RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 C2orf49Q9BVC5 232 aaPredicted RBP12.11□□□□□ -0.47
VTN-202ENST00000539746 ADAM7Q9H2U9 754 aa12.11□□□□□ -0.47
VTN-202ENST00000539746 EPB41L5Q9HCM4 733 aa12.11□□□□□ -0.47
VTN-202ENST00000539746 GPATCH2LQ9NWQ4 482 aa12.11□□□□□ -0.47
VTN-202ENST00000539746 VANGL2Q9ULK5 521 aa12.11□□□□□ -0.47
VTN-202ENST00000539746 AAR2Q9Y312 384 aaKnown RBP12.11□□□□□ -0.47
VTN-202ENST00000539746 MYO16Q9Y6X6 1858 aa12.1□□□□□ -0.47
VTN-202ENST00000539746 H0Y626 953 aa12.1□□□□□ -0.47
VTN-202ENST00000539746 EIF3HO15372 352 aaKnown RBP eCLIP12.1□□□□□ -0.47
VTN-202ENST00000539746 KCNN4O15554 427 aa12.1□□□□□ -0.47
VTN-202ENST00000539746 TTI1O43156 1089 aa12.1□□□□□ -0.47
VTN-202ENST00000539746 RAD51CO43502 376 aa12.1□□□□□ -0.47
VTN-202ENST00000539746 ANXA9O76027 345 aa12.1□□□□□ -0.47
VTN-202ENST00000539746 AMPD1P23109 780 aa12.1□□□□□ -0.47
VTN-202ENST00000539746 IL4RP24394 825 aa12.1□□□□□ -0.47
VTN-202ENST00000539746 GARSP41250 739 aaKnown RBP12.1□□□□□ -0.47
VTN-202ENST00000539746 LMAN1P49257 510 aa12.1□□□□□ -0.47
VTN-202ENST00000539746 SNX1Q13596 522 aa12.1□□□□□ -0.47
VTN-202ENST00000539746 SIX1Q15475 284 aaPredicted RBP12.1□□□□□ -0.47
VTN-202ENST00000539746 ELF2Q15723 593 aa12.1□□□□□ -0.47
VTN-202ENST00000539746 PUS10Q3MIT2 529 aaKnown RBP12.1□□□□□ -0.47
VTN-202ENST00000539746 DNAJC21Q5F1R6 531 aaKnown RBP12.1□□□□□ -0.47
VTN-202ENST00000539746 RALGPS1Q5JS13 557 aa12.1□□□□□ -0.47
VTN-202ENST00000539746 PRPF38BQ5VTL8 546 aaKnown RBP12.1□□□□□ -0.47
VTN-202ENST00000539746 TXNDC8Q6A555 127 aa12.1□□□□□ -0.47
VTN-202ENST00000539746 FBXL22Q6P050 247 aa12.1□□□□□ -0.47
VTN-202ENST00000539746 GAREM2Q75VX8 874 aa12.1□□□□□ -0.47
VTN-202ENST00000539746 OTOP3Q7RTS5 596 aa12.1□□□□□ -0.47
VTN-202ENST00000539746 GRASPQ7Z6J2 395 aaPredicted RBP12.1□□□□□ -0.47
VTN-202ENST00000539746 LINC00523Q86TU6 105 aa12.1□□□□□ -0.47
VTN-202ENST00000539746 ZNF354CQ86Y25 554 aa12.1□□□□□ -0.47
VTN-202ENST00000539746 CCNJLQ8IV13 435 aa12.1□□□□□ -0.47
VTN-202ENST00000539746 FAM217AQ8IXS0 508 aa12.1□□□□□ -0.47
VTN-202ENST00000539746 PPIL6Q8IXY8 311 aa12.1□□□□□ -0.47
VTN-202ENST00000539746 YAF2Q8IY57 180 aa12.1□□□□□ -0.47
VTN-202ENST00000539746 PQLC3Q8N755 202 aa12.1□□□□□ -0.47
VTN-202ENST00000539746 ARL14EPQ8N8R7 260 aaPredicted RBP12.1□□□□□ -0.47
VTN-202ENST00000539746 NOA1Q8NC60 698 aaKnown RBP12.1□□□□□ -0.47
VTN-202ENST00000539746 SHKBP1Q8TBC3 707 aa12.1□□□□□ -0.47
VTN-202ENST00000539746 DEPDC1BQ8WUY9 529 aa12.1□□□□□ -0.47
VTN-202ENST00000539746 SMARCD2Q92925 531 aa12.1□□□□□ -0.47
VTN-202ENST00000539746 NXPE3Q969Y0 559 aa12.1□□□□□ -0.47
VTN-202ENST00000539746 ACDQ96AP0 544 aa12.1□□□□□ -0.47
VTN-202ENST00000539746 TTC25Q96NG3 672 aa12.1□□□□□ -0.47
VTN-202ENST00000539746 OLFM3Q96PB7 478 aa12.1□□□□□ -0.47
VTN-202ENST00000539746 XPO6Q96QU8 1125 aaKnown RBP12.1□□□□□ -0.47
VTN-202ENST00000539746 RUFY1Q96T51 708 aa12.1□□□□□ -0.47
VTN-202ENST00000539746 FMO2Q99518 471 aa12.1□□□□□ -0.47
VTN-202ENST00000539746 NAT9Q9BTE0 207 aa12.1□□□□□ -0.47
VTN-202ENST00000539746 LRRC3Q9BY71 257 aa12.1□□□□□ -0.47
VTN-202ENST00000539746 PARD6BQ9BYG5 372 aa12.1□□□□□ -0.47
VTN-202ENST00000539746 PPCSQ9HAB8 311 aa12.1□□□□□ -0.47
VTN-202ENST00000539746 SP110Q9HB58 689 aa12.1□□□□□ -0.47
VTN-202ENST00000539746 TRPV4Q9HBA0 871 aa12.1□□□□□ -0.47
VTN-202ENST00000539746 XAB2Q9HCS7 855 aaKnown RBP12.1□□□□□ -0.47
VTN-202ENST00000539746 GDF3Q9NR23 364 aa12.1□□□□□ -0.47
VTN-202ENST00000539746 DTLQ9NZJ0 730 aa12.1□□□□□ -0.47
VTN-202ENST00000539746 CFAP97Q9P2B7 532 aa12.1□□□□□ -0.47
VTN-202ENST00000539746 DNMT3BQ9UBC3 853 aaKnown RBP12.1□□□□□ -0.47
VTN-202ENST00000539746 ANAPC5Q9UJX4 755 aa12.1□□□□□ -0.47
VTN-202ENST00000539746 AGO1Q9UL18 857 aaKnown RBP12.1□□□□□ -0.47
VTN-202ENST00000539746 DNPEPQ9ULA0 475 aa12.1□□□□□ -0.47
VTN-202ENST00000539746 TPX2Q9ULW0 747 aaKnown RBP12.1□□□□□ -0.47
VTN-202ENST00000539746 A0A0A0MRY4 1105 aa12.09□□□□□ -0.47
VTN-202ENST00000539746 C2orf78A6NCI8 922 aa12.09□□□□□ -0.47
VTN-202ENST00000539746 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.09□□□□□ -0.47
VTN-202ENST00000539746 LEFTY2O00292 366 aa12.09□□□□□ -0.47
VTN-202ENST00000539746 PER2O15055 1255 aa12.09□□□□□ -0.47
VTN-202ENST00000539746 MATN3O15232 486 aa12.09□□□□□ -0.47
VTN-202ENST00000539746 CHADO15335 359 aa12.09□□□□□ -0.47
VTN-202ENST00000539746 TBX18O95935 607 aa12.09□□□□□ -0.47
VTN-202ENST00000539746 RHOCP08134 193 aa12.09□□□□□ -0.47
VTN-202ENST00000539746 CD48P09326 243 aa12.09□□□□□ -0.47
VTN-202ENST00000539746 IFNAR2P48551 515 aa12.09□□□□□ -0.47
VTN-202ENST00000539746 ATXN1P54253 815 aaKnown RBP12.09□□□□□ -0.47
VTN-202ENST00000539746 PITX1P78337 314 aaPredicted RBP12.09□□□□□ -0.47
VTN-202ENST00000539746 IL10RBQ08334 325 aa12.09□□□□□ -0.47
VTN-202ENST00000539746 MMRN1Q13201 1228 aa12.09□□□□□ -0.47
VTN-202ENST00000539746 HNRNPDQ14103 355 aaKnown RBP12.09□□□□□ -0.47
VTN-202ENST00000539746 PRKD1Q15139 912 aaPredicted RBP12.09□□□□□ -0.47
VTN-202ENST00000539746 CA9Q16790 459 aa12.09□□□□□ -0.47
VTN-202ENST00000539746 PARP6Q2NL67 630 aa12.09□□□□□ -0.47
VTN-202ENST00000539746 PRSS36Q5K4E3 855 aa12.09□□□□□ -0.47
VTN-202ENST00000539746 PIK3R6Q5UE93 754 aa12.09□□□□□ -0.47
VTN-202ENST00000539746 RAP1GAP2Q684P5 730 aa12.09□□□□□ -0.47
VTN-202ENST00000539746 DUPD1Q68J44 220 aa12.09□□□□□ -0.47
VTN-202ENST00000539746 ZC3H18Q86VM9 953 aaKnown RBP12.09□□□□□ -0.47
VTN-202ENST00000539746 PDIK1LQ8N165 341 aa12.09□□□□□ -0.47
VTN-202ENST00000539746 TDRD5Q8NAT2 981 aaKnown RBP12.09□□□□□ -0.47
VTN-202ENST00000539746 SH3RF2Q8TEC5 729 aa12.09□□□□□ -0.47
VTN-202ENST00000539746 DDI1Q8WTU0 396 aa12.09□□□□□ -0.47
VTN-202ENST00000539746 IFT81Q8WYA0 676 aa12.09□□□□□ -0.47
VTN-202ENST00000539746 LRRC39Q96DD0 335 aa12.09□□□□□ -0.47
VTN-202ENST00000539746 PABPC5Q96DU9 382 aaKnown RBP12.09□□□□□ -0.47
VTN-202ENST00000539746 SPATA13Q96N96 652 aa12.09□□□□□ -0.47
VTN-202ENST00000539746 PRMT1Q99873 361 aaKnown RBP12.09□□□□□ -0.47
VTN-202ENST00000539746 CCDC77Q9BR77 488 aa12.09□□□□□ -0.47
VTN-202ENST00000539746 PRO3102Q9H379 93 aa12.09□□□□□ -0.47
VTN-202ENST00000539746 CERS4Q9HA82 394 aa12.09□□□□□ -0.47
VTN-202ENST00000539746 ZNF334Q9HCZ1 680 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms