RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 FAM136AQ96C01 138 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 TMEM121Q9BTD3 319 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 UGT2B28Q9BY64 529 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 CLN6Q9NWW5 311 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 PI4KBQ9UBF8 816 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 AGO2Q9UKV8 859 aaKnown RBP5.77□□□□□ -1.49
CSMD1-215ENST00000537824 IQCMA0A1B0GVH7 501 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 RBM47A0AV96 593 aaKnown RBP5.77□□□□□ -1.49
CSMD1-215ENST00000537824 HLA-DRAP01903 254 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 ATF6P18850 670 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 MTMR2Q13614 643 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 AUHQ13825 339 aaKnown RBP5.77□□□□□ -1.49
CSMD1-215ENST00000537824 FNBP1LQ5T0N5 605 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 MZT2AQ6P582 158 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 SLC26A11Q86WA9 606 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 MYLPFQ96A32 169 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 NUP50Q9UKX7 468 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 ABCB11O95342 1321 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 NCAPD2Q15021 1401 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 A0A0A6YYK5 440 aaPredicted RBP5.77□□□□□ -1.49
CSMD1-215ENST00000537824 POLRMTO00411 1230 aaKnown RBP5.77□□□□□ -1.49
CSMD1-215ENST00000537824 SOAT2O75908 522 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 CHRNGP07510 517 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 PHKA2P46019 1235 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 PTRHD1Q6GMV3 140 aaKnown RBP5.77□□□□□ -1.49
CSMD1-215ENST00000537824 SLC25A24Q6NUK1 477 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 C12orf56Q8IXR9 622 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 PCDH20Q8N6Y1 951 aaKnown RBP5.77□□□□□ -1.49
CSMD1-215ENST00000537824 NINJ2Q9NZG7 142 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 GMPPBQ9Y5P6 360 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 BCKDKO14874 412 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 IFNA16P05015 189 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 CAPGP40121 348 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 GSTM5P46439 218 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 RCAN1P53805 252 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 VBP1P61758 197 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 PTSQ03393 145 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 CASP12Q6UXS9 341 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 C11orf96Q7Z7L8 435 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 TRNT1Q96Q11 434 aaKnown RBP5.77□□□□□ -1.49
CSMD1-215ENST00000537824 PHF11Q9UIL8 331 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 ZC3H13Q5T200 1668 aaKnown RBP5.77□□□□□ -1.49
CSMD1-215ENST00000537824 I3L521 148 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 MMP14P50281 582 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 TFDP3Q5H9I0 405 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 GPAT2Q6NUI2 795 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 CATSPER4Q7RTX7 472 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 RASAL3Q86YV0 1011 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 ADHFE1Q8IWW8 467 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 ELMO1Q92556 727 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 TMEM47Q9BQJ4 181 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 NUP153P49790 1475 aaKnown RBP5.77□□□□□ -1.49
CSMD1-215ENST00000537824 ANKRD31Q8N7Z5 1873 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 C2orf71A6NGG8 1288 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 H3BN98 237 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 STX11O75558 287 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 PLK1P53350 603 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 CACNB2Q08289 660 aaPredicted RBP5.77□□□□□ -1.49
CSMD1-215ENST00000537824 EML3Q32P44 896 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 C4orf22Q6V702 233 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 SAMD3Q8N6K7 520 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 GSTCDQ8NEC7 633 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 TBCDQ9BTW9 1192 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 SLC25A23Q9BV35 468 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 NOL11Q9H8H0 719 aaKnown RBP5.77□□□□□ -1.49
CSMD1-215ENST00000537824 BARHL2Q9NY43 387 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 TNRQ92752 1358 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 XDHP47989 1333 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 ORC5O43913 435 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 EYA4O95677 639 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 AQP4P55087 323 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 PLET1Q6UQ28 207 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 KYAT3Q6YP21 454 aaKnown RBP5.77□□□□□ -1.49
CSMD1-215ENST00000537824 GADL1Q6ZQY3 521 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 TRPV1Q8NER1 839 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 PJA1Q8NG27 643 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 KCTD10Q9H3F6 313 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 GPRC5DQ9NZD1 345 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 VPS4AQ9UN37 437 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 SIK3Q9Y2K2 1263 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 A0A0U1RQJ8 604 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 USP17L10C9JJH3 530 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 J3QRK9 145 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 ZNF197O14709 1029 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 SERPINA1P01009 418 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 C6orf222P0C671 652 aaPredicted RBP5.77□□□□□ -1.49
CSMD1-215ENST00000537824 CNTFP26441 200 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 RCVRNP35243 200 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 MSX2P35548 267 aaPredicted RBP5.77□□□□□ -1.49
CSMD1-215ENST00000537824 CEBPGP53567 150 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 MGAT5Q09328 741 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 SQLEQ14534 574 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 DSTYKQ6XUX3 929 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 ZCCHC23Q6ZST2 131 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 DENND6BQ8NEG7 585 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 VPS37AQ8NEZ2 397 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 SPIRE2Q8WWL2 714 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 FBXL8Q96CD0 374 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 MND1Q9BWT6 205 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 RMND5AQ9H871 391 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms