CDCA3-208ENST00000540683 SLC20A2Q08357 652 aa10.7□□□□□ -0.7
CDCA3-208ENST00000540683 ZNF252P-AS1Q0IIN9 211 aa10.7□□□□□ -0.7
CDCA3-208ENST00000540683 SEMA3BQ13214 749 aa10.7□□□□□ -0.7
CDCA3-208ENST00000540683 AUHQ13825 339 aaKnown RBP10.7□□□□□ -0.7
CDCA3-208ENST00000540683 FILIP1LQ4L180 1135 aa10.7□□□□□ -0.7
CDCA3-208ENST00000540683 CDKAL1Q5VV42 579 aa10.7□□□□□ -0.7
CDCA3-208ENST00000540683 RETSATQ6NUM9 610 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms