RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 CCDC117Q8IWD4 279 aaPredicted RBP12.95□□□□□ -0.34
VAMP1-206ENST00000538970 DHX40Q8IX18 779 aaKnown RBP12.95□□□□□ -0.34
VAMP1-206ENST00000538970 ZNF606Q8WXB4 792 aa12.95□□□□□ -0.34
VAMP1-206ENST00000538970 SRRTQ9BXP5 876 aaKnown RBP12.95□□□□□ -0.34
VAMP1-206ENST00000538970 POPDC2Q9HBU9 364 aa12.95□□□□□ -0.34
VAMP1-206ENST00000538970 UBE2TQ9NPD8 197 aaPredicted RBP12.95□□□□□ -0.34
VAMP1-206ENST00000538970 ACP6Q9NPH0 428 aa12.95□□□□□ -0.34
VAMP1-206ENST00000538970 TOR4AQ9NXH8 423 aa12.95□□□□□ -0.34
VAMP1-206ENST00000538970 SERGEFQ9UGK8 458 aa12.95□□□□□ -0.34
VAMP1-206ENST00000538970 ERVW-1Q9UQF0 538 aa12.95□□□□□ -0.34
VAMP1-206ENST00000538970 ANKRD6Q9Y2G4 727 aa12.95□□□□□ -0.34
VAMP1-206ENST00000538970 GTF3C3Q9Y5Q9 886 aa12.95□□□□□ -0.34
VAMP1-206ENST00000538970 HELZ2Q9BYK8 2649 aaKnown RBP12.94□□□□□ -0.34
VAMP1-206ENST00000538970 TTC34A8MYJ7 566 aa12.94□□□□□ -0.34
VAMP1-206ENST00000538970 MID1O15344 667 aa12.94□□□□□ -0.34
VAMP1-206ENST00000538970 THAP12O43422 761 aa12.94□□□□□ -0.34
VAMP1-206ENST00000538970 RNASEH1O60930 286 aaKnown RBP12.94□□□□□ -0.34
VAMP1-206ENST00000538970 GADD45BO75293 160 aaPredicted RBP12.94□□□□□ -0.34
VAMP1-206ENST00000538970 DKK1O94907 266 aa12.94□□□□□ -0.34
VAMP1-206ENST00000538970 TRUB2O95900 331 aaKnown RBP12.94□□□□□ -0.34
VAMP1-206ENST00000538970 SRPRAP08240 638 aaKnown RBP12.94□□□□□ -0.34
VAMP1-206ENST00000538970 TACR2P21452 398 aa12.94□□□□□ -0.34
VAMP1-206ENST00000538970 GNA15P30679 374 aa12.94□□□□□ -0.34
VAMP1-206ENST00000538970 CTSKP43235 329 aa12.94□□□□□ -0.34
VAMP1-206ENST00000538970 YWHAZP63104 245 aaKnown RBP12.94□□□□□ -0.34
VAMP1-206ENST00000538970 PITX1P78337 314 aaPredicted RBP12.94□□□□□ -0.34
VAMP1-206ENST00000538970 SCAPQ12770 1279 aa12.94□□□□□ -0.34
VAMP1-206ENST00000538970 PDCLQ13371 301 aa12.94□□□□□ -0.34
VAMP1-206ENST00000538970 EIF4EBP2Q13542 120 aaPredicted RBP12.94□□□□□ -0.34
VAMP1-206ENST00000538970 CST6Q15828 149 aa12.94□□□□□ -0.34
VAMP1-206ENST00000538970 ZC3H12AQ5D1E8 599 aaKnown RBP12.94□□□□□ -0.34
VAMP1-206ENST00000538970 C9orf64Q5T6V5 341 aa12.94□□□□□ -0.34
VAMP1-206ENST00000538970 KIAA0895LQ68EN5 471 aa12.94□□□□□ -0.34
VAMP1-206ENST00000538970 TRIM65Q6PJ69 517 aa12.94□□□□□ -0.34
VAMP1-206ENST00000538970 CCNI2Q6ZMN8 369 aaPredicted RBP12.94□□□□□ -0.34
VAMP1-206ENST00000538970 ENOSF1Q7L5Y1 443 aa12.94□□□□□ -0.34
VAMP1-206ENST00000538970 LGI2Q8N0V4 545 aa12.94□□□□□ -0.34
VAMP1-206ENST00000538970 HNRNPLLQ8WVV9 542 aaKnown RBP12.94□□□□□ -0.34
VAMP1-206ENST00000538970 IGSF8Q969P0 613 aa12.94□□□□□ -0.34
VAMP1-206ENST00000538970 BTN2A3PQ96KV6 586 aa12.94□□□□□ -0.34
VAMP1-206ENST00000538970 FBXL12Q9NXK8 326 aa12.94□□□□□ -0.34
VAMP1-206ENST00000538970 KIAA1522Q9P206 1035 aaPredicted RBP12.94□□□□□ -0.34
VAMP1-206ENST00000538970 TJP2Q9UDY2 1190 aa12.94□□□□□ -0.34
VAMP1-206ENST00000538970 NCKAP1Q9Y2A7 1128 aa12.94□□□□□ -0.34
VAMP1-206ENST00000538970 BTBD3Q9Y2F9 522 aa12.94□□□□□ -0.34
VAMP1-206ENST00000538970 EDDM13A0A1B0GTR0 161 aa12.93□□□□□ -0.34
VAMP1-206ENST00000538970 A0A1W2PP55 124 aa12.93□□□□□ -0.34
VAMP1-206ENST00000538970 TARSL2A2RTX5 802 aaKnown RBP12.93□□□□□ -0.34
VAMP1-206ENST00000538970 BECN2A8MW95 431 aa12.93□□□□□ -0.34
VAMP1-206ENST00000538970 C10orf142B7Z368 130 aa12.93□□□□□ -0.34
VAMP1-206ENST00000538970 H0Y8X5 98 aa12.93□□□□□ -0.34
VAMP1-206ENST00000538970 MOCS3O95396 460 aa12.93□□□□□ -0.34
VAMP1-206ENST00000538970 PRB1P04280 392 aa12.93□□□□□ -0.34
VAMP1-206ENST00000538970 ATXN1LP0C7T5 689 aaKnown RBP12.93□□□□□ -0.34
VAMP1-206ENST00000538970 CCT8P50990 548 aa12.93□□□□□ -0.34
VAMP1-206ENST00000538970 ECT2LQ008S8 904 aa12.93□□□□□ -0.34
VAMP1-206ENST00000538970 SUZ12Q15022 739 aaKnown RBP12.93□□□□□ -0.34
VAMP1-206ENST00000538970 TAF5Q15542 800 aa12.93□□□□□ -0.34
VAMP1-206ENST00000538970 KCNT1Q5JUK3 1230 aa12.93□□□□□ -0.34
VAMP1-206ENST00000538970 GJB7Q6PEY0 223 aa12.93□□□□□ -0.34
VAMP1-206ENST00000538970 MMAAQ8IVH4 418 aaKnown RBP12.93□□□□□ -0.34
VAMP1-206ENST00000538970 APCDD1Q8J025 514 aa12.93□□□□□ -0.34
VAMP1-206ENST00000538970 RHBDD1Q8TEB9 315 aa12.93□□□□□ -0.34
VAMP1-206ENST00000538970 GANCQ8TET4 914 aa12.93□□□□□ -0.34
VAMP1-206ENST00000538970 MED15Q96RN5 788 aa12.93□□□□□ -0.34
VAMP1-206ENST00000538970 CDC6Q99741 560 aa12.93□□□□□ -0.34
VAMP1-206ENST00000538970 THAP9Q9H5L6 903 aa12.93□□□□□ -0.34
VAMP1-206ENST00000538970 ADAMTS1Q9UHI8 967 aa12.93□□□□□ -0.34
VAMP1-206ENST00000538970 SLCO3A1Q9UIG8 710 aa12.93□□□□□ -0.34
VAMP1-206ENST00000538970 FZD4Q9ULV1 537 aa12.93□□□□□ -0.34
VAMP1-206ENST00000538970 CEP83Q9Y592 693 aa12.93□□□□□ -0.34
VAMP1-206ENST00000538970 NUMA1Q14980 2115 aa12.92□□□□□ -0.34
VAMP1-206ENST00000538970 A0A1W2PPC4 97 aa12.92□□□□□ -0.34
VAMP1-206ENST00000538970 FAM47DPA6NHR8 397 aa12.92□□□□□ -0.34
VAMP1-206ENST00000538970 KCNU1A8MYU2 1149 aa12.92□□□□□ -0.34
VAMP1-206ENST00000538970 F5H5T6 163 aa12.92□□□□□ -0.34
VAMP1-206ENST00000538970 KCNK3O14649 394 aa12.92□□□□□ -0.34
VAMP1-206ENST00000538970 VILLO15195 856 aa12.92□□□□□ -0.34
VAMP1-206ENST00000538970 PCDHGA12O60330 932 aa12.92□□□□□ -0.34
VAMP1-206ENST00000538970 RNASEH2AO75792 299 aaKnown RBP12.92□□□□□ -0.34
VAMP1-206ENST00000538970 FGFR1OPO95684 399 aaKnown RBP12.92□□□□□ -0.34
VAMP1-206ENST00000538970 GRK6P43250 576 aa12.92□□□□□ -0.34
VAMP1-206ENST00000538970 PSMD8P48556 350 aa12.92□□□□□ -0.34
VAMP1-206ENST00000538970 STK19P49842 368 aaPredicted RBP12.92□□□□□ -0.34
VAMP1-206ENST00000538970 GALCP54803 685 aa12.92□□□□□ -0.34
VAMP1-206ENST00000538970 RACK1P63244 317 aaKnown RBP12.92□□□□□ -0.34
VAMP1-206ENST00000538970 SFSWAPQ12872 951 aaKnown RBP12.92□□□□□ -0.34
VAMP1-206ENST00000538970 RNF219Q5W0B1 726 aaPredicted RBP12.92□□□□□ -0.34
VAMP1-206ENST00000538970 NCEH1Q6PIU2 408 aa12.92□□□□□ -0.34
VAMP1-206ENST00000538970 ADAT2Q7Z6V5 191 aaKnown RBP12.92□□□□□ -0.34
VAMP1-206ENST00000538970 CIR1Q86X95 450 aaPredicted RBP12.92□□□□□ -0.34
VAMP1-206ENST00000538970 AADATQ8N5Z0 425 aa12.92□□□□□ -0.34
VAMP1-206ENST00000538970 ATP6V0D2Q8N8Y2 350 aa12.92□□□□□ -0.34
VAMP1-206ENST00000538970 LRIG1Q96JA1 1093 aa12.92□□□□□ -0.34
VAMP1-206ENST00000538970 FAM81BQ96LP2 452 aa12.92□□□□□ -0.34
VAMP1-206ENST00000538970 SLC6A18Q96N87 628 aa12.92□□□□□ -0.34
VAMP1-206ENST00000538970 SLC2A13Q96QE2 648 aa12.92□□□□□ -0.34
VAMP1-206ENST00000538970 FAM129BQ96TA1 746 aa12.92□□□□□ -0.34
VAMP1-206ENST00000538970 PRMT1Q99873 361 aaKnown RBP12.92□□□□□ -0.34
VAMP1-206ENST00000538970 CRACR2AQ9BSW2 395 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms