RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 RPS24P62847 133 aaKnown RBP13.96□□□□□ -0.17
RPAIN-205ENST00000536255 OGDHQ02218 1023 aa13.96□□□□□ -0.17
RPAIN-205ENST00000536255 CDH18Q13634 790 aa13.96□□□□□ -0.17
RPAIN-205ENST00000536255 SIM2Q14190 667 aaPredicted RBP13.96□□□□□ -0.17
RPAIN-205ENST00000536255 EIF4HQ15056 248 aaKnown RBP13.96□□□□□ -0.17
RPAIN-205ENST00000536255 EFHC2Q5JST6 749 aa13.96□□□□□ -0.17
RPAIN-205ENST00000536255 ANO7Q6IWH7 933 aa13.96□□□□□ -0.17
RPAIN-205ENST00000536255 FBXL22Q6P050 247 aa13.96□□□□□ -0.17
RPAIN-205ENST00000536255 PRR23BQ6ZRT6 265 aa13.96□□□□□ -0.17
RPAIN-205ENST00000536255 SLFN11Q7Z7L1 901 aa13.96□□□□□ -0.17
RPAIN-205ENST00000536255 RASSF3Q86WH2 238 aa13.96□□□□□ -0.17
RPAIN-205ENST00000536255 MFN1Q8IWA4 741 aa13.96□□□□□ -0.17
RPAIN-205ENST00000536255 CHPFQ8IZ52 775 aa13.96□□□□□ -0.17
RPAIN-205ENST00000536255 TXLNBQ8N3L3 684 aa13.96□□□□□ -0.17
RPAIN-205ENST00000536255 GAB3Q8WWW8 586 aa13.96□□□□□ -0.17
RPAIN-205ENST00000536255 RUBCNQ92622 972 aa13.96□□□□□ -0.17
RPAIN-205ENST00000536255 ARHGEF26Q96DR7 871 aa13.96□□□□□ -0.17
RPAIN-205ENST00000536255 EIF3CQ99613 913 aaKnown RBP13.96□□□□□ -0.17
RPAIN-205ENST00000536255 PACSIN1Q9BY11 444 aa13.96□□□□□ -0.17
RPAIN-205ENST00000536255 OSBPL2Q9H1P3 480 aa13.96□□□□□ -0.17
RPAIN-205ENST00000536255 POLMQ9NP87 494 aaPredicted RBP13.96□□□□□ -0.17
RPAIN-205ENST00000536255 STIM2Q9P246 746 aa13.96□□□□□ -0.17
RPAIN-205ENST00000536255 RAB23Q9ULC3 237 aa13.96□□□□□ -0.17
RPAIN-205ENST00000536255 VANGL2Q9ULK5 521 aa13.96□□□□□ -0.17
RPAIN-205ENST00000536255 A0A1B0GVM2 712 aa13.95□□□□□ -0.18
RPAIN-205ENST00000536255 TCAF2A6NFQ2 919 aa13.95□□□□□ -0.18
RPAIN-205ENST00000536255 PRPSAP2O60256 369 aa13.95□□□□□ -0.18
RPAIN-205ENST00000536255 RPP40O75818 363 aaKnown RBP13.95□□□□□ -0.18
RPAIN-205ENST00000536255 ALDH1A2O94788 518 aa13.95□□□□□ -0.18
RPAIN-205ENST00000536255 HOXB2P14652 356 aa13.95□□□□□ -0.18
RPAIN-205ENST00000536255 HLA-FP30511 346 aa13.95□□□□□ -0.18
RPAIN-205ENST00000536255 PCK1P35558 622 aa13.95□□□□□ -0.18
RPAIN-205ENST00000536255 OXCT1P55809 520 aa13.95□□□□□ -0.18
RPAIN-205ENST00000536255 NRG1Q02297 640 aaPredicted RBP13.95□□□□□ -0.18
RPAIN-205ENST00000536255 SCAPQ12770 1279 aa13.95□□□□□ -0.18
RPAIN-205ENST00000536255 SDE2Q6IQ49 451 aa13.95□□□□□ -0.18
RPAIN-205ENST00000536255 CEP68Q76N32 757 aa13.95□□□□□ -0.18
RPAIN-205ENST00000536255 NIPA2Q8N8Q9 360 aa13.95□□□□□ -0.18
RPAIN-205ENST00000536255 CCDC112Q8NEF3 446 aa13.95□□□□□ -0.18
RPAIN-205ENST00000536255 MDGA1Q8NFP4 955 aa13.95□□□□□ -0.18
RPAIN-205ENST00000536255 WFIKKN2Q8TEU8 576 aa13.95□□□□□ -0.18
RPAIN-205ENST00000536255 RFFLQ8WZ73 363 aa13.95□□□□□ -0.18
RPAIN-205ENST00000536255 MYEOVQ96EZ4 313 aa13.95□□□□□ -0.18
RPAIN-205ENST00000536255 ACOX2Q99424 681 aa13.95□□□□□ -0.18
RPAIN-205ENST00000536255 GABRG3Q99928 467 aa13.95□□□□□ -0.18
RPAIN-205ENST00000536255 TRIM7Q9C029 511 aa13.95□□□□□ -0.18
RPAIN-205ENST00000536255 OR12D3Q9UGF7 316 aa13.95□□□□□ -0.18
RPAIN-205ENST00000536255 PCDHA13Q9Y5I0 950 aa13.95□□□□□ -0.18
RPAIN-205ENST00000536255 A0A1W2PQF6 199 aa13.94□□□□□ -0.18
RPAIN-205ENST00000536255 TCRBV21S2A2A0A5A6 115 aa13.94□□□□□ -0.18
RPAIN-205ENST00000536255 E9PAM4 449 aa13.94□□□□□ -0.18
RPAIN-205ENST00000536255 H0Y626 953 aa13.94□□□□□ -0.18
RPAIN-205ENST00000536255 NPC1O15118 1278 aa13.94□□□□□ -0.18
RPAIN-205ENST00000536255 TIMM44O43615 452 aa13.94□□□□□ -0.18
RPAIN-205ENST00000536255 CLDN11O75508 207 aa13.94□□□□□ -0.18
RPAIN-205ENST00000536255 LUC7L3O95232 432 aaKnown RBP13.94□□□□□ -0.18
RPAIN-205ENST00000536255 WASP42768 502 aa13.94□□□□□ -0.18
RPAIN-205ENST00000536255 CDH4P55283 916 aa13.94□□□□□ -0.18
RPAIN-205ENST00000536255 KRT83P78385 493 aa13.94□□□□□ -0.18
RPAIN-205ENST00000536255 ZNF252P-AS1Q0IIN9 211 aa13.94□□□□□ -0.18
RPAIN-205ENST00000536255 LPAL2Q16609 132 aa13.94□□□□□ -0.18
RPAIN-205ENST00000536255 C5orf22Q49AR2 442 aa13.94□□□□□ -0.18
RPAIN-205ENST00000536255 RAB6CQ53S08 254 aa13.94□□□□□ -0.18
RPAIN-205ENST00000536255 TMEM215Q68D42 235 aa13.94□□□□□ -0.18
RPAIN-205ENST00000536255 LAIR1Q6GTX8 287 aa13.94□□□□□ -0.18
RPAIN-205ENST00000536255 CHST9Q7L1S5 443 aa13.94□□□□□ -0.18
RPAIN-205ENST00000536255 PSTKQ8IV42 348 aaKnown RBP13.94□□□□□ -0.18
RPAIN-205ENST00000536255 CFAP52Q8N1V2 620 aa13.94□□□□□ -0.18
RPAIN-205ENST00000536255 CARNMT1Q8N4J0 409 aa13.94□□□□□ -0.18
RPAIN-205ENST00000536255 CCDC185Q8N715 623 aa13.94□□□□□ -0.18
RPAIN-205ENST00000536255 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.94□□□□□ -0.18
RPAIN-205ENST00000536255 FIBINQ8TAL6 211 aa13.94□□□□□ -0.18
RPAIN-205ENST00000536255 SLC35G2Q8TBE7 412 aa13.94□□□□□ -0.18
RPAIN-205ENST00000536255 UCMAQ8WVF2 138 aa13.94□□□□□ -0.18
RPAIN-205ENST00000536255 PPP1R9BQ96SB3 815 aa13.94□□□□□ -0.18
RPAIN-205ENST00000536255 HINFPQ9BQA5 517 aa13.94□□□□□ -0.18
RPAIN-205ENST00000536255 TPSD1Q9BZJ3 242 aa13.94□□□□□ -0.18
RPAIN-205ENST00000536255 CIPCQ9C0C6 399 aa13.94□□□□□ -0.18
RPAIN-205ENST00000536255 RAB6CQ9H0N0 254 aa13.94□□□□□ -0.18
RPAIN-205ENST00000536255 RETREG1Q9H6L5 497 aa13.94□□□□□ -0.18
RPAIN-205ENST00000536255 ANLNQ9NQW6 1124 aa13.94□□□□□ -0.18
RPAIN-205ENST00000536255 ABCB8Q9NUT2 735 aa13.94□□□□□ -0.18
RPAIN-205ENST00000536255 ELOVL2Q9NXB9 296 aa13.94□□□□□ -0.18
RPAIN-205ENST00000536255 CACNA2D2Q9NY47 1150 aa13.94□□□□□ -0.18
RPAIN-205ENST00000536255 NCDNQ9UBB6 729 aa13.94□□□□□ -0.18
RPAIN-205ENST00000536255 PPARGC1AQ9UBK2 798 aaKnown RBP13.94□□□□□ -0.18
RPAIN-205ENST00000536255 GGA2Q9UJY4 613 aa13.94□□□□□ -0.18
RPAIN-205ENST00000536255 USP18Q9UMW8 372 aa13.94□□□□□ -0.18
RPAIN-205ENST00000536255 GPR179Q6PRD1 2367 aa13.94□□□□□ -0.18
RPAIN-205ENST00000536255 FRYLO94915 3013 aa13.93□□□□□ -0.18
RPAIN-205ENST00000536255 IGLV3-10A0A075B6K4 115 aa13.93□□□□□ -0.18
RPAIN-205ENST00000536255 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.93□□□□□ -0.18
RPAIN-205ENST00000536255 DRGXA6NNA5 263 aa13.93□□□□□ -0.18
RPAIN-205ENST00000536255 I6L893 689 aaPredicted RBP13.93□□□□□ -0.18
RPAIN-205ENST00000536255 SRGAP2O75044 1071 aa13.93□□□□□ -0.18
RPAIN-205ENST00000536255 LRCH4O75427 683 aa13.93□□□□□ -0.18
RPAIN-205ENST00000536255 MOCS3O95396 460 aa13.93□□□□□ -0.18
RPAIN-205ENST00000536255 PABPC1P11940 636 aaKnown RBP13.93□□□□□ -0.18
RPAIN-205ENST00000536255 MIPP30301 263 aa13.93□□□□□ -0.18
RPAIN-205ENST00000536255 HTR7P34969 479 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms