RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 HTR3CQ8WXA8 447 aa20.8■□□□□ 0.92
TMEM260-203ENST00000539559 CDKL2Q92772 493 aa20.8■□□□□ 0.92
TMEM260-203ENST00000539559 MARK4Q96L34 752 aa20.8■□□□□ 0.92
TMEM260-203ENST00000539559 CNBD2Q96M20 576 aa20.8■□□□□ 0.92
TMEM260-203ENST00000539559 AGAP3Q96P47 875 aa20.8■□□□□ 0.92
TMEM260-203ENST00000539559 SNX15Q9NRS6 342 aa20.8■□□□□ 0.92
TMEM260-203ENST00000539559 ARHGAP26Q9UNA1 814 aa20.8■□□□□ 0.92
TMEM260-203ENST00000539559 OTOFQ9HC10 1997 aa20.79■□□□□ 0.92
TMEM260-203ENST00000539559 PPEF2O14830 753 aa20.79■□□□□ 0.92
TMEM260-203ENST00000539559 LTFP02788 710 aa20.79■□□□□ 0.92
TMEM260-203ENST00000539559 CHRNGP07510 517 aa20.79■□□□□ 0.92
TMEM260-203ENST00000539559 CBLBQ13191 982 aa20.79■□□□□ 0.92
TMEM260-203ENST00000539559 MOB2Q70IA6 237 aa20.79■□□□□ 0.92
TMEM260-203ENST00000539559 DCLK2Q8N568 766 aa20.79■□□□□ 0.92
TMEM260-203ENST00000539559 ACVR1CQ8NER5 493 aa20.79■□□□□ 0.92
TMEM260-203ENST00000539559 JADE3Q92613 823 aa20.79■□□□□ 0.92
TMEM260-203ENST00000539559 FCRL3Q96P31 734 aaPredicted RBP20.79■□□□□ 0.92
TMEM260-203ENST00000539559 QKIQ96PU8 341 aaKnown RBP eCLIP20.79■□□□□ 0.924e-10■■■■■ 29.8
TMEM260-203ENST00000539559 AGAP2Q99490 1192 aa20.79■□□□□ 0.92
TMEM260-203ENST00000539559 NT5C1AQ9BXI3 368 aa20.79■□□□□ 0.92
TMEM260-203ENST00000539559 TXNDC16Q9P2K2 825 aa20.79■□□□□ 0.92
TMEM260-203ENST00000539559 SSX2IPQ9Y2D8 614 aa20.79■□□□□ 0.92
TMEM260-203ENST00000539559 STX16-NPEPL1H3BU86 382 aa20.79■□□□□ 0.92
TMEM260-203ENST00000539559 NOP56O00567 594 aaKnown RBP20.79■□□□□ 0.92
TMEM260-203ENST00000539559 ALDH1A2O94788 518 aa20.79■□□□□ 0.92
TMEM260-203ENST00000539559 IL18RAPO95256 599 aa20.79■□□□□ 0.92
TMEM260-203ENST00000539559 LCP1P13796 627 aa20.79■□□□□ 0.92
TMEM260-203ENST00000539559 DEUP1Q05D60 604 aa20.79■□□□□ 0.92
TMEM260-203ENST00000539559 LRRC23Q53EV4 343 aaPredicted RBP20.79■□□□□ 0.92
TMEM260-203ENST00000539559 STEAP4Q687X5 459 aa20.79■□□□□ 0.92
TMEM260-203ENST00000539559 IYDQ6PHW0 289 aa20.79■□□□□ 0.92
TMEM260-203ENST00000539559 METTL25Q8N6Q8 603 aa20.79■□□□□ 0.92
TMEM260-203ENST00000539559 DRAXINQ8NBI3 349 aaPredicted RBP20.79■□□□□ 0.92
TMEM260-203ENST00000539559 GRIP2Q9C0E4 1043 aa20.79■□□□□ 0.92
TMEM260-203ENST00000539559 C2orf40Q9H1Z8 148 aa20.79■□□□□ 0.92
TMEM260-203ENST00000539559 DDX18Q9NVP1 670 aaKnown RBP20.79■□□□□ 0.92
TMEM260-203ENST00000539559 SLC4A7Q9Y6M7 1214 aa20.79■□□□□ 0.92
TMEM260-203ENST00000539559 RPS6KL1Q9Y6S9 549 aa20.79■□□□□ 0.92
TMEM260-203ENST00000539559 CCDC78A2IDD5 438 aa20.78■□□□□ 0.92
TMEM260-203ENST00000539559 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.78■□□□□ 0.92
TMEM260-203ENST00000539559 SNAPC2Q13487 334 aa20.78■□□□□ 0.92
TMEM260-203ENST00000539559 SOWAHAQ2M3V2 549 aa20.78■□□□□ 0.92
TMEM260-203ENST00000539559 FAM131BQ86XD5 332 aa20.78■□□□□ 0.92
TMEM260-203ENST00000539559 SNX32Q86XE0 403 aa20.78■□□□□ 0.92
TMEM260-203ENST00000539559 SIKE1Q9BRV8 207 aa20.78■□□□□ 0.92
TMEM260-203ENST00000539559 COPS7BQ9H9Q2 264 aaPredicted RBP20.78■□□□□ 0.92
TMEM260-203ENST00000539559 GOLGA8TH3BQL2 631 aa20.78■□□□□ 0.92
TMEM260-203ENST00000539559 MDM4O15151 490 aa20.78■□□□□ 0.92
TMEM260-203ENST00000539559 MFSD11O43934 449 aa20.78■□□□□ 0.92
TMEM260-203ENST00000539559 MPSTP25325 297 aa20.78■□□□□ 0.92
TMEM260-203ENST00000539559 CNTFP26441 200 aa20.78■□□□□ 0.92
TMEM260-203ENST00000539559 HARS2P49590 506 aaKnown RBP20.78■□□□□ 0.92
TMEM260-203ENST00000539559 TBC1D25Q3MII6 688 aa20.78■□□□□ 0.92
TMEM260-203ENST00000539559 METTL7BQ6UX53 244 aa20.78■□□□□ 0.92
TMEM260-203ENST00000539559 PQLC1Q8N2U9 271 aa20.78■□□□□ 0.92
TMEM260-203ENST00000539559 GALNT4Q8N4A0 578 aa20.78■□□□□ 0.92
TMEM260-203ENST00000539559 TNFSF13BQ9Y275 285 aa20.78■□□□□ 0.92
TMEM260-203ENST00000539559 A0A087WZ62 844 aa20.77■□□□□ 0.92
TMEM260-203ENST00000539559 A0A1B0GTW7 788 aa20.77■□□□□ 0.92
TMEM260-203ENST00000539559 RNF103O00237 685 aa20.77■□□□□ 0.92
TMEM260-203ENST00000539559 DNAJA2O60884 412 aa20.77■□□□□ 0.92
TMEM260-203ENST00000539559 TFAP2AP05549 437 aa20.77■□□□□ 0.92
TMEM260-203ENST00000539559 PGK2P07205 417 aa20.77■□□□□ 0.92
TMEM260-203ENST00000539559 XRCC1P18887 633 aaPredicted RBP20.77■□□□□ 0.92
TMEM260-203ENST00000539559 GRK2P25098 689 aa20.77■□□□□ 0.92
TMEM260-203ENST00000539559 EPHA3P29320 983 aa20.77■□□□□ 0.92
TMEM260-203ENST00000539559 THOP1P52888 689 aa20.77■□□□□ 0.92
TMEM260-203ENST00000539559 TMEM132DQ14C87 1099 aa20.77■□□□□ 0.92
TMEM260-203ENST00000539559 OGFRL1Q5TC84 451 aaPredicted RBP20.77■□□□□ 0.92
TMEM260-203ENST00000539559 TMEM198Q66K66 360 aa20.77■□□□□ 0.92
TMEM260-203ENST00000539559 CCNYQ8ND76 341 aa20.77■□□□□ 0.92
TMEM260-203ENST00000539559 ACMSDQ8TDX5 336 aa20.77■□□□□ 0.92
TMEM260-203ENST00000539559 HIC2Q96JB3 615 aa20.77■□□□□ 0.92
TMEM260-203ENST00000539559 CDRT15Q96T59 188 aa20.77■□□□□ 0.92
TMEM260-203ENST00000539559 GPR20Q99678 358 aa20.77■□□□□ 0.92
TMEM260-203ENST00000539559 FDXACB1Q9BRP7 624 aaPredicted RBP20.77■□□□□ 0.92
TMEM260-203ENST00000539559 CCDC28BQ9BUN5 200 aa20.77■□□□□ 0.92
TMEM260-203ENST00000539559 CDH19Q9H159 772 aa20.77■□□□□ 0.92
TMEM260-203ENST00000539559 DPEP3Q9H4B8 488 aa20.77■□□□□ 0.92
TMEM260-203ENST00000539559 STN1Q9H668 368 aaKnown RBP20.77■□□□□ 0.92
TMEM260-203ENST00000539559 A0A0A0MRY4 1105 aa20.77■□□□□ 0.92
TMEM260-203ENST00000539559 IGKV6-21A0A0C4DH24 114 aa20.77■□□□□ 0.92
TMEM260-203ENST00000539559 VILLO15195 856 aa20.77■□□□□ 0.92
TMEM260-203ENST00000539559 FBXO21O94952 628 aa20.77■□□□□ 0.92
TMEM260-203ENST00000539559 TCN1P20061 433 aaPredicted RBP20.77■□□□□ 0.92
TMEM260-203ENST00000539559 SAT1P21673 171 aa20.77■□□□□ 0.92
TMEM260-203ENST00000539559 PPIL2Q13356 520 aa20.77■□□□□ 0.92
TMEM260-203ENST00000539559 CNGA3Q16281 694 aa20.77■□□□□ 0.92
TMEM260-203ENST00000539559 EPGNQ6UW88 154 aa20.77■□□□□ 0.92
TMEM260-203ENST00000539559 TDRD5Q8NAT2 981 aaKnown RBP20.77■□□□□ 0.92
TMEM260-203ENST00000539559 PIP4K2CQ8TBX8 421 aa20.77■□□□□ 0.92
TMEM260-203ENST00000539559 SPATA13Q96N96 652 aa20.77■□□□□ 0.92
TMEM260-203ENST00000539559 CYP3A43Q9HB55 503 aa20.77■□□□□ 0.92
TMEM260-203ENST00000539559 KCNH4Q9UQ05 1017 aa20.77■□□□□ 0.92
TMEM260-203ENST00000539559 LZTS1Q9Y250 596 aa20.77■□□□□ 0.92
TMEM260-203ENST00000539559 SNX9Q9Y5X1 595 aa20.77■□□□□ 0.92
TMEM260-203ENST00000539559 LOC285556D6RIA3 1793 aa20.76■□□□□ 0.91
TMEM260-203ENST00000539559 BPTFQ12830 3046 aa20.76■□□□□ 0.91
TMEM260-203ENST00000539559 DPYSL4O14531 572 aa20.76■□□□□ 0.91
TMEM260-203ENST00000539559 Q3C1V9 767 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms