RNA–Protein interactions for RNA: ENST00000540447.5

YBX3-208, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 6,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-208ENST00000540447 SLFN13Q68D06 897 aa8.92□□□□□ -0.98
YBX3-208ENST00000540447 SPESP1Q6UW49 350 aa8.92□□□□□ -0.98
YBX3-208ENST00000540447 ARHGAP36Q6ZRI8 547 aa8.92□□□□□ -0.98
YBX3-208ENST00000540447 PIGWQ7Z7B1 504 aa8.92□□□□□ -0.98
YBX3-208ENST00000540447 IFNLR1Q8IU57 520 aaPredicted RBP8.92□□□□□ -0.98
YBX3-208ENST00000540447 ALLCQ8N6M5 410 aa8.92□□□□□ -0.98
YBX3-208ENST00000540447 HM13Q8TCT9 377 aa8.92□□□□□ -0.98
YBX3-208ENST00000540447 MRPL48Q96GC5 212 aaKnown RBP8.92□□□□□ -0.98
YBX3-208ENST00000540447 DIRAS2Q96HU8 199 aa8.92□□□□□ -0.98
YBX3-208ENST00000540447 HIPK3Q9H422 1215 aa8.92□□□□□ -0.98
YBX3-208ENST00000540447 BLOC1S4Q9NUP1 217 aa8.92□□□□□ -0.98
YBX3-208ENST00000540447 UBQLN1Q9UMX0 589 aaKnown RBP8.92□□□□□ -0.98
YBX3-208ENST00000540447 SOAT2O75908 522 aa8.92□□□□□ -0.98
YBX3-208ENST00000540447 GSTM1P09488 218 aa8.92□□□□□ -0.98
YBX3-208ENST00000540447 GUCY1A2P33402 732 aa8.92□□□□□ -0.98
YBX3-208ENST00000540447 IDH2P48735 452 aaKnown RBP8.92□□□□□ -0.98
YBX3-208ENST00000540447 ACSBG2Q5FVE4 666 aa8.92□□□□□ -0.98
YBX3-208ENST00000540447 IL31Q6EBC2 164 aa8.92□□□□□ -0.98
YBX3-208ENST00000540447 USP17L2Q6R6M4 530 aa8.92□□□□□ -0.98
YBX3-208ENST00000540447 POTEGQ6S5H5 508 aa8.92□□□□□ -0.98
YBX3-208ENST00000540447 KLHL24Q6TFL4 600 aa8.92□□□□□ -0.98
YBX3-208ENST00000540447 KDELC2Q7Z4H8 507 aa8.92□□□□□ -0.98
YBX3-208ENST00000540447 HERC2P3Q9BVR0 1158 aa8.92□□□□□ -0.98
YBX3-208ENST00000540447 PUS3Q9BZE2 481 aaKnown RBP8.92□□□□□ -0.98
YBX3-208ENST00000540447 CRISPLD1Q9H336 500 aa8.92□□□□□ -0.98
YBX3-208ENST00000540447 IKZF3Q9UKT9 509 aa8.92□□□□□ -0.98
YBX3-208ENST00000540447 A0A0X1KG70 313 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 TSPAN1O60635 241 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 MPOP05164 745 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 BMP3P12645 472 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 IL1R1P14778 569 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 ZNF3P17036 446 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 TIE1P35590 1138 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 RXRGP48443 463 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 MARSP56192 900 aaKnown RBP8.91□□□□□ -0.98
YBX3-208ENST00000540447 SMTNL2Q2TAL5 461 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 XKRXQ6PP77 449 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 ZNF517Q6ZMY9 492 aaPredicted RBP8.91□□□□□ -0.98
YBX3-208ENST00000540447 HAUS6Q7Z4H7 955 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 FEZF2Q8TBJ5 459 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 C12orf43Q96C57 262 aaKnown RBP8.91□□□□□ -0.98
YBX3-208ENST00000540447 RPF1Q9H9Y2 349 aaKnown RBP8.91□□□□□ -0.98
YBX3-208ENST00000540447 ERGIC3Q9Y282 383 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 UHRF1BP1LA0JNW5 1464 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 TIPRLO75663 272 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 CRTAMO95727 393 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 ECDO95905 644 aaPredicted RBP8.91□□□□□ -0.98
YBX3-208ENST00000540447 IDO1P14902 403 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 AMPD1P23109 780 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 PTK6Q13882 451 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 KCNA10Q16322 511 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 DEF8Q6ZN54 512 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 THAP5Q7Z6K1 395 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 GALNT7Q86SF2 657 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 IFNL1Q8IU54 200 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 MBOAT7Q96N66 472 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 RTKNQ9BST9 563 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 SLC22A4Q9H015 551 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 KCTD10Q9H3F6 313 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 ABCB9Q9NP78 766 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 BRD7Q9NPI1 651 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 SNTG2Q9NY99 539 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 NKIRAS2Q9NYR9 191 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 MED11Q9P086 117 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 STAP1Q9ULZ2 295 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 PLA2G4CQ9UP65 541 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 HPSEQ9Y251 543 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 BCS1LQ9Y276 419 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 ABCB11O95342 1321 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 SSX5O60225 188 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 IFNA14P01570 189 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 GNAO1P09471 354 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 PHKG1Q16816 387 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 SLC25A24Q6NUK1 477 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 TMPRSS11AQ6ZMR5 421 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 CIR1Q86X95 450 aaPredicted RBP8.91□□□□□ -0.98
YBX3-208ENST00000540447 HERC6Q8IVU3 1022 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 THEMISQ8N1K5 641 aaPredicted RBP8.91□□□□□ -0.98
YBX3-208ENST00000540447 SLC4A11Q8NBS3 891 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 FBXO30Q8TB52 745 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 FAM105AQ9NUU6 356 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 MORF4L1Q9UBU8 362 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 GTF2A1LQ9UNN4 478 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 PKP3Q9Y446 797 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 HSPB11Q9Y547 144 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 MYOM2P54296 1465 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 TOP2BQ02880 1626 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 A0A1B0GVG6 124 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 C5orf60A6NFR6 353 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 SDR42E2A6NKP2 422 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 GSTM5P46439 218 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 PTPN5P54829 565 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 RPL26P61254 145 aaKnown RBP8.91□□□□□ -0.98
YBX3-208ENST00000540447 BNIP2Q12982 314 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 BTBD16Q32M84 506 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 FAM91A1Q658Y4 838 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 ACAD10Q6JQN1 1059 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 ERAP2Q6P179 960 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 SULF1Q8IWU6 871 aa8.91□□□□□ -0.98
YBX3-208ENST00000540447 OR8K3Q8NH51 312 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms