RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 KIAA1324Q6UXG2 1013 aaKnown RBP15.54■□□□□ 0.08
UBE3B-212ENST00000540230 MCOLN2Q8IZK6 566 aa15.54■□□□□ 0.08
UBE3B-212ENST00000540230 C3orf20Q8ND61 904 aa15.54■□□□□ 0.08
UBE3B-212ENST00000540230 MRGPRX3Q96LB0 322 aa15.54■□□□□ 0.08
UBE3B-212ENST00000540230 SELENOOQ9BVL4 669 aa15.54■□□□□ 0.08
UBE3B-212ENST00000540230 MAGEB5Q9BZ81 275 aa15.54■□□□□ 0.08
UBE3B-212ENST00000540230 USP18Q9UMW8 372 aa15.54■□□□□ 0.08
UBE3B-212ENST00000540230 CYP8B1Q9UNU6 501 aa15.54■□□□□ 0.08
UBE3B-212ENST00000540230 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.54■□□□□ 0.08
UBE3B-212ENST00000540230 DOCK4Q8N1I0 1966 aa15.54■□□□□ 0.08
UBE3B-212ENST00000540230 CEP192Q8TEP8 1941 aa15.54■□□□□ 0.08
UBE3B-212ENST00000540230 IGHV1OR15-9A0A0B4J2B8 117 aa15.53■□□□□ 0.08
UBE3B-212ENST00000540230 DDX3XO00571 662 aaKnown RBP eCLIP15.53■□□□□ 0.081e-7■■■□□ 18.1
UBE3B-212ENST00000540230 CCDC172P0C7W6 258 aa15.53■□□□□ 0.08
UBE3B-212ENST00000540230 KRT3P12035 628 aa15.53■□□□□ 0.08
UBE3B-212ENST00000540230 RRM1P23921 792 aa15.53■□□□□ 0.08
UBE3B-212ENST00000540230 SDC4P31431 198 aa15.53■□□□□ 0.08
UBE3B-212ENST00000540230 RPL7AP62424 266 aaKnown RBP15.53■□□□□ 0.08
UBE3B-212ENST00000540230 C1QBPQ07021 282 aaKnown RBP15.53■□□□□ 0.08
UBE3B-212ENST00000540230 ELF2Q15723 593 aa15.53■□□□□ 0.08
UBE3B-212ENST00000540230 C5orf22Q49AR2 442 aa15.53■□□□□ 0.08
UBE3B-212ENST00000540230 PPP1R15BQ5SWA1 713 aa15.53■□□□□ 0.08
UBE3B-212ENST00000540230 TTC39BQ5VTQ0 682 aaPredicted RBP15.53■□□□□ 0.08
UBE3B-212ENST00000540230 LRSAM1Q6UWE0 723 aa15.53■□□□□ 0.08
UBE3B-212ENST00000540230 SND1Q7KZF4 910 aaKnown RBP eCLIP15.53■□□□□ 0.08
UBE3B-212ENST00000540230 ZNF557Q8N988 423 aaPredicted RBP15.53■□□□□ 0.08
UBE3B-212ENST00000540230 SPACA7Q96KW9 195 aa15.53■□□□□ 0.08
UBE3B-212ENST00000540230 XPO4Q9C0E2 1151 aaKnown RBP15.53■□□□□ 0.08
UBE3B-212ENST00000540230 TSPY26PQ9H489 355 aa15.53■□□□□ 0.08
UBE3B-212ENST00000540230 SEMA4GQ9NTN9 838 aa15.53■□□□□ 0.08
UBE3B-212ENST00000540230 KIAA1522Q9P206 1035 aaPredicted RBP15.53■□□□□ 0.08
UBE3B-212ENST00000540230 PLA2G4CQ9UP65 541 aa15.53■□□□□ 0.08
UBE3B-212ENST00000540230 NYNRINQ9P2P1 1898 aaKnown RBP15.53■□□□□ 0.08
UBE3B-212ENST00000540230 CEP250Q9BV73 2442 aa15.53■□□□□ 0.08
UBE3B-212ENST00000540230 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.53■□□□□ 0.08
UBE3B-212ENST00000540230 ATMINO43313 823 aaPredicted RBP15.53■□□□□ 0.08
UBE3B-212ENST00000540230 SYNCRIPO60506 623 aaKnown RBP15.53■□□□□ 0.08
UBE3B-212ENST00000540230 ATP5BP06576 529 aaKnown RBP15.53■□□□□ 0.08
UBE3B-212ENST00000540230 PTPN9P43378 593 aa15.53■□□□□ 0.08
UBE3B-212ENST00000540230 STK19P49842 368 aaPredicted RBP15.53■□□□□ 0.08
UBE3B-212ENST00000540230 HDAC4P56524 1084 aa15.53■□□□□ 0.08
UBE3B-212ENST00000540230 CAMK2GQ13555 558 aaPredicted RBP15.53■□□□□ 0.08
UBE3B-212ENST00000540230 HGSNATQ68CP4 663 aa15.53■□□□□ 0.08
UBE3B-212ENST00000540230 DNAJC24Q6P3W2 148 aa15.53■□□□□ 0.08
UBE3B-212ENST00000540230 ARMCX6Q7L4S7 300 aa15.53■□□□□ 0.08
UBE3B-212ENST00000540230 TMPRSS6Q8IU80 811 aa15.53■□□□□ 0.08
UBE3B-212ENST00000540230 CCDC117Q8IWD4 279 aaPredicted RBP15.53■□□□□ 0.08
UBE3B-212ENST00000540230 TMEFF1Q8IYR6 380 aa15.53■□□□□ 0.08
UBE3B-212ENST00000540230 DEFB119Q8N690 84 aa15.53■□□□□ 0.08
UBE3B-212ENST00000540230 RNF214Q8ND24 703 aa15.53■□□□□ 0.08
UBE3B-212ENST00000540230 CPLX3Q8WVH0 158 aa15.53■□□□□ 0.08
UBE3B-212ENST00000540230 ALG14Q96F25 216 aa15.53■□□□□ 0.08
UBE3B-212ENST00000540230 LOXL4Q96JB6 756 aa15.53■□□□□ 0.08
UBE3B-212ENST00000540230 MCEEQ96PE7 176 aa15.53■□□□□ 0.08
UBE3B-212ENST00000540230 EDEM3Q9BZQ6 932 aa15.53■□□□□ 0.08
UBE3B-212ENST00000540230 PRDM16Q9HAZ2 1276 aa15.53■□□□□ 0.08
UBE3B-212ENST00000540230 MPP6Q9NZW5 540 aa15.53■□□□□ 0.08
UBE3B-212ENST00000540230 SPTBN4Q9H254 2564 aa15.52■□□□□ 0.08
UBE3B-212ENST00000540230 GON4LQ3T8J9 2241 aa15.52■□□□□ 0.08
UBE3B-212ENST00000540230 A0A1W2PQJ5 194 aa15.52■□□□□ 0.07
UBE3B-212ENST00000540230 SIGLEC16A6NMB1 481 aa15.52■□□□□ 0.07
UBE3B-212ENST00000540230 CCP110O43303 1012 aa15.52■□□□□ 0.07
UBE3B-212ENST00000540230 RHOBTB1O94844 696 aa15.52■□□□□ 0.07
UBE3B-212ENST00000540230 GYPCP04921 128 aa15.52■□□□□ 0.07
UBE3B-212ENST00000540230 GPD1P21695 349 aa15.52■□□□□ 0.07
UBE3B-212ENST00000540230 MPLP40238 635 aa15.52■□□□□ 0.07
UBE3B-212ENST00000540230 PTGER3P43115 390 aa15.52■□□□□ 0.07
UBE3B-212ENST00000540230 OGDHQ02218 1023 aa15.52■□□□□ 0.07
UBE3B-212ENST00000540230 CREB5Q02930 508 aa15.52■□□□□ 0.07
UBE3B-212ENST00000540230 KLHL30Q0D2K2 578 aa15.52■□□□□ 0.07
UBE3B-212ENST00000540230 MTA1Q13330 715 aa15.52■□□□□ 0.07
UBE3B-212ENST00000540230 SF3A2Q15428 464 aaKnown RBP15.52■□□□□ 0.07
UBE3B-212ENST00000540230 CCDC185Q8N715 623 aa15.52■□□□□ 0.07
UBE3B-212ENST00000540230 FAM172AQ8WUF8 416 aa15.52■□□□□ 0.07
UBE3B-212ENST00000540230 CENPIQ92674 756 aaPredicted RBP15.52■□□□□ 0.07
UBE3B-212ENST00000540230 RPL10LQ96L21 214 aaKnown RBP15.52■□□□□ 0.07
UBE3B-212ENST00000540230 PRSS16Q9NQE7 514 aa15.52■□□□□ 0.07
UBE3B-212ENST00000540230 SLCO3A1Q9UIG8 710 aa15.52■□□□□ 0.07
UBE3B-212ENST00000540230 ERVW-1Q9UQF0 538 aa15.52■□□□□ 0.07
UBE3B-212ENST00000540230 IGLV3-10A0A075B6K4 115 aa15.51■□□□□ 0.07
UBE3B-212ENST00000540230 DRGXA6NNA5 263 aa15.51■□□□□ 0.07
UBE3B-212ENST00000540230 TTC34A8MYJ7 566 aa15.51■□□□□ 0.07
UBE3B-212ENST00000540230 E9PAM4 449 aa15.51■□□□□ 0.07
UBE3B-212ENST00000540230 ASLP04424 464 aa15.51■□□□□ 0.07
UBE3B-212ENST00000540230 PLEKP08567 350 aaPredicted RBP15.51■□□□□ 0.07
UBE3B-212ENST00000540230 DHPSP49366 369 aaPredicted RBP15.51■□□□□ 0.07
UBE3B-212ENST00000540230 CDH4P55283 916 aa15.51■□□□□ 0.07
UBE3B-212ENST00000540230 PLA2G2CQ5R387 149 aa15.51■□□□□ 0.07
UBE3B-212ENST00000540230 TCEAL6Q6IPX3 200 aa15.51■□□□□ 0.07
UBE3B-212ENST00000540230 PRR23CQ6ZRP0 262 aa15.51■□□□□ 0.07
UBE3B-212ENST00000540230 STRADAQ7RTN6 431 aa15.51■□□□□ 0.07
UBE3B-212ENST00000540230 TFAP2DQ7Z6R9 452 aa15.51■□□□□ 0.07
UBE3B-212ENST00000540230 C11orf74Q86VG3 221 aa15.51■□□□□ 0.07
UBE3B-212ENST00000540230 OR2T3Q8NH03 318 aa15.51■□□□□ 0.07
UBE3B-212ENST00000540230 TCEAL3Q969E4 200 aa15.51■□□□□ 0.07
UBE3B-212ENST00000540230 SIPA1Q96FS4 1042 aa15.51■□□□□ 0.07
UBE3B-212ENST00000540230 C1orf74Q96LT6 269 aa15.51■□□□□ 0.07
UBE3B-212ENST00000540230 HAPLN3Q96S86 360 aa15.51■□□□□ 0.07
UBE3B-212ENST00000540230 NUP58Q9BVL2 599 aa15.51■□□□□ 0.07
UBE3B-212ENST00000540230 RXFP3Q9NSD7 469 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms