RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 PCDHAC1Q9H158 963 aa10.94□□□□□ -0.66
RTN3-208ENST00000537981 MKNK2Q9HBH9 465 aa10.94□□□□□ -0.66
RTN3-208ENST00000537981 SLC17A6Q9P2U8 582 aa10.94□□□□□ -0.66
RTN3-208ENST00000537981 ATP11BQ9Y2G3 1177 aa10.94□□□□□ -0.66
RTN3-208ENST00000537981 TNS2Q63HR2 1409 aa10.94□□□□□ -0.66
RTN3-208ENST00000537981 GOLGA8QA0A0J9YX86 632 aa10.94□□□□□ -0.66
RTN3-208ENST00000537981 HMX2A2RU54 273 aa10.94□□□□□ -0.66
RTN3-208ENST00000537981 GOLGA8OA6NCC3 632 aa10.94□□□□□ -0.66
RTN3-208ENST00000537981 GOLGA8NF8WBI6 632 aa10.94□□□□□ -0.66
RTN3-208ENST00000537981 ZNF195O14628 629 aa10.94□□□□□ -0.66
RTN3-208ENST00000537981 HTRA2O43464 458 aaPredicted RBP10.94□□□□□ -0.66
RTN3-208ENST00000537981 CSDE1O75534 798 aaKnown RBP10.94□□□□□ -0.66
RTN3-208ENST00000537981 CRYZL1O95825 349 aa10.94□□□□□ -0.66
RTN3-208ENST00000537981 WEE2P0C1S8 567 aa10.94□□□□□ -0.66
RTN3-208ENST00000537981 ATICP31939 592 aa10.94□□□□□ -0.66
RTN3-208ENST00000537981 RPS6P62753 249 aaKnown RBP10.94□□□□□ -0.66
RTN3-208ENST00000537981 BMT2Q1RMZ1 405 aa10.94□□□□□ -0.66
RTN3-208ENST00000537981 FAM47CQ5HY64 1035 aa10.94□□□□□ -0.66
RTN3-208ENST00000537981 CIAPIN1Q6FI81 312 aa10.94□□□□□ -0.66
RTN3-208ENST00000537981 HMBOX1Q6NT76 420 aa10.94□□□□□ -0.66
RTN3-208ENST00000537981 DNAJC10Q8IXB1 793 aa10.94□□□□□ -0.66
RTN3-208ENST00000537981 ESX1Q8N693 406 aa10.94□□□□□ -0.66
RTN3-208ENST00000537981 BEND7Q8N7W2 519 aaPredicted RBP10.94□□□□□ -0.66
RTN3-208ENST00000537981 PSD4Q8NDX1 1056 aa10.94□□□□□ -0.66
RTN3-208ENST00000537981 DDX1Q92499 740 aaKnown RBP10.94□□□□□ -0.66
RTN3-208ENST00000537981 CFAP36Q96G28 342 aa10.94□□□□□ -0.66
RTN3-208ENST00000537981 ZNF486Q96H40 463 aaPredicted RBP10.94□□□□□ -0.66
RTN3-208ENST00000537981 ACO2Q99798 780 aaKnown RBP10.94□□□□□ -0.66
RTN3-208ENST00000537981 CNGB3Q9NQW8 809 aa10.94□□□□□ -0.66
RTN3-208ENST00000537981 AGPAT3Q9NRZ7 376 aa10.94□□□□□ -0.66
RTN3-208ENST00000537981 ANKMY1Q9P2S6 941 aa10.94□□□□□ -0.66
RTN3-208ENST00000537981 GMPR2Q9P2T1 348 aaKnown RBP10.94□□□□□ -0.66
RTN3-208ENST00000537981 BOLA1Q9Y3E2 137 aa10.94□□□□□ -0.66
RTN3-208ENST00000537981 TTC34A8MYJ7 566 aa10.93□□□□□ -0.66
RTN3-208ENST00000537981 C1QAP02745 245 aa10.93□□□□□ -0.66
RTN3-208ENST00000537981 CAPNS1P04632 268 aa10.93□□□□□ -0.66
RTN3-208ENST00000537981 C8BP07358 591 aa10.93□□□□□ -0.66
RTN3-208ENST00000537981 BPGMP07738 259 aa10.93□□□□□ -0.66
RTN3-208ENST00000537981 MCF2P10911 925 aa10.93□□□□□ -0.66
RTN3-208ENST00000537981 GZMAP12544 262 aa10.93□□□□□ -0.66
RTN3-208ENST00000537981 TAL1P17542 331 aaPredicted RBP10.93□□□□□ -0.66
RTN3-208ENST00000537981 TGM1P22735 817 aa10.93□□□□□ -0.66
RTN3-208ENST00000537981 GNL1P36915 607 aaPredicted RBP10.93□□□□□ -0.66
RTN3-208ENST00000537981 HNRNPFP52597 415 aaKnown RBP10.93□□□□□ -0.66
RTN3-208ENST00000537981 ZNF135P52742 658 aaPredicted RBP10.93□□□□□ -0.66
RTN3-208ENST00000537981 EIF6P56537 245 aaKnown RBP10.93□□□□□ -0.66
RTN3-208ENST00000537981 ESRRGP62508 458 aa10.93□□□□□ -0.66
RTN3-208ENST00000537981 FPGSQ05932 587 aa10.93□□□□□ -0.66
RTN3-208ENST00000537981 KLHL38Q2WGJ6 581 aa10.93□□□□□ -0.66
RTN3-208ENST00000537981 FAM214AQ32MH5 1076 aa10.93□□□□□ -0.66
RTN3-208ENST00000537981 LRIT3Q3SXY7 679 aa10.93□□□□□ -0.66
RTN3-208ENST00000537981 SLC9B1Q4ZJI4 515 aa10.93□□□□□ -0.66
RTN3-208ENST00000537981 PIGGQ5H8A4 983 aa10.93□□□□□ -0.66
RTN3-208ENST00000537981 AGAP7PQ5VUJ5 663 aa10.93□□□□□ -0.66
RTN3-208ENST00000537981 BTBD8Q5XKL5 378 aa10.93□□□□□ -0.66
RTN3-208ENST00000537981 ATG16L1Q676U5 607 aa10.93□□□□□ -0.66
RTN3-208ENST00000537981 PPP4R4Q6NUP7 873 aa10.93□□□□□ -0.66
RTN3-208ENST00000537981 FAM71AQ8IYT1 594 aa10.93□□□□□ -0.66
RTN3-208ENST00000537981 ADGRF2Q8IZF7 708 aa10.93□□□□□ -0.66
RTN3-208ENST00000537981 TTC39CQ8N584 583 aa10.93□□□□□ -0.66
RTN3-208ENST00000537981 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.93□□□□□ -0.66
RTN3-208ENST00000537981 PIWIL2Q8TC59 973 aaKnown RBP10.93□□□□□ -0.66
RTN3-208ENST00000537981 POMGNT1Q8WZA1 660 aa10.93□□□□□ -0.66
RTN3-208ENST00000537981 SGCDQ92629 289 aa10.93□□□□□ -0.66
RTN3-208ENST00000537981 BHMTQ93088 406 aa10.93□□□□□ -0.66
RTN3-208ENST00000537981 SORT1Q99523 831 aa10.93□□□□□ -0.66
RTN3-208ENST00000537981 MTG1Q9BT17 334 aaPredicted RBP10.93□□□□□ -0.66
RTN3-208ENST00000537981 NOL11Q9H8H0 719 aaKnown RBP10.93□□□□□ -0.66
RTN3-208ENST00000537981 CYP26B1Q9NR63 512 aa10.93□□□□□ -0.66
RTN3-208ENST00000537981 NXF1Q9UBU9 619 aaKnown RBP10.93□□□□□ -0.66
RTN3-208ENST00000537981 KDM3AQ9Y4C1 1321 aa10.93□□□□□ -0.66
RTN3-208ENST00000537981 IQANK1A0A1B0GTG1 560 aa10.93□□□□□ -0.66
RTN3-208ENST00000537981 H3BRB1 525 aa10.93□□□□□ -0.66
RTN3-208ENST00000537981 KPNA4O00629 521 aaPredicted RBP10.93□□□□□ -0.66
RTN3-208ENST00000537981 DLGAP1O14490 977 aa10.93□□□□□ -0.66
RTN3-208ENST00000537981 KMOO15229 486 aa10.93□□□□□ -0.66
RTN3-208ENST00000537981 GH2P01242 217 aa10.93□□□□□ -0.66
RTN3-208ENST00000537981 NCAM1P13591 858 aa10.93□□□□□ -0.66
RTN3-208ENST00000537981 ENO3P13929 434 aaPredicted RBP10.93□□□□□ -0.66
RTN3-208ENST00000537981 TUBA4AP68366 448 aa10.93□□□□□ -0.66
RTN3-208ENST00000537981 SPIRE1Q08AE8 756 aa10.93□□□□□ -0.66
RTN3-208ENST00000537981 NFX1Q12986 1120 aaKnown RBP10.93□□□□□ -0.66
RTN3-208ENST00000537981 FASTKD1Q53R41 847 aaKnown RBP10.93□□□□□ -0.66
RTN3-208ENST00000537981 MROH9Q5TGP6 573 aa10.93□□□□□ -0.66
RTN3-208ENST00000537981 CYP4V2Q6ZWL3 525 aaPredicted RBP10.93□□□□□ -0.66
RTN3-208ENST00000537981 SNX32Q86XE0 403 aa10.93□□□□□ -0.66
RTN3-208ENST00000537981 DSELQ8IZU8 1212 aa10.93□□□□□ -0.66
RTN3-208ENST00000537981 MYCT1Q8N699 235 aa10.93□□□□□ -0.66
RTN3-208ENST00000537981 NAT8LQ8N9F0 302 aa10.93□□□□□ -0.66
RTN3-208ENST00000537981 PDCD6IPQ8WUM4 868 aaKnown RBP10.93□□□□□ -0.66
RTN3-208ENST00000537981 FBXL20Q96IG2 436 aa10.93□□□□□ -0.66
RTN3-208ENST00000537981 ASB16Q96NS5 453 aa10.93□□□□□ -0.66
RTN3-208ENST00000537981 OR52B2Q96RD2 323 aa10.93□□□□□ -0.66
RTN3-208ENST00000537981 KCNK16Q96T55 309 aa10.93□□□□□ -0.66
RTN3-208ENST00000537981 OLFM1Q99784 485 aa10.93□□□□□ -0.66
RTN3-208ENST00000537981 C17orf80Q9BSJ5 609 aa10.93□□□□□ -0.66
RTN3-208ENST00000537981 RNPEPQ9H4A4 650 aa10.93□□□□□ -0.66
RTN3-208ENST00000537981 PLAC1Q9HBJ0 212 aa10.93□□□□□ -0.66
RTN3-208ENST00000537981 SMOXQ9NWM0 555 aa10.93□□□□□ -0.66
RTN3-208ENST00000537981 UGT2A1Q9Y4X1 527 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms