RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 MAGEA3P43357 314 aa11.04□□□□□ -0.64
CLIP1-210ENST00000538120 CXCR3P49682 368 aa11.04□□□□□ -0.64
CLIP1-210ENST00000538120 AIF1P55008 147 aa11.04□□□□□ -0.64
CLIP1-210ENST00000538120 NOMO2Q5JPE7 1267 aa11.04□□□□□ -0.64
CLIP1-210ENST00000538120 BSPRYQ5W0U4 402 aa11.04□□□□□ -0.64
CLIP1-210ENST00000538120 TRIM68Q6AZZ1 485 aa11.04□□□□□ -0.64
CLIP1-210ENST00000538120 ZNF449Q6P9G9 518 aa11.04□□□□□ -0.64
CLIP1-210ENST00000538120 C4orf22Q6V702 233 aa11.04□□□□□ -0.64
CLIP1-210ENST00000538120 PPP1R21Q6ZMI0 780 aa11.04□□□□□ -0.64
CLIP1-210ENST00000538120 THEM5Q8N1Q8 247 aa11.04□□□□□ -0.64
CLIP1-210ENST00000538120 MCUQ8NE86 351 aa11.04□□□□□ -0.64
CLIP1-210ENST00000538120 SCAMP5Q8TAC9 235 aa11.04□□□□□ -0.64
CLIP1-210ENST00000538120 MZB1Q8WU39 189 aa11.04□□□□□ -0.64
CLIP1-210ENST00000538120 DCAKDQ8WVC6 231 aa11.04□□□□□ -0.64
CLIP1-210ENST00000538120 COLEC11Q9BWP8 271 aa11.04□□□□□ -0.64
CLIP1-210ENST00000538120 PPCSQ9HAB8 311 aa11.04□□□□□ -0.64
CLIP1-210ENST00000538120 HMX1Q9NP08 348 aaPredicted RBP11.04□□□□□ -0.64
CLIP1-210ENST00000538120 BATF3Q9NR55 127 aa11.04□□□□□ -0.64
CLIP1-210ENST00000538120 DDIT4Q9NX09 232 aa11.04□□□□□ -0.64
CLIP1-210ENST00000538120 PHF24Q9UPV7 400 aa11.04□□□□□ -0.64
CLIP1-210ENST00000538120 SF3B1O75533 1304 aaKnown RBP eCLIP11.04□□□□□ -0.64
CLIP1-210ENST00000538120 TDRD15B5MCY1 1934 aaKnown RBP11.04□□□□□ -0.64
CLIP1-210ENST00000538120 A0A1W2PPM1 405 aa11.03□□□□□ -0.64
CLIP1-210ENST00000538120 TNFRSF10BO14763 440 aa11.03□□□□□ -0.64
CLIP1-210ENST00000538120 CBX6O95503 412 aa11.03□□□□□ -0.64
CLIP1-210ENST00000538120 GNRH1P01148 92 aa11.03□□□□□ -0.64
CLIP1-210ENST00000538120 APRTP07741 180 aa11.03□□□□□ -0.64
CLIP1-210ENST00000538120 OR4Q2P0C623 313 aa11.03□□□□□ -0.64
CLIP1-210ENST00000538120 TPSB2P20231 275 aa11.03□□□□□ -0.64
CLIP1-210ENST00000538120 GCKP35557 465 aa11.03□□□□□ -0.64
CLIP1-210ENST00000538120 PGFP49763 221 aa11.03□□□□□ -0.64
CLIP1-210ENST00000538120 CDK7P50613 346 aa11.03□□□□□ -0.64
CLIP1-210ENST00000538120 IL9RQ01113 521 aa11.03□□□□□ -0.64
CLIP1-210ENST00000538120 NR1H3Q13133 447 aa11.03□□□□□ -0.64
CLIP1-210ENST00000538120 EIF4EBP2Q13542 120 aaPredicted RBP11.03□□□□□ -0.64
CLIP1-210ENST00000538120 SEMA5AQ13591 1074 aa11.03□□□□□ -0.64
CLIP1-210ENST00000538120 TAF11Q15544 211 aa11.03□□□□□ -0.64
CLIP1-210ENST00000538120 TPSAB1Q15661 275 aa11.03□□□□□ -0.64
CLIP1-210ENST00000538120 TAC4Q86UU9 113 aa11.03□□□□□ -0.64
CLIP1-210ENST00000538120 SPNS2Q8IVW8 549 aa11.03□□□□□ -0.64
CLIP1-210ENST00000538120 DENND1AQ8TEH3 1009 aa11.03□□□□□ -0.64
CLIP1-210ENST00000538120 GIPC2Q8TF65 315 aa11.03□□□□□ -0.64
CLIP1-210ENST00000538120 FRMD8Q9BZ67 464 aaPredicted RBP11.03□□□□□ -0.64
CLIP1-210ENST00000538120 PNPLA8Q9NP80 782 aa11.03□□□□□ -0.64
CLIP1-210ENST00000538120 TBC1D13Q9NVG8 400 aa11.03□□□□□ -0.64
CLIP1-210ENST00000538120 RRN3Q9NYV6 651 aa11.03□□□□□ -0.64
CLIP1-210ENST00000538120 PSMC3IPQ9P2W1 217 aaPredicted RBP11.03□□□□□ -0.64
CLIP1-210ENST00000538120 DNAJB4Q9UDY4 337 aa11.03□□□□□ -0.64
CLIP1-210ENST00000538120 G3BP2Q9UN86 482 aaKnown RBP11.03□□□□□ -0.64
CLIP1-210ENST00000538120 TMA7Q9Y2S6 64 aaKnown RBP11.03□□□□□ -0.64
CLIP1-210ENST00000538120 NUMBLQ9Y6R0 609 aa11.03□□□□□ -0.64
CLIP1-210ENST00000538120 A0A0A0MRY4 1105 aa11.03□□□□□ -0.64
CLIP1-210ENST00000538120 TCRBV9S1A1TA0A576 114 aa11.03□□□□□ -0.64
CLIP1-210ENST00000538120 H0Y3Z8 333 aa11.03□□□□□ -0.64
CLIP1-210ENST00000538120 TMEM189-UBE2V1I3L0A0 370 aa11.03□□□□□ -0.64
CLIP1-210ENST00000538120 NBNO60934 754 aa11.03□□□□□ -0.64
CLIP1-210ENST00000538120 PEX11AO75192 247 aa11.03□□□□□ -0.64
CLIP1-210ENST00000538120 IGLV3-25P01717 112 aa11.03□□□□□ -0.64
CLIP1-210ENST00000538120 ERCC2P18074 760 aa11.03□□□□□ -0.64
CLIP1-210ENST00000538120 GNAZP19086 355 aa11.03□□□□□ -0.64
CLIP1-210ENST00000538120 RPA3P35244 121 aaPredicted RBP11.03□□□□□ -0.64
CLIP1-210ENST00000538120 GRIA1P42261 906 aa11.03□□□□□ -0.64
CLIP1-210ENST00000538120 SKIV2L2P42285 1042 aaKnown RBP11.03□□□□□ -0.64
CLIP1-210ENST00000538120 HCAR3P49019 387 aa11.03□□□□□ -0.64
CLIP1-210ENST00000538120 GLUD2P49448 558 aa11.03□□□□□ -0.64
CLIP1-210ENST00000538120 WASHC5Q12768 1159 aa11.03□□□□□ -0.64
CLIP1-210ENST00000538120 HEATR6Q6AI08 1181 aaKnown RBP11.03□□□□□ -0.64
CLIP1-210ENST00000538120 CAPRIN2Q6IMN6 1127 aaKnown RBP11.03□□□□□ -0.64
CLIP1-210ENST00000538120 VPS52Q8N1B4 723 aa11.03□□□□□ -0.64
CLIP1-210ENST00000538120 FAM13CQ8NE31 585 aa11.03□□□□□ -0.64
CLIP1-210ENST00000538120 SLC7A6OSQ96CW6 309 aaPredicted RBP11.03□□□□□ -0.64
CLIP1-210ENST00000538120 P2RY11Q96G91 374 aa11.03□□□□□ -0.64
CLIP1-210ENST00000538120 SPATA13Q96N96 652 aa11.03□□□□□ -0.64
CLIP1-210ENST00000538120 PAFAH2Q99487 392 aa11.03□□□□□ -0.64
CLIP1-210ENST00000538120 TMUB1Q9BVT8 246 aa11.03□□□□□ -0.64
CLIP1-210ENST00000538120 TRABDQ9H4I3 376 aa11.03□□□□□ -0.64
CLIP1-210ENST00000538120 PRDM12Q9H4Q4 367 aa11.03□□□□□ -0.64
CLIP1-210ENST00000538120 F9P00740 461 aa11.02□□□□□ -0.64
CLIP1-210ENST00000538120 EPHB2P29323 1055 aa11.02□□□□□ -0.64
CLIP1-210ENST00000538120 TSPY1Q01534 308 aa11.02□□□□□ -0.64
CLIP1-210ENST00000538120 YWHAHQ04917 246 aaPredicted RBP11.02□□□□□ -0.64
CLIP1-210ENST00000538120 CCDC15Q0P6D6 951 aa11.02□□□□□ -0.64
CLIP1-210ENST00000538120 MAPRE1Q15691 268 aaKnown RBP11.02□□□□□ -0.64
CLIP1-210ENST00000538120 SLC1A5Q15758 541 aa11.02□□□□□ -0.64
CLIP1-210ENST00000538120 TCTN1Q2MV58 587 aa11.02□□□□□ -0.64
CLIP1-210ENST00000538120 KLHL38Q2WGJ6 581 aa11.02□□□□□ -0.64
CLIP1-210ENST00000538120 PUS10Q3MIT2 529 aaKnown RBP11.02□□□□□ -0.64
CLIP1-210ENST00000538120 LRRC8DQ7L1W4 858 aa11.02□□□□□ -0.64
CLIP1-210ENST00000538120 PRPF39Q86UA1 669 aaKnown RBP11.02□□□□□ -0.64
CLIP1-210ENST00000538120 TTC8Q8TAM2 541 aa11.02□□□□□ -0.64
CLIP1-210ENST00000538120 DQX1Q8TE96 717 aaKnown RBP11.02□□□□□ -0.64
CLIP1-210ENST00000538120 NAF1Q96HR8 494 aaKnown RBP11.02□□□□□ -0.64
CLIP1-210ENST00000538120 SIGLEC10Q96LC7 697 aa11.02□□□□□ -0.64
CLIP1-210ENST00000538120 LRRC37BQ96QE4 947 aa11.02□□□□□ -0.64
CLIP1-210ENST00000538120 LBHD1Q9BQE6 289 aaPredicted RBP11.02□□□□□ -0.64
CLIP1-210ENST00000538120 ZCWPW1Q9H0M4 648 aa11.02□□□□□ -0.64
CLIP1-210ENST00000538120 LRMDAQ9H2I8 198 aa11.02□□□□□ -0.64
CLIP1-210ENST00000538120 TTLL3Q9Y4R7 772 aa11.02□□□□□ -0.64
CLIP1-210ENST00000538120 NLRC5Q86WI3 1866 aa11.02□□□□□ -0.65
CLIP1-210ENST00000538120 EME2A4GXA9 379 aaPredicted RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms