RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 MFSD11O43934 449 aa12.59□□□□□ -0.39
NPC1-202ENST00000540608 LCP1P13796 627 aa12.59□□□□□ -0.39
NPC1-202ENST00000540608 GRM5P41594 1212 aa12.59□□□□□ -0.39
NPC1-202ENST00000540608 BST2Q10589 180 aaKnown RBP12.59□□□□□ -0.39
NPC1-202ENST00000540608 KLF10Q13118 480 aa12.59□□□□□ -0.39
NPC1-202ENST00000540608 SDCCAG8Q86SQ7 713 aaPredicted RBP12.59□□□□□ -0.39
NPC1-202ENST00000540608 PSTKQ8IV42 348 aaKnown RBP12.59□□□□□ -0.39
NPC1-202ENST00000540608 DCLK2Q8N568 766 aa12.59□□□□□ -0.39
NPC1-202ENST00000540608 C7orf31Q8N865 590 aa12.59□□□□□ -0.39
NPC1-202ENST00000540608 OR6B3Q8NGW1 331 aa12.59□□□□□ -0.39
NPC1-202ENST00000540608 PIP4K2CQ8TBX8 421 aa12.59□□□□□ -0.39
NPC1-202ENST00000540608 PGBD4Q96DM1 585 aa12.59□□□□□ -0.39
NPC1-202ENST00000540608 LPIN3Q9BQK8 851 aa12.59□□□□□ -0.39
NPC1-202ENST00000540608 RPS6KL1Q9Y6S9 549 aa12.59□□□□□ -0.39
NPC1-202ENST00000540608 ZSWIM8A7E2V4 1837 aa12.59□□□□□ -0.39
NPC1-202ENST00000540608 TMEM114B3SHH9 223 aa12.58□□□□□ -0.39
NPC1-202ENST00000540608 ZBTB14O43829 449 aa12.58□□□□□ -0.39
NPC1-202ENST00000540608 DDNO94850 711 aaPredicted RBP12.58□□□□□ -0.39
NPC1-202ENST00000540608 PABPC4LP0CB38 370 aaKnown RBP12.58□□□□□ -0.39
NPC1-202ENST00000540608 PSMB4P28070 264 aa12.58□□□□□ -0.39
NPC1-202ENST00000540608 SERPINB8P50452 374 aa12.58□□□□□ -0.39
NPC1-202ENST00000540608 DLG1Q12959 904 aa12.58□□□□□ -0.39
NPC1-202ENST00000540608 USP4Q13107 963 aa12.58□□□□□ -0.39
NPC1-202ENST00000540608 TRIP10Q15642 601 aa12.58□□□□□ -0.39
NPC1-202ENST00000540608 MMEL1Q495T6 779 aa12.58□□□□□ -0.39
NPC1-202ENST00000540608 TCHHL1Q5QJ38 904 aaPredicted RBP12.58□□□□□ -0.39
NPC1-202ENST00000540608 CES3Q6UWW8 571 aa12.58□□□□□ -0.39
NPC1-202ENST00000540608 ZNF781Q8N8C0 355 aa12.58□□□□□ -0.39
NPC1-202ENST00000540608 HIPK4Q8NE63 616 aa12.58□□□□□ -0.39
NPC1-202ENST00000540608 FCRL3Q96P31 734 aaPredicted RBP12.58□□□□□ -0.39
NPC1-202ENST00000540608 BTBD9Q96Q07 612 aa12.58□□□□□ -0.39
NPC1-202ENST00000540608 RBBP8Q99708 897 aa12.58□□□□□ -0.39
NPC1-202ENST00000540608 DPEP3Q9H4B8 488 aa12.58□□□□□ -0.39
NPC1-202ENST00000540608 SSX2IPQ9Y2D8 614 aa12.58□□□□□ -0.39
NPC1-202ENST00000540608 DERAQ9Y315 318 aa12.58□□□□□ -0.39
NPC1-202ENST00000540608 PPEF2O14830 753 aa12.58□□□□□ -0.4
NPC1-202ENST00000540608 HSPA4LO95757 839 aa12.58□□□□□ -0.4
NPC1-202ENST00000540608 SPRP35270 261 aaPredicted RBP12.58□□□□□ -0.4
NPC1-202ENST00000540608 GMPRP36959 345 aa12.58□□□□□ -0.4
NPC1-202ENST00000540608 ACADSBP45954 432 aa12.58□□□□□ -0.4
NPC1-202ENST00000540608 BCAT1P54687 386 aa12.58□□□□□ -0.4
NPC1-202ENST00000540608 BIRC2Q13490 618 aa12.58□□□□□ -0.4
NPC1-202ENST00000540608 PEX6Q13608 980 aa12.58□□□□□ -0.4
NPC1-202ENST00000540608 TTLL4Q14679 1199 aa12.58□□□□□ -0.4
NPC1-202ENST00000540608 PDK1Q15118 436 aa12.58□□□□□ -0.4
NPC1-202ENST00000540608 CMC1Q7Z7K0 106 aa12.58□□□□□ -0.4
NPC1-202ENST00000540608 TNS4Q8IZW8 715 aa12.58□□□□□ -0.4
NPC1-202ENST00000540608 ZNF567Q8N184 647 aa12.58□□□□□ -0.4
NPC1-202ENST00000540608 PLD6Q8N2A8 252 aaKnown RBP12.58□□□□□ -0.4
NPC1-202ENST00000540608 CXCL16Q9H2A7 254 aa12.58□□□□□ -0.4
NPC1-202ENST00000540608 PLEKHA5Q9HAU0 1116 aa12.58□□□□□ -0.4
NPC1-202ENST00000540608 VCX3AQ9NNX9 186 aa12.58□□□□□ -0.4
NPC1-202ENST00000540608 IGSF9Q9P2J2 1179 aa12.58□□□□□ -0.4
NPC1-202ENST00000540608 G3V2L1 256 aa12.58□□□□□ -0.4
NPC1-202ENST00000540608 ZMPSTE24O75844 475 aa12.58□□□□□ -0.4
NPC1-202ENST00000540608 LGALS2P05162 132 aa12.58□□□□□ -0.4
NPC1-202ENST00000540608 MPOP05164 745 aa12.58□□□□□ -0.4
NPC1-202ENST00000540608 GLDCP23378 1020 aa12.58□□□□□ -0.4
NPC1-202ENST00000540608 MATKP42679 507 aa12.58□□□□□ -0.4
NPC1-202ENST00000540608 NUMBP49757 651 aa12.58□□□□□ -0.4
NPC1-202ENST00000540608 ARHGAP1Q07960 439 aa12.58□□□□□ -0.4
NPC1-202ENST00000540608 IFRD2Q12894 506 aaPredicted RBP12.58□□□□□ -0.4
NPC1-202ENST00000540608 PDK3Q15120 406 aa12.58□□□□□ -0.4
NPC1-202ENST00000540608 ANKRD20A4Q4UJ75 823 aa12.58□□□□□ -0.4
NPC1-202ENST00000540608 SLC9B1Q4ZJI4 515 aa12.58□□□□□ -0.4
NPC1-202ENST00000540608 OGFRL1Q5TC84 451 aaPredicted RBP12.58□□□□□ -0.4
NPC1-202ENST00000540608 NAPRTQ6XQN6 538 aa12.58□□□□□ -0.4
NPC1-202ENST00000540608 FAM131BQ86XD5 332 aa12.58□□□□□ -0.4
NPC1-202ENST00000540608 ERO1BQ86YB8 467 aa12.58□□□□□ -0.4
NPC1-202ENST00000540608 SULF1Q8IWU6 871 aa12.58□□□□□ -0.4
NPC1-202ENST00000540608 EFCAB3Q8N7B9 438 aa12.58□□□□□ -0.4
NPC1-202ENST00000540608 ICA1LQ8NDH6 482 aa12.58□□□□□ -0.4
NPC1-202ENST00000540608 NLRP7Q8WX94 980 aa12.58□□□□□ -0.4
NPC1-202ENST00000540608 ZMAT2Q96NC0 199 aaKnown RBP12.58□□□□□ -0.4
NPC1-202ENST00000540608 GORASP1Q9BQQ3 440 aa12.58□□□□□ -0.4
NPC1-202ENST00000540608 OXCT2Q9BYC2 517 aaPredicted RBP12.58□□□□□ -0.4
NPC1-202ENST00000540608 CEP41Q9BYV8 373 aa12.58□□□□□ -0.4
NPC1-202ENST00000540608 MAN1C1Q9NR34 630 aa12.58□□□□□ -0.4
NPC1-202ENST00000540608 SEPT10Q9P0V9 454 aa12.58□□□□□ -0.4
NPC1-202ENST00000540608 COMMD3-BMI1R4GMX3 469 aa12.58□□□□□ -0.4
NPC1-202ENST00000540608 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.57□□□□□ -0.4
NPC1-202ENST00000540608 E2F8A0AVK6 867 aa12.57□□□□□ -0.4
NPC1-202ENST00000540608 KLHL33A6NCF5 533 aa12.57□□□□□ -0.4
NPC1-202ENST00000540608 AP1G1O43747 822 aa12.57□□□□□ -0.4
NPC1-202ENST00000540608 ADORA2BP29275 332 aa12.57□□□□□ -0.4
NPC1-202ENST00000540608 IREB2P48200 963 aaKnown RBP12.57□□□□□ -0.4
NPC1-202ENST00000540608 LIMK2P53671 638 aa12.57□□□□□ -0.4
NPC1-202ENST00000540608 SMAD1Q15797 465 aaKnown RBP12.57□□□□□ -0.4
NPC1-202ENST00000540608 ZBTB6Q15916 424 aa12.57□□□□□ -0.4
NPC1-202ENST00000540608 SLC25A52Q3SY17 297 aa12.57□□□□□ -0.4
NPC1-202ENST00000540608 FSTL4Q6MZW2 842 aa12.57□□□□□ -0.4
NPC1-202ENST00000540608 STRA8Q7Z7C7 330 aa12.57□□□□□ -0.4
NPC1-202ENST00000540608 CRYBG2Q8N1P7 616 aa12.57□□□□□ -0.4
NPC1-202ENST00000540608 NME8Q8N427 588 aa12.57□□□□□ -0.4
NPC1-202ENST00000540608 LRRC52Q8N7C0 313 aa12.57□□□□□ -0.4
NPC1-202ENST00000540608 CCNYQ8ND76 341 aa12.57□□□□□ -0.4
NPC1-202ENST00000540608 SREK1Q8WXA9 508 aaKnown RBP12.57□□□□□ -0.4
NPC1-202ENST00000540608 DCPSQ96C86 337 aaKnown RBP12.57□□□□□ -0.4
NPC1-202ENST00000540608 HSFY1Q96LI6 401 aa12.57□□□□□ -0.4
NPC1-202ENST00000540608 HAPLN3Q96S86 360 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms