RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 TTC33Q6PID6 262 aaPredicted RBP8.9□□□□□ -0.99
DDB1-217ENST00000540166 RBM23Q86U06 439 aaKnown RBP8.9□□□□□ -0.99
DDB1-217ENST00000540166 ZBTB46Q86UZ6 589 aa8.9□□□□□ -0.99
DDB1-217ENST00000540166 CBWD2Q8IUF1 395 aa8.9□□□□□ -0.99
DDB1-217ENST00000540166 AHI1Q8N157 1196 aa8.9□□□□□ -0.99
DDB1-217ENST00000540166 BBS5Q8N3I7 341 aa8.9□□□□□ -0.99
DDB1-217ENST00000540166 TMCO5AQ8N6Q1 288 aa8.9□□□□□ -0.99
DDB1-217ENST00000540166 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.9□□□□□ -0.99
DDB1-217ENST00000540166 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.9□□□□□ -0.99
DDB1-217ENST00000540166 TRAPPC12Q8WVT3 735 aa8.9□□□□□ -0.99
DDB1-217ENST00000540166 ERLEC1Q96DZ1 483 aa8.9□□□□□ -0.99
DDB1-217ENST00000540166 PCDHB18PQ96TA0 734 aa8.9□□□□□ -0.99
DDB1-217ENST00000540166 GPR20Q99678 358 aa8.9□□□□□ -0.99
DDB1-217ENST00000540166 CNGB3Q9NQW8 809 aa8.9□□□□□ -0.99
DDB1-217ENST00000540166 PLK2Q9NYY3 685 aa8.9□□□□□ -0.99
DDB1-217ENST00000540166 SMCHD1A6NHR9 2005 aa8.9□□□□□ -0.99
DDB1-217ENST00000540166 SLC34A2O95436 690 aa8.89□□□□□ -0.99
DDB1-217ENST00000540166 P4HBP07237 508 aaKnown RBP8.89□□□□□ -0.99
DDB1-217ENST00000540166 SNRPAP09012 282 aaKnown RBP8.89□□□□□ -0.99
DDB1-217ENST00000540166 ENO3P13929 434 aaPredicted RBP8.89□□□□□ -0.99
DDB1-217ENST00000540166 CPA3P15088 417 aa8.89□□□□□ -0.99
DDB1-217ENST00000540166 NUDT2P50583 147 aa8.89□□□□□ -0.99
DDB1-217ENST00000540166 CLCN2P51788 898 aa8.89□□□□□ -0.99
DDB1-217ENST00000540166 NRF1Q16656 503 aa8.89□□□□□ -0.99
DDB1-217ENST00000540166 ADGRG6Q86SQ4 1221 aa8.89□□□□□ -0.99
DDB1-217ENST00000540166 SRPK1Q96SB4 655 aaKnown RBP8.89□□□□□ -0.99
DDB1-217ENST00000540166 GIN1Q9NXP7 522 aa8.89□□□□□ -0.99
DDB1-217ENST00000540166 PSMD13Q9UNM6 376 aa8.89□□□□□ -0.99
DDB1-217ENST00000540166 NAV1Q8NEY1 1877 aa8.89□□□□□ -0.99
DDB1-217ENST00000540166 F2P00734 622 aa8.89□□□□□ -0.99
DDB1-217ENST00000540166 SERPINA6P08185 405 aa8.89□□□□□ -0.99
DDB1-217ENST00000540166 TCN1P20061 433 aaPredicted RBP8.89□□□□□ -0.99
DDB1-217ENST00000540166 STT3AP46977 705 aa8.89□□□□□ -0.99
DDB1-217ENST00000540166 RPL26P61254 145 aaKnown RBP8.89□□□□□ -0.99
DDB1-217ENST00000540166 PSMC5P62195 406 aa8.89□□□□□ -0.99
DDB1-217ENST00000540166 CASC4Q6P4E1 433 aa8.89□□□□□ -0.99
DDB1-217ENST00000540166 KYAT3Q6YP21 454 aaKnown RBP8.89□□□□□ -0.99
DDB1-217ENST00000540166 HPS6Q86YV9 775 aa8.89□□□□□ -0.99
DDB1-217ENST00000540166 NDUFAF2Q8N183 169 aa8.89□□□□□ -0.99
DDB1-217ENST00000540166 SIX5Q8N196 739 aa8.89□□□□□ -0.99
DDB1-217ENST00000540166 SIX6OS1Q8N1H7 587 aa8.89□□□□□ -0.99
DDB1-217ENST00000540166 TTC16Q8NEE8 873 aa8.89□□□□□ -0.99
DDB1-217ENST00000540166 TSNARE1Q96NA8 513 aa8.89□□□□□ -0.99
DDB1-217ENST00000540166 MRPL46Q9H2W6 279 aaKnown RBP8.89□□□□□ -0.99
DDB1-217ENST00000540166 ADA2Q9NZK5 511 aa8.89□□□□□ -0.99
DDB1-217ENST00000540166 HSFX1Q9UBD0 423 aa8.89□□□□□ -0.99
DDB1-217ENST00000540166 ZNF229Q9UJW7 825 aa8.89□□□□□ -0.99
DDB1-217ENST00000540166 PACSIN3Q9UKS6 424 aa8.89□□□□□ -0.99
DDB1-217ENST00000540166 SORCS3Q9UPU3 1222 aa8.89□□□□□ -0.99
DDB1-217ENST00000540166 VILLO15195 856 aa8.89□□□□□ -0.99
DDB1-217ENST00000540166 CRTAMO95727 393 aa8.89□□□□□ -0.99
DDB1-217ENST00000540166 VTNP04004 478 aa8.89□□□□□ -0.99
DDB1-217ENST00000540166 TFAP2AP05549 437 aa8.89□□□□□ -0.99
DDB1-217ENST00000540166 NELFEP18615 380 aaKnown RBP8.89□□□□□ -0.99
DDB1-217ENST00000540166 PBX2P40425 430 aa8.89□□□□□ -0.99
DDB1-217ENST00000540166 QARSP47897 775 aaKnown RBP8.89□□□□□ -0.99
DDB1-217ENST00000540166 LIG4P49917 911 aa8.89□□□□□ -0.99
DDB1-217ENST00000540166 CLCN3P51790 818 aa8.89□□□□□ -0.99
DDB1-217ENST00000540166 PRKCEQ02156 737 aa8.89□□□□□ -0.99
DDB1-217ENST00000540166 PDK1Q15118 436 aa8.89□□□□□ -0.99
DDB1-217ENST00000540166 RALGPS1Q5JS13 557 aa8.89□□□□□ -0.99
DDB1-217ENST00000540166 GPR153Q6NV75 609 aa8.89□□□□□ -0.99
DDB1-217ENST00000540166 RHBDF2Q6PJF5 856 aa8.89□□□□□ -0.99
DDB1-217ENST00000540166 C16orf89Q6UX73 402 aa8.89□□□□□ -0.99
DDB1-217ENST00000540166 HSD17B14Q9BPX1 270 aa8.89□□□□□ -0.99
DDB1-217ENST00000540166 FAM213AQ9BRX8 229 aa8.89□□□□□ -0.99
DDB1-217ENST00000540166 MFSD1Q9H3U5 465 aa8.89□□□□□ -0.99
DDB1-217ENST00000540166 GPRC5CQ9NQ84 441 aa8.89□□□□□ -0.99
DDB1-217ENST00000540166 CXXC1Q9P0U4 656 aaPredicted RBP8.89□□□□□ -0.99
DDB1-217ENST00000540166 WARS2Q9UGM6 360 aaKnown RBP8.89□□□□□ -0.99
DDB1-217ENST00000540166 SHOC2Q9UQ13 582 aa8.89□□□□□ -0.99
DDB1-217ENST00000540166 DNAJC16Q9Y2G8 782 aa8.89□□□□□ -0.99
DDB1-217ENST00000540166 RNF103-CHMP3A0A140T963 221 aa8.88□□□□□ -0.99
DDB1-217ENST00000540166 ATP5BP06576 529 aaKnown RBP8.88□□□□□ -0.99
DDB1-217ENST00000540166 GTF2H1P32780 548 aa8.88□□□□□ -0.99
DDB1-217ENST00000540166 BCAP31P51572 246 aa8.88□□□□□ -0.99
DDB1-217ENST00000540166 CTC1Q2NKJ3 1217 aa8.88□□□□□ -0.99
DDB1-217ENST00000540166 ZFP1Q6P2D0 407 aa8.88□□□□□ -0.99
DDB1-217ENST00000540166 TMEM270Q6UE05 265 aa8.88□□□□□ -0.99
DDB1-217ENST00000540166 DPH6Q7L8W6 267 aa8.88□□□□□ -0.99
DDB1-217ENST00000540166 PPIL6Q8IXY8 311 aa8.88□□□□□ -0.99
DDB1-217ENST00000540166 SLCO2A1Q92959 643 aa8.88□□□□□ -0.99
DDB1-217ENST00000540166 ANKRD36BP1Q96IX9 119 aa8.88□□□□□ -0.99
DDB1-217ENST00000540166 SPATA17Q96L03 361 aa8.88□□□□□ -0.99
DDB1-217ENST00000540166 ARMC7Q9H6L4 198 aa8.88□□□□□ -0.99
DDB1-217ENST00000540166 TOPORSQ9NS56 1045 aaPredicted RBP8.88□□□□□ -0.99
DDB1-217ENST00000540166 ZDHHC7Q9NXF8 308 aa8.88□□□□□ -0.99
DDB1-217ENST00000540166 ADAMTS6Q9UKP5 1117 aa8.88□□□□□ -0.99
DDB1-217ENST00000540166 GRID1Q9ULK0 1009 aa8.88□□□□□ -0.99
DDB1-217ENST00000540166 HEY1Q9Y5J3 304 aa8.88□□□□□ -0.99
DDB1-217ENST00000540166 UBE4BO95155 1302 aa8.88□□□□□ -0.99
DDB1-217ENST00000540166 MYOCOSA0A1B0GUC4 107 aa8.88□□□□□ -0.99
DDB1-217ENST00000540166 ALOX15BO15296 676 aa8.88□□□□□ -0.99
DDB1-217ENST00000540166 TYROBPO43914 113 aa8.88□□□□□ -0.99
DDB1-217ENST00000540166 JAK1P23458 1154 aa8.88□□□□□ -0.99
DDB1-217ENST00000540166 GRIA2P42262 883 aa8.88□□□□□ -0.99
DDB1-217ENST00000540166 HADHBP55084 474 aaKnown RBP8.88□□□□□ -0.99
DDB1-217ENST00000540166 PLOD1Q02809 727 aaPredicted RBP8.88□□□□□ -0.99
DDB1-217ENST00000540166 HNRNPDQ14103 355 aaKnown RBP8.88□□□□□ -0.99
DDB1-217ENST00000540166 EFTUD2Q15029 972 aaKnown RBP eCLIP8.88□□□□□ -0.991e-6■■■■□ 23
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms