RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 SYNCQ9H7C4 482 aa17.32■□□□□ 0.36
DDB1-215ENST00000539712 KIAA1522Q9P206 1035 aaPredicted RBP17.32■□□□□ 0.36
DDB1-215ENST00000539712 SUN2Q9UH99 717 aa17.32■□□□□ 0.36
DDB1-215ENST00000539712 HS3ST4Q9Y661 456 aa17.32■□□□□ 0.36
DDB1-215ENST00000539712 SLCO1B1Q9Y6L6 691 aa17.32■□□□□ 0.36
DDB1-215ENST00000539712 AKAP13Q12802 2813 aa17.32■□□□□ 0.36
DDB1-215ENST00000539712 TYW5A2RUC4 315 aaKnown RBP17.31■□□□□ 0.36
DDB1-215ENST00000539712 LRRC10BA6NIK2 292 aa17.31■□□□□ 0.36
DDB1-215ENST00000539712 TTC34A8MYJ7 566 aa17.31■□□□□ 0.36
DDB1-215ENST00000539712 H0Y626 953 aa17.31■□□□□ 0.36
DDB1-215ENST00000539712 ARHGAP33O14559 1287 aa17.31■□□□□ 0.36
DDB1-215ENST00000539712 SIN3BO75182 1162 aa17.31■□□□□ 0.36
DDB1-215ENST00000539712 PAGE1O75459 146 aa17.31■□□□□ 0.36
DDB1-215ENST00000539712 ADCY5O95622 1261 aa17.31■□□□□ 0.36
DDB1-215ENST00000539712 ACADMP11310 421 aa17.31■□□□□ 0.36
DDB1-215ENST00000539712 ZNF18P17022 549 aa17.31■□□□□ 0.36
DDB1-215ENST00000539712 CSRP1P21291 193 aaKnown RBP17.31■□□□□ 0.36
DDB1-215ENST00000539712 ABCB4P21439 1286 aa17.31■□□□□ 0.36
DDB1-215ENST00000539712 MZF1P28698 734 aaPredicted RBP17.31■□□□□ 0.36
DDB1-215ENST00000539712 PMLP29590 882 aa17.31■□□□□ 0.36
DDB1-215ENST00000539712 SCNN1AP37088 669 aa17.31■□□□□ 0.36
DDB1-215ENST00000539712 PLK1P53350 603 aa17.31■□□□□ 0.36
DDB1-215ENST00000539712 SNX16P57768 344 aa17.31■□□□□ 0.36
DDB1-215ENST00000539712 NOMO3P69849 1222 aa17.31■□□□□ 0.36
DDB1-215ENST00000539712 ECT2LQ008S8 904 aa17.31■□□□□ 0.36
DDB1-215ENST00000539712 CENPCQ03188 943 aa17.31■□□□□ 0.36
DDB1-215ENST00000539712 ZBTB16Q05516 673 aa17.31■□□□□ 0.36
DDB1-215ENST00000539712 GFPT1Q06210 699 aaPredicted RBP17.31■□□□□ 0.36
DDB1-215ENST00000539712 SEMA3BQ13214 749 aa17.31■□□□□ 0.36
DDB1-215ENST00000539712 UAP1L1Q3KQV9 507 aa17.31■□□□□ 0.36
DDB1-215ENST00000539712 SYCP2LQ5T4T6 812 aa17.31■□□□□ 0.36
DDB1-215ENST00000539712 SH3PXD2AQ5TCZ1 1133 aa17.31■□□□□ 0.36
DDB1-215ENST00000539712 BNIPLQ7Z465 357 aa17.31■□□□□ 0.36
DDB1-215ENST00000539712 PIP4P1Q86T03 277 aa17.31■□□□□ 0.36
DDB1-215ENST00000539712 ZNF683Q8IZ20 524 aa17.31■□□□□ 0.36
DDB1-215ENST00000539712 SLC20A1Q8WUM9 679 aa17.31■□□□□ 0.36
DDB1-215ENST00000539712 CPA5Q8WXQ8 436 aa17.31■□□□□ 0.36
DDB1-215ENST00000539712 PGAP3Q96FM1 320 aaPredicted RBP17.31■□□□□ 0.36
DDB1-215ENST00000539712 C6orf106Q9H6K1 298 aaPredicted RBP17.31■□□□□ 0.36
DDB1-215ENST00000539712 FBRSQ9HAH7 460 aa17.31■□□□□ 0.36
DDB1-215ENST00000539712 FAM207AQ9NSI2 230 aaPredicted RBP17.31■□□□□ 0.36
DDB1-215ENST00000539712 ARHGEF38Q9NXL2 777 aa17.31■□□□□ 0.36
DDB1-215ENST00000539712 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.31■□□□□ 0.36
DDB1-215ENST00000539712 LIMA1Q9UHB6 759 aaKnown RBP17.31■□□□□ 0.36
DDB1-215ENST00000539712 SLC12A6Q9UHW9 1150 aa17.31■□□□□ 0.36
DDB1-215ENST00000539712 TMEM59LQ9UK28 342 aa17.31■□□□□ 0.36
DDB1-215ENST00000539712 CEP83Q9Y592 693 aa17.31■□□□□ 0.36
DDB1-215ENST00000539712 ITIH6Q6UXX5 1313 aa17.3■□□□□ 0.36
DDB1-215ENST00000539712 C10orf142B7Z368 130 aa17.3■□□□□ 0.36
DDB1-215ENST00000539712 GJB3O75712 270 aa17.3■□□□□ 0.36
DDB1-215ENST00000539712 LSM8O95777 96 aaKnown RBP17.3■□□□□ 0.36
DDB1-215ENST00000539712 SRPRAP08240 638 aaKnown RBP17.3■□□□□ 0.36
DDB1-215ENST00000539712 KCNA4P22459 653 aa17.3■□□□□ 0.36
DDB1-215ENST00000539712 FLT3P36888 993 aa17.3■□□□□ 0.36
DDB1-215ENST00000539712 GGCXP38435 758 aa17.3■□□□□ 0.36
DDB1-215ENST00000539712 NUMBP49757 651 aa17.3■□□□□ 0.36
DDB1-215ENST00000539712 NOVA1P51513 510 aaKnown RBP17.3■□□□□ 0.36
DDB1-215ENST00000539712 COPB1P53618 953 aaKnown RBP17.3■□□□□ 0.36
DDB1-215ENST00000539712 RNASE9P60153 205 aaKnown RBP17.3■□□□□ 0.36
DDB1-215ENST00000539712 POLR2FP61218 127 aaKnown RBP17.3■□□□□ 0.36
DDB1-215ENST00000539712 WDR45BQ5MNZ6 344 aa17.3■□□□□ 0.36
DDB1-215ENST00000539712 DCAF12L1Q5VU92 463 aa17.3■□□□□ 0.36
DDB1-215ENST00000539712 RABEPKQ7Z6M1 372 aa17.3■□□□□ 0.36
DDB1-215ENST00000539712 ERICH1Q86X53 443 aa17.3■□□□□ 0.36
DDB1-215ENST00000539712 RGL4Q8IZJ4 473 aa17.3■□□□□ 0.36
DDB1-215ENST00000539712 RNF34Q969K3 372 aa17.3■□□□□ 0.36
DDB1-215ENST00000539712 RPL10LQ96L21 214 aaKnown RBP17.3■□□□□ 0.36
DDB1-215ENST00000539712 CNTNAP3BQ96NU0 1288 aa17.3■□□□□ 0.36
DDB1-215ENST00000539712 FAM129BQ96TA1 746 aa17.3■□□□□ 0.36
DDB1-215ENST00000539712 CNTNAP3Q9BZ76 1288 aa17.3■□□□□ 0.36
DDB1-215ENST00000539712 ANO10Q9NW15 660 aa17.3■□□□□ 0.36
DDB1-215ENST00000539712 VANGL2Q9ULK5 521 aa17.3■□□□□ 0.36
DDB1-215ENST00000539712 OR51B4Q9Y5P0 310 aa17.3■□□□□ 0.36
DDB1-215ENST00000539712 SNX10Q9Y5X0 201 aa17.3■□□□□ 0.36
DDB1-215ENST00000539712 KMT2BQ9UMN6 2715 aaPredicted RBP17.3■□□□□ 0.36
DDB1-215ENST00000539712 MAP1BP46821 2468 aaKnown RBP17.29■□□□□ 0.36
DDB1-215ENST00000539712 A0A1B0GVM2 712 aa17.29■□□□□ 0.36
DDB1-215ENST00000539712 TCAF2A6NFQ2 919 aa17.29■□□□□ 0.36
DDB1-215ENST00000539712 UPK3BL1B0FP48 263 aa17.29■□□□□ 0.36
DDB1-215ENST00000539712 UPK3BL2E5RIL1 263 aa17.29■□□□□ 0.36
DDB1-215ENST00000539712 GFPT2O94808 682 aa17.29■□□□□ 0.36
DDB1-215ENST00000539712 CYP1A1P04798 512 aaPredicted RBP17.29■□□□□ 0.36
DDB1-215ENST00000539712 PDGFRAP16234 1089 aa17.29■□□□□ 0.36
DDB1-215ENST00000539712 STK19P49842 368 aaPredicted RBP17.29■□□□□ 0.36
DDB1-215ENST00000539712 FMO1Q01740 532 aa17.29■□□□□ 0.36
DDB1-215ENST00000539712 BNC1Q01954 994 aa17.29■□□□□ 0.36
DDB1-215ENST00000539712 SLC12A1Q13621 1099 aa17.29■□□□□ 0.36
DDB1-215ENST00000539712 SLC25A52Q3SY17 297 aa17.29■□□□□ 0.36
DDB1-215ENST00000539712 TTC39BQ5VTQ0 682 aaPredicted RBP17.29■□□□□ 0.36
DDB1-215ENST00000539712 NAA35Q5VZE5 725 aa17.29■□□□□ 0.36
DDB1-215ENST00000539712 ZNF776Q68DI1 518 aaPredicted RBP17.29■□□□□ 0.36
DDB1-215ENST00000539712 DHX40Q8IX18 779 aaKnown RBP17.29■□□□□ 0.36
DDB1-215ENST00000539712 MINDY1Q8N5J2 469 aa17.29■□□□□ 0.36
DDB1-215ENST00000539712 PTPRN2Q92932 1015 aa17.29■□□□□ 0.36
DDB1-215ENST00000539712 TBCBQ99426 244 aa17.29■□□□□ 0.36
DDB1-215ENST00000539712 ORAI3Q9BRQ5 295 aa17.29■□□□□ 0.36
DDB1-215ENST00000539712 GTPBP2Q9BX10 602 aaKnown RBP17.29■□□□□ 0.36
DDB1-215ENST00000539712 PCED1AQ9H1Q7 454 aa17.29■□□□□ 0.36
DDB1-215ENST00000539712 PDCL3Q9H2J4 239 aa17.29■□□□□ 0.36
DDB1-215ENST00000539712 TMPRSS4Q9NRS4 437 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms