RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 ACSS3Q9H6R3 686 aa23.03■■□□□ 1.28
HOMER3-204ENST00000539827 SPG21Q9NZD8 308 aa23.03■■□□□ 1.28
HOMER3-204ENST00000539827 IGSF9Q9P2J2 1179 aa23.03■■□□□ 1.28
HOMER3-204ENST00000539827 VANGL2Q9ULK5 521 aa23.03■■□□□ 1.28
HOMER3-204ENST00000539827 ZBTB24O43167 697 aaPredicted RBP23.03■■□□□ 1.28
HOMER3-204ENST00000539827 LAG3P18627 525 aa23.03■■□□□ 1.28
HOMER3-204ENST00000539827 COG7P83436 770 aa23.03■■□□□ 1.28
HOMER3-204ENST00000539827 SPARCL1Q14515 664 aa23.03■■□□□ 1.28
HOMER3-204ENST00000539827 USP33Q8TEY7 942 aa23.03■■□□□ 1.28
HOMER3-204ENST00000539827 SIGLEC10Q96LC7 697 aa23.03■■□□□ 1.28
HOMER3-204ENST00000539827 C1orf74Q96LT6 269 aa23.03■■□□□ 1.28
HOMER3-204ENST00000539827 AGAP3Q96P47 875 aa23.03■■□□□ 1.28
HOMER3-204ENST00000539827 CYP4F11Q9HBI6 524 aa23.03■■□□□ 1.28
HOMER3-204ENST00000539827 ZC3H7BQ9UGR2 993 aaKnown RBP23.03■■□□□ 1.28
HOMER3-204ENST00000539827 TLR5O60602 858 aa23.02■■□□□ 1.28
HOMER3-204ENST00000539827 MAGEA3P43357 314 aa23.02■■□□□ 1.28
HOMER3-204ENST00000539827 GEMIN4P57678 1058 aaKnown RBP23.02■■□□□ 1.28
HOMER3-204ENST00000539827 NRG1Q02297 640 aaPredicted RBP23.02■■□□□ 1.28
HOMER3-204ENST00000539827 MS4A13Q5J8X5 152 aa23.02■■□□□ 1.28
HOMER3-204ENST00000539827 TADA2BQ86TJ2 420 aa23.02■■□□□ 1.28
HOMER3-204ENST00000539827 YME1L1Q96TA2 773 aa23.02■■□□□ 1.28
HOMER3-204ENST00000539827 TMEM106CQ9BVX2 250 aa23.02■■□□□ 1.28
HOMER3-204ENST00000539827 UBE2OQ9C0C9 1292 aaKnown RBP23.02■■□□□ 1.28
HOMER3-204ENST00000539827 XAB2Q9HCS7 855 aaKnown RBP23.02■■□□□ 1.28
HOMER3-204ENST00000539827 PIH1D1Q9NWS0 290 aaKnown RBP23.02■■□□□ 1.28
HOMER3-204ENST00000539827 SLC24A2Q9UI40 661 aa23.02■■□□□ 1.28
HOMER3-204ENST00000539827 KIAA0100Q14667 2235 aaKnown RBP23.02■■□□□ 1.28
HOMER3-204ENST00000539827 ABLIM3O94929 683 aa23.01■■□□□ 1.27
HOMER3-204ENST00000539827 CPP00450 1065 aa23.01■■□□□ 1.27
HOMER3-204ENST00000539827 JCHAINP01591 159 aa23.01■■□□□ 1.27
HOMER3-204ENST00000539827 DNAJB2P25686 324 aa23.01■■□□□ 1.27
HOMER3-204ENST00000539827 SARNPP82979 210 aaKnown RBP23.01■■□□□ 1.27
HOMER3-204ENST00000539827 KLHL38Q2WGJ6 581 aa23.01■■□□□ 1.27
HOMER3-204ENST00000539827 SRRM1Q8IYB3 904 aaKnown RBP23.01■■□□□ 1.27
HOMER3-204ENST00000539827 ZNF461Q8TAF7 563 aa23.01■■□□□ 1.27
HOMER3-204ENST00000539827 PPANQ9NQ55 473 aaKnown RBP23.01■■□□□ 1.27
HOMER3-204ENST00000539827 TMEM51Q9NW97 253 aa23.01■■□□□ 1.27
HOMER3-204ENST00000539827 RSPH14Q9UHP6 348 aa23.01■■□□□ 1.27
HOMER3-204ENST00000539827 MAD1L1Q9Y6D9 718 aa23.01■■□□□ 1.27
HOMER3-204ENST00000539827 EFCAB14O75071 495 aa23.01■■□□□ 1.27
HOMER3-204ENST00000539827 ZNF189O75820 626 aaPredicted RBP23.01■■□□□ 1.27
HOMER3-204ENST00000539827 CD68P34810 354 aaPredicted RBP23.01■■□□□ 1.27
HOMER3-204ENST00000539827 TEX44Q53QW1 395 aa23.01■■□□□ 1.27
HOMER3-204ENST00000539827 RAP1GAP2Q684P5 730 aa23.01■■□□□ 1.27
HOMER3-204ENST00000539827 ZNF683Q8IZ20 524 aa23.01■■□□□ 1.27
HOMER3-204ENST00000539827 RTL3Q8N8U3 475 aaKnown RBP23.01■■□□□ 1.27
HOMER3-204ENST00000539827 GORASP1Q9BQQ3 440 aa23.01■■□□□ 1.27
HOMER3-204ENST00000539827 TRIM56Q9BRZ2 755 aaKnown RBP23.01■■□□□ 1.27
HOMER3-204ENST00000539827 KCNK9Q9NPC2 374 aa23.01■■□□□ 1.27
HOMER3-204ENST00000539827 EIF2B3Q9NR50 452 aaKnown RBP23.01■■□□□ 1.27
HOMER3-204ENST00000539827 PSMC3IPQ9P2W1 217 aaPredicted RBP23.01■■□□□ 1.27
HOMER3-204ENST00000539827 TCRBV9S1A1TA0A576 114 aa23■■□□□ 1.27
HOMER3-204ENST00000539827 ZBBXA8MT70 800 aa23■■□□□ 1.27
HOMER3-204ENST00000539827 MTSS1O43312 755 aa23■■□□□ 1.27
HOMER3-204ENST00000539827 CDK16Q00536 496 aa23■■□□□ 1.27
HOMER3-204ENST00000539827 OLIG2Q13516 323 aa23■■□□□ 1.27
HOMER3-204ENST00000539827 DDX53Q86TM3 631 aaKnown RBP23■■□□□ 1.27
HOMER3-204ENST00000539827 ATPAF2Q8N5M1 289 aa23■■□□□ 1.27
HOMER3-204ENST00000539827 LZTR1Q8N653 840 aa23■■□□□ 1.27
HOMER3-204ENST00000539827 ZNF512Q96ME7 567 aaPredicted RBP23■■□□□ 1.27
HOMER3-204ENST00000539827 PAFAH2Q99487 392 aa23■■□□□ 1.27
HOMER3-204ENST00000539827 PLAC1Q9HBJ0 212 aa23■■□□□ 1.27
HOMER3-204ENST00000539827 TTLL3Q9Y4R7 772 aa23■■□□□ 1.27
HOMER3-204ENST00000539827 URODP06132 367 aa23■■□□□ 1.27
HOMER3-204ENST00000539827 BRAFP15056 766 aa23■■□□□ 1.27
HOMER3-204ENST00000539827 NFKB1P19838 968 aa23■■□□□ 1.27
HOMER3-204ENST00000539827 SEC24CP53992 1094 aa23■■□□□ 1.27
HOMER3-204ENST00000539827 SESN2P58004 480 aaPredicted RBP23■■□□□ 1.27
HOMER3-204ENST00000539827 LRRC8BQ6P9F7 803 aa23■■□□□ 1.27
HOMER3-204ENST00000539827 PRPF39Q86UA1 669 aaKnown RBP23■■□□□ 1.27
HOMER3-204ENST00000539827 LRRC39Q96DD0 335 aa23■■□□□ 1.27
HOMER3-204ENST00000539827 BTN2A3PQ96KV6 586 aa23■■□□□ 1.27
HOMER3-204ENST00000539827 EBNA1BP2Q99848 306 aaKnown RBP23■■□□□ 1.27
HOMER3-204ENST00000539827 IL23AQ9NPF7 189 aa23■■□□□ 1.27
HOMER3-204ENST00000539827 GOLGA6L7A0A1B0GV03 622 aa22.99■■□□□ 1.27
HOMER3-204ENST00000539827 RASA4BC9J798 803 aa22.99■■□□□ 1.27
HOMER3-204ENST00000539827 RASA4O43374 803 aa22.99■■□□□ 1.27
HOMER3-204ENST00000539827 CNTN5O94779 1100 aa22.99■■□□□ 1.27
HOMER3-204ENST00000539827 IGLV3-27P01718 113 aa22.99■■□□□ 1.27
HOMER3-204ENST00000539827 HMGA1P17096 107 aaKnown RBP22.99■■□□□ 1.27
HOMER3-204ENST00000539827 MSH2P43246 934 aa22.99■■□□□ 1.27
HOMER3-204ENST00000539827 TPGS2Q68CL5 300 aa22.99■■□□□ 1.27
HOMER3-204ENST00000539827 UNC5AQ6ZN44 842 aa22.99■■□□□ 1.27
HOMER3-204ENST00000539827 TFAP2DQ7Z6R9 452 aa22.99■■□□□ 1.27
HOMER3-204ENST00000539827 ZSCAN18Q8TBC5 510 aaPredicted RBP22.99■■□□□ 1.27
HOMER3-204ENST00000539827 MGARPQ8TDB4 240 aa22.99■■□□□ 1.27
HOMER3-204ENST00000539827 DPF3Q92784 378 aa22.99■■□□□ 1.27
HOMER3-204ENST00000539827 CYTH2Q99418 400 aa22.99■■□□□ 1.27
HOMER3-204ENST00000539827 GBA3Q9H227 469 aa22.99■■□□□ 1.27
HOMER3-204ENST00000539827 PPCSQ9HAB8 311 aa22.99■■□□□ 1.27
HOMER3-204ENST00000539827 TRHDEQ9UKU6 1024 aa22.99■■□□□ 1.27
HOMER3-204ENST00000539827 YIPF1Q9Y548 306 aa22.99■■□□□ 1.27
HOMER3-204ENST00000539827 PTPRSQ13332 1948 aa22.98■■□□□ 1.27
HOMER3-204ENST00000539827 TMEM120BA0PK00 339 aa22.98■■□□□ 1.27
HOMER3-204ENST00000539827 WASH4PA8MWX3 477 aa22.98■■□□□ 1.27
HOMER3-204ENST00000539827 SPAG6O75602 509 aa22.98■■□□□ 1.27
HOMER3-204ENST00000539827 GJB5O95377 273 aa22.98■■□□□ 1.27
HOMER3-204ENST00000539827 KRT15P19012 456 aa22.98■■□□□ 1.27
HOMER3-204ENST00000539827 CCNCP24863 283 aa22.98■■□□□ 1.27
HOMER3-204ENST00000539827 KCNQ1P51787 676 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms