RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 TYW5A2RUC4 315 aaKnown RBP16.22■□□□□ 0.19
RPAIN-206ENST00000539417 TCAF2A6NFQ2 919 aa16.22■□□□□ 0.19
RPAIN-206ENST00000539417 SOWAHDA6NJG2 315 aa16.22■□□□□ 0.19
RPAIN-206ENST00000539417 ATG13O75143 517 aa16.22■□□□□ 0.19
RPAIN-206ENST00000539417 LRCH4O75427 683 aa16.22■□□□□ 0.19
RPAIN-206ENST00000539417 LRIG2O94898 1065 aa16.22■□□□□ 0.19
RPAIN-206ENST00000539417 H2AFZP0C0S5 128 aa16.22■□□□□ 0.19
RPAIN-206ENST00000539417 FECHP22830 423 aa16.22■□□□□ 0.19
RPAIN-206ENST00000539417 PRKCHP24723 683 aa16.22■□□□□ 0.19
RPAIN-206ENST00000539417 MIPP30301 263 aa16.22■□□□□ 0.19
RPAIN-206ENST00000539417 CDC25BP30305 580 aa16.22■□□□□ 0.19
RPAIN-206ENST00000539417 NTSR1P30989 418 aa16.22■□□□□ 0.19
RPAIN-206ENST00000539417 SCAPQ12770 1279 aa16.22■□□□□ 0.19
RPAIN-206ENST00000539417 SRSF5Q13243 272 aaKnown RBP16.22■□□□□ 0.19
RPAIN-206ENST00000539417 ZNF234Q14588 700 aa16.22■□□□□ 0.19
RPAIN-206ENST00000539417 PREPLQ4J6C6 727 aaPredicted RBP16.22■□□□□ 0.19
RPAIN-206ENST00000539417 PITRM1Q5JRX3 1037 aa16.22■□□□□ 0.19
RPAIN-206ENST00000539417 TXNRD3NBQ6F5E7 133 aa16.22■□□□□ 0.19
RPAIN-206ENST00000539417 H2AFVQ71UI9 128 aa16.22■□□□□ 0.19
RPAIN-206ENST00000539417 SLFN11Q7Z7L1 901 aa16.22■□□□□ 0.19
RPAIN-206ENST00000539417 CHPFQ8IZ52 775 aa16.22■□□□□ 0.19
RPAIN-206ENST00000539417 ZNF366Q8N895 744 aa16.22■□□□□ 0.19
RPAIN-206ENST00000539417 ATOH1Q92858 354 aaPredicted RBP16.22■□□□□ 0.19
RPAIN-206ENST00000539417 MYO19Q96H55 970 aa16.22■□□□□ 0.19
RPAIN-206ENST00000539417 OSBPL2Q9H1P3 480 aa16.22■□□□□ 0.19
RPAIN-206ENST00000539417 SLC6A17Q9H1V8 727 aa16.22■□□□□ 0.19
RPAIN-206ENST00000539417 MTG2Q9H4K7 406 aa16.22■□□□□ 0.19
RPAIN-206ENST00000539417 MRPL47Q9HD33 250 aaKnown RBP16.22■□□□□ 0.19
RPAIN-206ENST00000539417 ANAPC7Q9UJX3 599 aa16.22■□□□□ 0.19
RPAIN-206ENST00000539417 SLC8A2Q9UPR5 921 aa16.22■□□□□ 0.19
RPAIN-206ENST00000539417 OR51B4Q9Y5P0 310 aa16.22■□□□□ 0.19
RPAIN-206ENST00000539417 STON1Q9Y6Q2 735 aa16.22■□□□□ 0.19
RPAIN-206ENST00000539417 CACNA1HO95180 2353 aa16.22■□□□□ 0.19
RPAIN-206ENST00000539417 EML5Q05BV3 1969 aa16.22■□□□□ 0.19
RPAIN-206ENST00000539417 HLA-EP13747 358 aa16.22■□□□□ 0.19
RPAIN-206ENST00000539417 IL1R2P27930 398 aa16.22■□□□□ 0.19
RPAIN-206ENST00000539417 TTC39BQ5VTQ0 682 aaPredicted RBP16.22■□□□□ 0.19
RPAIN-206ENST00000539417 RAD9BQ6WBX8 426 aa16.22■□□□□ 0.19
RPAIN-206ENST00000539417 TMEM139Q8IV31 216 aa16.22■□□□□ 0.19
RPAIN-206ENST00000539417 AHI1Q8N157 1196 aa16.22■□□□□ 0.19
RPAIN-206ENST00000539417 ZNF564Q8TBZ8 553 aaPredicted RBP16.22■□□□□ 0.19
RPAIN-206ENST00000539417 WFIKKN2Q8TEU8 576 aa16.22■□□□□ 0.19
RPAIN-206ENST00000539417 TTC17Q96AE7 1141 aa16.22■□□□□ 0.19
RPAIN-206ENST00000539417 ACDQ96AP0 544 aa16.22■□□□□ 0.19
RPAIN-206ENST00000539417 MRGPRX3Q96LB0 322 aa16.22■□□□□ 0.19
RPAIN-206ENST00000539417 PANX2Q96RD6 677 aa16.22■□□□□ 0.19
RPAIN-206ENST00000539417 GABRG3Q99928 467 aa16.22■□□□□ 0.19
RPAIN-206ENST00000539417 KIAA1522Q9P206 1035 aaPredicted RBP16.22■□□□□ 0.19
RPAIN-206ENST00000539417 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.21■□□□□ 0.19
RPAIN-206ENST00000539417 TMEM253P0C7T8 217 aa16.21■□□□□ 0.19
RPAIN-206ENST00000539417 HOXB2P14652 356 aa16.21■□□□□ 0.19
RPAIN-206ENST00000539417 CDH4P55283 916 aa16.21■□□□□ 0.19
RPAIN-206ENST00000539417 NRG1Q02297 640 aaPredicted RBP16.21■□□□□ 0.19
RPAIN-206ENST00000539417 SEMA3BQ13214 749 aa16.21■□□□□ 0.19
RPAIN-206ENST00000539417 MTA1Q13330 715 aa16.21■□□□□ 0.19
RPAIN-206ENST00000539417 ZNF177Q13360 481 aaPredicted RBP16.21■□□□□ 0.19
RPAIN-206ENST00000539417 ENPP2Q13822 863 aa16.21■□□□□ 0.19
RPAIN-206ENST00000539417 PLEKHG6Q3KR16 790 aa16.21■□□□□ 0.19
RPAIN-206ENST00000539417 ZNF528Q3MIS6 628 aa16.21■□□□□ 0.19
RPAIN-206ENST00000539417 ARL13BQ3SXY8 428 aa16.21■□□□□ 0.19
RPAIN-206ENST00000539417 RNF219Q5W0B1 726 aaPredicted RBP16.21■□□□□ 0.19
RPAIN-206ENST00000539417 NUDT18Q6ZVK8 323 aa16.21■□□□□ 0.19
RPAIN-206ENST00000539417 NLRP14Q86W24 1093 aa16.21■□□□□ 0.19
RPAIN-206ENST00000539417 KCNV2Q8TDN2 545 aa16.21■□□□□ 0.19
RPAIN-206ENST00000539417 SNRNP25Q9BV90 132 aaKnown RBP16.21■□□□□ 0.19
RPAIN-206ENST00000539417 TBC1D30Q9Y2I9 924 aa16.21■□□□□ 0.19
RPAIN-206ENST00000539417 FANCMQ8IYD8 2048 aa16.2■□□□□ 0.18
RPAIN-206ENST00000539417 A0A0D9SEW6 157 aa16.2■□□□□ 0.18
RPAIN-206ENST00000539417 CLDN11O75508 207 aa16.2■□□□□ 0.18
RPAIN-206ENST00000539417 STK19P49842 368 aaPredicted RBP16.2■□□□□ 0.18
RPAIN-206ENST00000539417 EIF4HQ15056 248 aaKnown RBP16.2■□□□□ 0.18
RPAIN-206ENST00000539417 EOGTQ5NDL2 527 aa16.2■□□□□ 0.18
RPAIN-206ENST00000539417 ANO7Q6IWH7 933 aa16.2■□□□□ 0.18
RPAIN-206ENST00000539417 RWDD4Q6NW29 188 aaKnown RBP16.2■□□□□ 0.18
RPAIN-206ENST00000539417 LRRC31Q6UY01 552 aa16.2■□□□□ 0.18
RPAIN-206ENST00000539417 ZBTB44Q8NCP5 570 aa16.2■□□□□ 0.18
RPAIN-206ENST00000539417 MDGA1Q8NFP4 955 aa16.2■□□□□ 0.18
RPAIN-206ENST00000539417 CCDC26Q8TAB7 109 aa16.2■□□□□ 0.18
RPAIN-206ENST00000539417 CTNNBL1Q8WYA6 563 aaPredicted RBP16.2■□□□□ 0.18
RPAIN-206ENST00000539417 RPL10LQ96L21 214 aaKnown RBP16.2■□□□□ 0.18
RPAIN-206ENST00000539417 KCTD15Q96SI1 283 aaPredicted RBP16.2■□□□□ 0.18
RPAIN-206ENST00000539417 PSMB7Q99436 277 aa16.2■□□□□ 0.18
RPAIN-206ENST00000539417 FEM1AQ9BSK4 669 aa16.2■□□□□ 0.18
RPAIN-206ENST00000539417 TPSD1Q9BZJ3 242 aa16.2■□□□□ 0.18
RPAIN-206ENST00000539417 ZYG11BQ9C0D3 744 aa16.2■□□□□ 0.18
RPAIN-206ENST00000539417 TMEM245Q9H330 911 aa16.2■□□□□ 0.18
RPAIN-206ENST00000539417 TMEM51Q9NW97 253 aa16.2■□□□□ 0.18
RPAIN-206ENST00000539417 CTTNBP2NLQ9P2B4 639 aa16.2■□□□□ 0.18
RPAIN-206ENST00000539417 PPARGC1AQ9UBK2 798 aaKnown RBP16.2■□□□□ 0.18
RPAIN-206ENST00000539417 SLCO3A1Q9UIG8 710 aa16.2■□□□□ 0.18
RPAIN-206ENST00000539417 AP4E1Q9UPM8 1137 aa16.2■□□□□ 0.18
RPAIN-206ENST00000539417 REXO2Q9Y3B8 237 aaKnown RBP16.2■□□□□ 0.18
RPAIN-206ENST00000539417 WDR87Q6ZQQ6 2873 aa16.2■□□□□ 0.18
RPAIN-206ENST00000539417 TCRBV21S2A2A0A5A6 115 aa16.19■□□□□ 0.18
RPAIN-206ENST00000539417 RCCD1A6NED2 376 aa16.19■□□□□ 0.18
RPAIN-206ENST00000539417 HRO43593 1189 aa16.19■□□□□ 0.18
RPAIN-206ENST00000539417 LCA5LO95447 670 aa16.19■□□□□ 0.18
RPAIN-206ENST00000539417 POLR2EP19388 210 aaKnown RBP16.19■□□□□ 0.18
RPAIN-206ENST00000539417 GLDCP23378 1020 aa16.19■□□□□ 0.18
RPAIN-206ENST00000539417 L1CAMP32004 1257 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 267.9 ms