RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 NUDT18Q6ZVK8 323 aa11.66□□□□□ -0.54
TNFRSF1A-208ENST00000536194 H2AFVQ71UI9 128 aa11.66□□□□□ -0.54
TNFRSF1A-208ENST00000536194 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.66□□□□□ -0.54
TNFRSF1A-208ENST00000536194 TMEM139Q8IV31 216 aa11.66□□□□□ -0.54
TNFRSF1A-208ENST00000536194 AHI1Q8N157 1196 aa11.66□□□□□ -0.54
TNFRSF1A-208ENST00000536194 NIPA2Q8N8Q9 360 aa11.66□□□□□ -0.54
TNFRSF1A-208ENST00000536194 KCNV2Q8TDN2 545 aa11.66□□□□□ -0.54
TNFRSF1A-208ENST00000536194 WFIKKN2Q8TEU8 576 aa11.66□□□□□ -0.54
TNFRSF1A-208ENST00000536194 CYB5D2Q8WUJ1 264 aa11.66□□□□□ -0.54
TNFRSF1A-208ENST00000536194 ACDQ96AP0 544 aa11.66□□□□□ -0.54
TNFRSF1A-208ENST00000536194 ALG14Q96F25 216 aa11.66□□□□□ -0.54
TNFRSF1A-208ENST00000536194 HHIPQ96QV1 700 aa11.66□□□□□ -0.54
TNFRSF1A-208ENST00000536194 CIPCQ9C0C6 399 aa11.66□□□□□ -0.54
TNFRSF1A-208ENST00000536194 OSGEPQ9NPF4 335 aa11.66□□□□□ -0.54
TNFRSF1A-208ENST00000536194 FAM86C1Q9NVL1 165 aa11.66□□□□□ -0.54
TNFRSF1A-208ENST00000536194 CACNA2D2Q9NY47 1150 aa11.66□□□□□ -0.54
TNFRSF1A-208ENST00000536194 OR12D3Q9UGF7 316 aa11.66□□□□□ -0.54
TNFRSF1A-208ENST00000536194 TBC1D30Q9Y2I9 924 aa11.66□□□□□ -0.54
TNFRSF1A-208ENST00000536194 OR51B4Q9Y5P0 310 aa11.66□□□□□ -0.54
TNFRSF1A-208ENST00000536194 PLXND1Q9Y4D7 1925 aa11.65□□□□□ -0.54
TNFRSF1A-208ENST00000536194 A0A1W2PQF6 199 aa11.65□□□□□ -0.54
TNFRSF1A-208ENST00000536194 CLDN11O75508 207 aa11.65□□□□□ -0.54
TNFRSF1A-208ENST00000536194 LRIG2O94898 1065 aa11.65□□□□□ -0.54
TNFRSF1A-208ENST00000536194 LCA5LO95447 670 aa11.65□□□□□ -0.54
TNFRSF1A-208ENST00000536194 PRKCHP24723 683 aa11.65□□□□□ -0.54
TNFRSF1A-208ENST00000536194 NTSR1P30989 418 aa11.65□□□□□ -0.54
TNFRSF1A-208ENST00000536194 IL12RB1P42701 662 aa11.65□□□□□ -0.54
TNFRSF1A-208ENST00000536194 CTSOP43234 321 aaPredicted RBP11.65□□□□□ -0.54
TNFRSF1A-208ENST00000536194 PXNP49023 591 aaPredicted RBP11.65□□□□□ -0.54
TNFRSF1A-208ENST00000536194 EIF4HQ15056 248 aaKnown RBP11.65□□□□□ -0.54
TNFRSF1A-208ENST00000536194 CRY1Q16526 586 aa11.65□□□□□ -0.54
TNFRSF1A-208ENST00000536194 PTPRNQ16849 979 aa11.65□□□□□ -0.54
TNFRSF1A-208ENST00000536194 PLEKHG6Q3KR16 790 aa11.65□□□□□ -0.54
TNFRSF1A-208ENST00000536194 ZNF528Q3MIS6 628 aa11.65□□□□□ -0.54
TNFRSF1A-208ENST00000536194 HSF5Q4G112 596 aaPredicted RBP11.65□□□□□ -0.54
TNFRSF1A-208ENST00000536194 ACBD5Q5T8D3 534 aaPredicted RBP11.65□□□□□ -0.54
TNFRSF1A-208ENST00000536194 TXNRD3NBQ6F5E7 133 aa11.65□□□□□ -0.54
TNFRSF1A-208ENST00000536194 KIAA1211LQ6NV74 962 aa11.65□□□□□ -0.54
TNFRSF1A-208ENST00000536194 LRRC31Q6UY01 552 aa11.65□□□□□ -0.54
TNFRSF1A-208ENST00000536194 RAD9BQ6WBX8 426 aa11.65□□□□□ -0.54
TNFRSF1A-208ENST00000536194 TFAP2DQ7Z6R9 452 aa11.65□□□□□ -0.54
TNFRSF1A-208ENST00000536194 NLRP14Q86W24 1093 aa11.65□□□□□ -0.54
TNFRSF1A-208ENST00000536194 CCDC26Q8TAB7 109 aa11.65□□□□□ -0.54
TNFRSF1A-208ENST00000536194 ZNF564Q8TBZ8 553 aaPredicted RBP11.65□□□□□ -0.54
TNFRSF1A-208ENST00000536194 CTNNBL1Q8WYA6 563 aaPredicted RBP11.65□□□□□ -0.54
TNFRSF1A-208ENST00000536194 TTC17Q96AE7 1141 aa11.65□□□□□ -0.54
TNFRSF1A-208ENST00000536194 ERLEC1Q96DZ1 483 aa11.65□□□□□ -0.54
TNFRSF1A-208ENST00000536194 MYO19Q96H55 970 aa11.65□□□□□ -0.54
TNFRSF1A-208ENST00000536194 PHOX2BQ99453 314 aa11.65□□□□□ -0.54
TNFRSF1A-208ENST00000536194 GABRG3Q99928 467 aa11.65□□□□□ -0.54
TNFRSF1A-208ENST00000536194 SNRNP25Q9BV90 132 aaKnown RBP11.65□□□□□ -0.54
TNFRSF1A-208ENST00000536194 NDFIP2Q9NV92 336 aa11.65□□□□□ -0.54
TNFRSF1A-208ENST00000536194 KIAA1522Q9P206 1035 aaPredicted RBP11.65□□□□□ -0.54
TNFRSF1A-208ENST00000536194 CTTNBP2NLQ9P2B4 639 aa11.65□□□□□ -0.54
TNFRSF1A-208ENST00000536194 IMPACTQ9P2X3 320 aa11.65□□□□□ -0.54
TNFRSF1A-208ENST00000536194 THAP10Q9P2Z0 257 aaPredicted RBP11.65□□□□□ -0.54
TNFRSF1A-208ENST00000536194 PPARGC1AQ9UBK2 798 aaKnown RBP11.65□□□□□ -0.54
TNFRSF1A-208ENST00000536194 PCSK1NQ9UHG2 260 aa11.65□□□□□ -0.54
TNFRSF1A-208ENST00000536194 TFR2Q9UP52 801 aa11.65□□□□□ -0.54
TNFRSF1A-208ENST00000536194 AP4E1Q9UPM8 1137 aa11.65□□□□□ -0.54
TNFRSF1A-208ENST00000536194 ARIH1Q9Y4X5 557 aaPredicted RBP11.65□□□□□ -0.54
TNFRSF1A-208ENST00000536194 STON1Q9Y6Q2 735 aa11.65□□□□□ -0.54
TNFRSF1A-208ENST00000536194 MUC6Q6W4X9 2439 aa11.64□□□□□ -0.55
TNFRSF1A-208ENST00000536194 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.64□□□□□ -0.55
TNFRSF1A-208ENST00000536194 TIMM44O43615 452 aa11.64□□□□□ -0.55
TNFRSF1A-208ENST00000536194 RNF8O76064 485 aa11.64□□□□□ -0.55
TNFRSF1A-208ENST00000536194 HOXB2P14652 356 aa11.64□□□□□ -0.55
TNFRSF1A-208ENST00000536194 HOXA6P31267 233 aa11.64□□□□□ -0.55
TNFRSF1A-208ENST00000536194 L1CAMP32004 1257 aa11.64□□□□□ -0.55
TNFRSF1A-208ENST00000536194 PCK1P35558 622 aa11.64□□□□□ -0.55
TNFRSF1A-208ENST00000536194 FNTBP49356 437 aa11.64□□□□□ -0.55
TNFRSF1A-208ENST00000536194 NHLH1Q02575 133 aa11.64□□□□□ -0.55
TNFRSF1A-208ENST00000536194 SLC25A11Q02978 314 aaKnown RBP11.64□□□□□ -0.55
TNFRSF1A-208ENST00000536194 ZNF177Q13360 481 aaPredicted RBP11.64□□□□□ -0.55
TNFRSF1A-208ENST00000536194 PIGHQ14442 188 aaPredicted RBP11.64□□□□□ -0.55
TNFRSF1A-208ENST00000536194 EFHC2Q5JST6 749 aa11.64□□□□□ -0.55
TNFRSF1A-208ENST00000536194 EOGTQ5NDL2 527 aa11.64□□□□□ -0.55
TNFRSF1A-208ENST00000536194 HEATR6Q6AI08 1181 aaKnown RBP11.64□□□□□ -0.55
TNFRSF1A-208ENST00000536194 SETD3Q86TU7 594 aaPredicted RBP11.64□□□□□ -0.55
TNFRSF1A-208ENST00000536194 CCDC170Q8IYT3 715 aa11.64□□□□□ -0.55
TNFRSF1A-208ENST00000536194 CHPFQ8IZ52 775 aa11.64□□□□□ -0.55
TNFRSF1A-208ENST00000536194 ZNF557Q8N988 423 aaPredicted RBP11.64□□□□□ -0.55
TNFRSF1A-208ENST00000536194 ZBTB44Q8NCP5 570 aa11.64□□□□□ -0.55
TNFRSF1A-208ENST00000536194 SLC35G2Q8TBE7 412 aa11.64□□□□□ -0.55
TNFRSF1A-208ENST00000536194 UCMAQ8WVF2 138 aa11.64□□□□□ -0.55
TNFRSF1A-208ENST00000536194 MRGPRX3Q96LB0 322 aa11.64□□□□□ -0.55
TNFRSF1A-208ENST00000536194 KCTD15Q96SI1 283 aaPredicted RBP11.64□□□□□ -0.55
TNFRSF1A-208ENST00000536194 PSMB7Q99436 277 aa11.64□□□□□ -0.55
TNFRSF1A-208ENST00000536194 FEM1AQ9BSK4 669 aa11.64□□□□□ -0.55
TNFRSF1A-208ENST00000536194 ZYG11BQ9C0D3 744 aa11.64□□□□□ -0.55
TNFRSF1A-208ENST00000536194 TMEM245Q9H330 911 aa11.64□□□□□ -0.55
TNFRSF1A-208ENST00000536194 UVRAGQ9P2Y5 699 aa11.64□□□□□ -0.55
TNFRSF1A-208ENST00000536194 IP6K2Q9UHH9 426 aa11.64□□□□□ -0.55
TNFRSF1A-208ENST00000536194 USP18Q9UMW8 372 aa11.64□□□□□ -0.55
TNFRSF1A-208ENST00000536194 SLC8A2Q9UPR5 921 aa11.64□□□□□ -0.55
TNFRSF1A-208ENST00000536194 REXO2Q9Y3B8 237 aaKnown RBP11.64□□□□□ -0.55
TNFRSF1A-208ENST00000536194 RAD54BQ9Y620 910 aa11.64□□□□□ -0.55
TNFRSF1A-208ENST00000536194 R4GN57 208 aa11.64□□□□□ -0.55
TNFRSF1A-208ENST00000536194 A0A0D9SEW6 157 aa11.63□□□□□ -0.55
TNFRSF1A-208ENST00000536194 EIF3CLB5ME19 914 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms