RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 SLC6A3Q01959 620 aa22.93■■□□□ 1.26
SCARB1-206ENST00000539320 KCNMA1Q12791 1236 aa22.93■■□□□ 1.26
SCARB1-206ENST00000539320 ARID5BQ14865 1188 aa22.93■■□□□ 1.26
SCARB1-206ENST00000539320 KLHDC7AQ5VTJ3 777 aa22.93■■□□□ 1.26
SCARB1-206ENST00000539320 RNF219Q5W0B1 726 aaPredicted RBP22.93■■□□□ 1.26
SCARB1-206ENST00000539320 DHX40Q8IX18 779 aaKnown RBP22.93■■□□□ 1.26
SCARB1-206ENST00000539320 PDCL3Q9H2J4 239 aa22.93■■□□□ 1.26
SCARB1-206ENST00000539320 LMBRD1Q9NUN5 540 aa22.93■■□□□ 1.26
SCARB1-206ENST00000539320 NME3Q13232 169 aa22.92■■□□□ 1.26
SCARB1-206ENST00000539320 MTA1Q13330 715 aa22.92■■□□□ 1.26
SCARB1-206ENST00000539320 TCP11X2Q5H9J9 407 aa22.92■■□□□ 1.26
SCARB1-206ENST00000539320 ZDHHC17Q8IUH5 632 aa22.92■■□□□ 1.26
SCARB1-206ENST00000539320 APCDD1Q8J025 514 aa22.92■■□□□ 1.26
SCARB1-206ENST00000539320 CCAR2Q8N163 923 aaKnown RBP22.92■■□□□ 1.26
SCARB1-206ENST00000539320 TMEM35BQ8NCS4 154 aa22.92■■□□□ 1.26
SCARB1-206ENST00000539320 PABPC3Q9H361 631 aaKnown RBP22.92■■□□□ 1.26
SCARB1-206ENST00000539320 SGK2Q9HBY8 427 aa22.92■■□□□ 1.26
SCARB1-206ENST00000539320 TAB2Q9NYJ8 693 aa22.92■■□□□ 1.26
SCARB1-206ENST00000539320 ZBTB32Q9Y2Y4 487 aaPredicted RBP22.92■■□□□ 1.26
SCARB1-206ENST00000539320 EDDM13A0A1B0GTR0 161 aa22.91■■□□□ 1.26
SCARB1-206ENST00000539320 RNASEH1O60930 286 aaKnown RBP22.91■■□□□ 1.26
SCARB1-206ENST00000539320 CD59P13987 128 aa22.91■■□□□ 1.26
SCARB1-206ENST00000539320 UCHL3P15374 230 aa22.91■■□□□ 1.26
SCARB1-206ENST00000539320 CYP11B1P15538 503 aa22.91■■□□□ 1.26
SCARB1-206ENST00000539320 PDGFRAP16234 1089 aa22.91■■□□□ 1.26
SCARB1-206ENST00000539320 CDH5P33151 784 aaPredicted RBP22.91■■□□□ 1.26
SCARB1-206ENST00000539320 NOS2P35228 1153 aa22.91■■□□□ 1.26
SCARB1-206ENST00000539320 ECT2LQ008S8 904 aa22.91■■□□□ 1.26
SCARB1-206ENST00000539320 SLC14A1Q13336 389 aa22.91■■□□□ 1.26
SCARB1-206ENST00000539320 SLC12A1Q13621 1099 aa22.91■■□□□ 1.26
SCARB1-206ENST00000539320 OTUD1Q5VV17 481 aaPredicted RBP22.91■■□□□ 1.26
SCARB1-206ENST00000539320 FBXL22Q6P050 247 aa22.91■■□□□ 1.26
SCARB1-206ENST00000539320 RPRD1AQ96P16 312 aaPredicted RBP22.91■■□□□ 1.26
SCARB1-206ENST00000539320 NAA15Q9BXJ9 866 aaKnown RBP22.91■■□□□ 1.26
SCARB1-206ENST00000539320 RRN3Q9NYV6 651 aa22.91■■□□□ 1.26
SCARB1-206ENST00000539320 SCML1Q9UN30 329 aa22.91■■□□□ 1.26
SCARB1-206ENST00000539320 SPAARA0A1B0GVQ0 90 aa22.9■■□□□ 1.26
SCARB1-206ENST00000539320 TARSL2A2RTX5 802 aaKnown RBP22.9■■□□□ 1.26
SCARB1-206ENST00000539320 TTC34A8MYJ7 566 aa22.9■■□□□ 1.26
SCARB1-206ENST00000539320 M0QYT0 321 aa22.9■■□□□ 1.26
SCARB1-206ENST00000539320 MATKP42679 507 aa22.9■■□□□ 1.26
SCARB1-206ENST00000539320 OXCT1P55809 520 aa22.9■■□□□ 1.26
SCARB1-206ENST00000539320 SIM1P81133 766 aaPredicted RBP22.9■■□□□ 1.26
SCARB1-206ENST00000539320 CENPCQ03188 943 aa22.9■■□□□ 1.26
SCARB1-206ENST00000539320 ST3GAL2Q16842 350 aa22.9■■□□□ 1.26
SCARB1-206ENST00000539320 C9orf64Q5T6V5 341 aa22.9■■□□□ 1.26
SCARB1-206ENST00000539320 TAF3Q5VWG9 929 aa22.9■■□□□ 1.26
SCARB1-206ENST00000539320 CXorf57Q6NSI4 855 aaKnown RBP22.9■■□□□ 1.26
SCARB1-206ENST00000539320 USP30Q70CQ3 517 aa22.9■■□□□ 1.26
SCARB1-206ENST00000539320 C1orf216Q8TAB5 229 aa22.9■■□□□ 1.26
SCARB1-206ENST00000539320 GANCQ8TET4 914 aa22.9■■□□□ 1.26
SCARB1-206ENST00000539320 STAP1Q9ULZ2 295 aa22.9■■□□□ 1.26
SCARB1-206ENST00000539320 NCKAP1Q9Y2A7 1128 aa22.9■■□□□ 1.26
SCARB1-206ENST00000539320 USP24Q9UPU5 2620 aa22.9■■□□□ 1.26
SCARB1-206ENST00000539320 NYNRINQ9P2P1 1898 aaKnown RBP22.9■■□□□ 1.26
SCARB1-206ENST00000539320 CABIN1Q9Y6J0 2220 aa22.89■■□□□ 1.26
SCARB1-206ENST00000539320 F8VZ95 297 aa22.89■■□□□ 1.25
SCARB1-206ENST00000539320 CER1O95813 267 aa22.89■■□□□ 1.25
SCARB1-206ENST00000539320 SCNN1AP37088 669 aa22.89■■□□□ 1.25
SCARB1-206ENST00000539320 GGCXP38435 758 aa22.89■■□□□ 1.25
SCARB1-206ENST00000539320 STK19P49842 368 aaPredicted RBP22.89■■□□□ 1.25
SCARB1-206ENST00000539320 SULT2A1Q06520 285 aa22.89■■□□□ 1.25
SCARB1-206ENST00000539320 SFSWAPQ12872 951 aaKnown RBP22.89■■□□□ 1.25
SCARB1-206ENST00000539320 AUHQ13825 339 aaKnown RBP22.89■■□□□ 1.25
SCARB1-206ENST00000539320 HNRNPDQ14103 355 aaKnown RBP22.89■■□□□ 1.25
SCARB1-206ENST00000539320 CST6Q15828 149 aa22.89■■□□□ 1.25
SCARB1-206ENST00000539320 ENOX1Q8TC92 643 aaKnown RBP22.89■■□□□ 1.25
SCARB1-206ENST00000539320 IGSF8Q969P0 613 aa22.89■■□□□ 1.25
SCARB1-206ENST00000539320 RPL10LQ96L21 214 aaKnown RBP22.89■■□□□ 1.25
SCARB1-206ENST00000539320 FBXL12Q9NXK8 326 aa22.89■■□□□ 1.25
SCARB1-206ENST00000539320 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.89■■□□□ 1.25
SCARB1-206ENST00000539320 SLCO3A1Q9UIG8 710 aa22.89■■□□□ 1.25
SCARB1-206ENST00000539320 VANGL2Q9ULK5 521 aa22.89■■□□□ 1.25
SCARB1-206ENST00000539320 WASF3Q9UPY6 502 aa22.89■■□□□ 1.25
SCARB1-206ENST00000539320 HS3ST4Q9Y661 456 aa22.89■■□□□ 1.25
SCARB1-206ENST00000539320 MID1O15344 667 aa22.88■■□□□ 1.25
SCARB1-206ENST00000539320 PAGE1O75459 146 aa22.88■■□□□ 1.25
SCARB1-206ENST00000539320 FSBPO95073 299 aa22.88■■□□□ 1.25
SCARB1-206ENST00000539320 LSM8O95777 96 aaKnown RBP22.88■■□□□ 1.25
SCARB1-206ENST00000539320 MZF1P28698 734 aaPredicted RBP22.88■■□□□ 1.25
SCARB1-206ENST00000539320 GABRB2P47870 512 aa22.88■■□□□ 1.25
SCARB1-206ENST00000539320 NUMBP49757 651 aa22.88■■□□□ 1.25
SCARB1-206ENST00000539320 SULT1E1P49888 294 aa22.88■■□□□ 1.25
SCARB1-206ENST00000539320 IRAK1P51617 712 aa22.88■■□□□ 1.25
SCARB1-206ENST00000539320 BNC1Q01954 994 aa22.88■■□□□ 1.25
SCARB1-206ENST00000539320 FAM102AQ5T9C2 384 aaPredicted RBP22.88■■□□□ 1.25
SCARB1-206ENST00000539320 IL27RAQ6UWB1 636 aa22.88■■□□□ 1.25
SCARB1-206ENST00000539320 MMAAQ8IVH4 418 aaKnown RBP22.88■■□□□ 1.25
SCARB1-206ENST00000539320 GBP4Q96PP9 640 aa22.88■■□□□ 1.25
SCARB1-206ENST00000539320 NPY6RQ99463 290 aa22.88■■□□□ 1.25
SCARB1-206ENST00000539320 PIGVQ9NUD9 493 aa22.88■■□□□ 1.25
SCARB1-206ENST00000539320 SERGEFQ9UGK8 458 aa22.88■■□□□ 1.25
SCARB1-206ENST00000539320 SLCO1B1Q9Y6L6 691 aa22.88■■□□□ 1.25
SCARB1-206ENST00000539320 A0A1W2PP55 124 aa22.87■■□□□ 1.25
SCARB1-206ENST00000539320 SH3BP5O60239 455 aa22.87■■□□□ 1.25
SCARB1-206ENST00000539320 NNMTP40261 264 aa22.87■■□□□ 1.25
SCARB1-206ENST00000539320 PSMD8P48556 350 aa22.87■■□□□ 1.25
SCARB1-206ENST00000539320 AFF3P51826 1226 aaKnown RBP22.87■■□□□ 1.25
SCARB1-206ENST00000539320 PLK1P53350 603 aa22.87■■□□□ 1.25
SCARB1-206ENST00000539320 BRMS1LQ5PSV4 323 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms