RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 MTA1Q13330 715 aa18.42■□□□□ 0.54
DDX55-204ENST00000536079 ZNF234Q14588 700 aa18.42■□□□□ 0.54
DDX55-204ENST00000536079 ARL13BQ3SXY8 428 aa18.42■□□□□ 0.54
DDX55-204ENST00000536079 PITRM1Q5JRX3 1037 aa18.42■□□□□ 0.54
DDX55-204ENST00000536079 HEATR6Q6AI08 1181 aaKnown RBP18.42■□□□□ 0.54
DDX55-204ENST00000536079 TXNRD3NBQ6F5E7 133 aa18.42■□□□□ 0.54
DDX55-204ENST00000536079 RAD9BQ6WBX8 426 aa18.42■□□□□ 0.54
DDX55-204ENST00000536079 H2AFVQ71UI9 128 aa18.42■□□□□ 0.54
DDX55-204ENST00000536079 TFAP2DQ7Z6R9 452 aa18.42■□□□□ 0.54
DDX55-204ENST00000536079 TMEM139Q8IV31 216 aa18.42■□□□□ 0.54
DDX55-204ENST00000536079 PRRX2Q99811 253 aa18.42■□□□□ 0.54
DDX55-204ENST00000536079 NDFIP2Q9NV92 336 aa18.42■□□□□ 0.54
DDX55-204ENST00000536079 TMEM51Q9NW97 253 aa18.42■□□□□ 0.54
DDX55-204ENST00000536079 ANAPC7Q9UJX3 599 aa18.42■□□□□ 0.54
DDX55-204ENST00000536079 OR51B4Q9Y5P0 310 aa18.42■□□□□ 0.54
DDX55-204ENST00000536079 LRIG2O94898 1065 aa18.41■□□□□ 0.54
DDX55-204ENST00000536079 PRKCHP24723 683 aa18.41■□□□□ 0.54
DDX55-204ENST00000536079 FNTBP49356 437 aa18.41■□□□□ 0.54
DDX55-204ENST00000536079 PTPN5P54829 565 aa18.41■□□□□ 0.54
DDX55-204ENST00000536079 CDH4P55283 916 aa18.41■□□□□ 0.54
DDX55-204ENST00000536079 NRG1Q02297 640 aaPredicted RBP18.41■□□□□ 0.54
DDX55-204ENST00000536079 CRY1Q16526 586 aa18.41■□□□□ 0.54
DDX55-204ENST00000536079 TTC39BQ5VTQ0 682 aaPredicted RBP18.41■□□□□ 0.54
DDX55-204ENST00000536079 AHI1Q8N157 1196 aa18.41■□□□□ 0.54
DDX55-204ENST00000536079 ZNF564Q8TBZ8 553 aaPredicted RBP18.41■□□□□ 0.54
DDX55-204ENST00000536079 KCNV2Q8TDN2 545 aa18.41■□□□□ 0.54
DDX55-204ENST00000536079 WFIKKN2Q8TEU8 576 aa18.41■□□□□ 0.54
DDX55-204ENST00000536079 TTC17Q96AE7 1141 aa18.41■□□□□ 0.54
DDX55-204ENST00000536079 ACDQ96AP0 544 aa18.41■□□□□ 0.54
DDX55-204ENST00000536079 MYO19Q96H55 970 aa18.41■□□□□ 0.54
DDX55-204ENST00000536079 MRGPRX3Q96LB0 322 aa18.41■□□□□ 0.54
DDX55-204ENST00000536079 SNRNP25Q9BV90 132 aaKnown RBP18.41■□□□□ 0.54
DDX55-204ENST00000536079 KIAA1522Q9P206 1035 aaPredicted RBP18.41■□□□□ 0.54
DDX55-204ENST00000536079 CTTNBP2NLQ9P2B4 639 aa18.41■□□□□ 0.54
DDX55-204ENST00000536079 SLC8A2Q9UPR5 921 aa18.41■□□□□ 0.54
DDX55-204ENST00000536079 TBC1D30Q9Y2I9 924 aa18.41■□□□□ 0.54
DDX55-204ENST00000536079 STON1Q9Y6Q2 735 aa18.41■□□□□ 0.54
DDX55-204ENST00000536079 R4GN57 208 aa18.41■□□□□ 0.54
DDX55-204ENST00000536079 VPS13AQ96RL7 3174 aa18.4■□□□□ 0.54
DDX55-204ENST00000536079 CLDN11O75508 207 aa18.4■□□□□ 0.54
DDX55-204ENST00000536079 LCA5LO95447 670 aa18.4■□□□□ 0.54
DDX55-204ENST00000536079 HLA-EP13747 358 aa18.4■□□□□ 0.54
DDX55-204ENST00000536079 NTSR1P30989 418 aa18.4■□□□□ 0.54
DDX55-204ENST00000536079 NHLH1Q02575 133 aa18.4■□□□□ 0.54
DDX55-204ENST00000536079 SEMA3BQ13214 749 aa18.4■□□□□ 0.54
DDX55-204ENST00000536079 SRSF5Q13243 272 aaKnown RBP18.4■□□□□ 0.54
DDX55-204ENST00000536079 ENPP2Q13822 863 aa18.4■□□□□ 0.54
DDX55-204ENST00000536079 PLEKHG6Q3KR16 790 aa18.4■□□□□ 0.54
DDX55-204ENST00000536079 LRRC31Q6UY01 552 aa18.4■□□□□ 0.54
DDX55-204ENST00000536079 NUDT18Q6ZVK8 323 aa18.4■□□□□ 0.54
DDX55-204ENST00000536079 NLRP14Q86W24 1093 aa18.4■□□□□ 0.54
DDX55-204ENST00000536079 CHPFQ8IZ52 775 aa18.4■□□□□ 0.54
DDX55-204ENST00000536079 ZNF366Q8N895 744 aa18.4■□□□□ 0.54
DDX55-204ENST00000536079 CCDC26Q8TAB7 109 aa18.4■□□□□ 0.54
DDX55-204ENST00000536079 SLC35G2Q8TBE7 412 aa18.4■□□□□ 0.54
DDX55-204ENST00000536079 ATOH1Q92858 354 aaPredicted RBP18.4■□□□□ 0.54
DDX55-204ENST00000536079 KCTD15Q96SI1 283 aaPredicted RBP18.4■□□□□ 0.54
DDX55-204ENST00000536079 PSMB7Q99436 277 aa18.4■□□□□ 0.54
DDX55-204ENST00000536079 GABRG3Q99928 467 aa18.4■□□□□ 0.54
DDX55-204ENST00000536079 MTG2Q9H4K7 406 aa18.4■□□□□ 0.54
DDX55-204ENST00000536079 PPARGC1AQ9UBK2 798 aaKnown RBP18.4■□□□□ 0.54
DDX55-204ENST00000536079 REXO2Q9Y3B8 237 aaKnown RBP18.4■□□□□ 0.54
DDX55-204ENST00000536079 MYO18AQ92614 2054 aaKnown RBP18.39■□□□□ 0.53
DDX55-204ENST00000536079 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.39■□□□□ 0.53
DDX55-204ENST00000536079 A0A0D9SEW6 157 aa18.39■□□□□ 0.53
DDX55-204ENST00000536079 TIMM44O43615 452 aa18.39■□□□□ 0.53
DDX55-204ENST00000536079 POLR2EP19388 210 aaKnown RBP18.39■□□□□ 0.53
DDX55-204ENST00000536079 ZNF177Q13360 481 aaPredicted RBP18.39■□□□□ 0.53
DDX55-204ENST00000536079 EIF4HQ15056 248 aaKnown RBP18.39■□□□□ 0.53
DDX55-204ENST00000536079 ZNF528Q3MIS6 628 aa18.39■□□□□ 0.53
DDX55-204ENST00000536079 HSF5Q4G112 596 aaPredicted RBP18.39■□□□□ 0.53
DDX55-204ENST00000536079 EOGTQ5NDL2 527 aa18.39■□□□□ 0.53
DDX55-204ENST00000536079 RNF219Q5W0B1 726 aaPredicted RBP18.39■□□□□ 0.53
DDX55-204ENST00000536079 RWDD4Q6NW29 188 aaKnown RBP18.39■□□□□ 0.53
DDX55-204ENST00000536079 NIPA2Q8N8Q9 360 aa18.39■□□□□ 0.53
DDX55-204ENST00000536079 CTNNBL1Q8WYA6 563 aaPredicted RBP18.39■□□□□ 0.53
DDX55-204ENST00000536079 FEM1AQ9BSK4 669 aa18.39■□□□□ 0.53
DDX55-204ENST00000536079 ZYG11BQ9C0D3 744 aa18.39■□□□□ 0.53
DDX55-204ENST00000536079 SLC6A17Q9H1V8 727 aa18.39■□□□□ 0.53
DDX55-204ENST00000536079 IMPACTQ9P2X3 320 aa18.39■□□□□ 0.53
DDX55-204ENST00000536079 USP18Q9UMW8 372 aa18.39■□□□□ 0.53
DDX55-204ENST00000536079 MUC22E2RYF6 1773 aaPredicted RBP18.38■□□□□ 0.53
DDX55-204ENST00000536079 CACNA1HO95180 2353 aa18.38■□□□□ 0.53
DDX55-204ENST00000536079 RCCD1A6NED2 376 aa18.38■□□□□ 0.53
DDX55-204ENST00000536079 CREB3O43889 395 aa18.38■□□□□ 0.53
DDX55-204ENST00000536079 RNF8O76064 485 aa18.38■□□□□ 0.53
DDX55-204ENST00000536079 DLDP09622 509 aaKnown RBP18.38■□□□□ 0.53
DDX55-204ENST00000536079 HOXB2P14652 356 aa18.38■□□□□ 0.53
DDX55-204ENST00000536079 L1CAMP32004 1257 aa18.38■□□□□ 0.53
DDX55-204ENST00000536079 PCK1P35558 622 aa18.38■□□□□ 0.53
DDX55-204ENST00000536079 STK19P49842 368 aaPredicted RBP18.38■□□□□ 0.53
DDX55-204ENST00000536079 PLK1P53350 603 aa18.38■□□□□ 0.53
DDX55-204ENST00000536079 SLC25A11Q02978 314 aaKnown RBP18.38■□□□□ 0.53
DDX55-204ENST00000536079 PIGHQ14442 188 aaPredicted RBP18.38■□□□□ 0.53
DDX55-204ENST00000536079 SMTNL2Q2TAL5 461 aa18.38■□□□□ 0.53
DDX55-204ENST00000536079 EFHC2Q5JST6 749 aa18.38■□□□□ 0.53
DDX55-204ENST00000536079 KCNT1Q5JUK3 1230 aa18.38■□□□□ 0.53
DDX55-204ENST00000536079 ERMARDQ5T6L9 678 aa18.38■□□□□ 0.53
DDX55-204ENST00000536079 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.38■□□□□ 0.53
DDX55-204ENST00000536079 ZBTB44Q8NCP5 570 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms