RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 RAP1GAP2Q684P5 730 aa9.15□□□□□ -0.94
CHD4-204ENST00000535810 MBLAC2Q68D91 279 aa9.15□□□□□ -0.94
CHD4-204ENST00000535810 SLC36A4Q6YBV0 504 aa9.15□□□□□ -0.94
CHD4-204ENST00000535810 APTXQ7Z2E3 356 aaKnown RBP9.15□□□□□ -0.94
CHD4-204ENST00000535810 CHSY1Q86X52 802 aa9.15□□□□□ -0.94
CHD4-204ENST00000535810 LGI2Q8N0V4 545 aa9.15□□□□□ -0.94
CHD4-204ENST00000535810 CFAP52Q8N1V2 620 aa9.15□□□□□ -0.94
CHD4-204ENST00000535810 ZNF397Q8NF99 534 aaPredicted RBP9.15□□□□□ -0.94
CHD4-204ENST00000535810 FIBINQ8TAL6 211 aa9.15□□□□□ -0.94
CHD4-204ENST00000535810 PIGKQ92643 395 aa9.15□□□□□ -0.94
CHD4-204ENST00000535810 WNT2BQ93097 391 aa9.15□□□□□ -0.94
CHD4-204ENST00000535810 PRMT1Q99873 361 aaKnown RBP9.15□□□□□ -0.94
CHD4-204ENST00000535810 PDCL3Q9H2J4 239 aa9.15□□□□□ -0.94
CHD4-204ENST00000535810 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.15□□□□□ -0.94
CHD4-204ENST00000535810 COX16Q9P0S2 106 aa9.15□□□□□ -0.94
CHD4-204ENST00000535810 USP36Q9P275 1121 aaKnown RBP9.15□□□□□ -0.94
CHD4-204ENST00000535810 LIMA1Q9UHB6 759 aaKnown RBP9.15□□□□□ -0.94
CHD4-204ENST00000535810 PLA2G4CQ9UP65 541 aa9.15□□□□□ -0.94
CHD4-204ENST00000535810 TNRC6BQ9UPQ9 1833 aaKnown RBP9.15□□□□□ -0.95
CHD4-204ENST00000535810 ATXN2Q99700 1313 aaKnown RBP9.14□□□□□ -0.95
CHD4-204ENST00000535810 LRRC10BA6NIK2 292 aa9.14□□□□□ -0.95
CHD4-204ENST00000535810 PATE3B3GLJ2 98 aa9.14□□□□□ -0.95
CHD4-204ENST00000535810 F5H5T6 163 aa9.14□□□□□ -0.95
CHD4-204ENST00000535810 GFPT2O94808 682 aa9.14□□□□□ -0.95
CHD4-204ENST00000535810 ATP5BP06576 529 aaKnown RBP9.14□□□□□ -0.95
CHD4-204ENST00000535810 MMEP08473 750 aa9.14□□□□□ -0.95
CHD4-204ENST00000535810 ABCB4P21439 1286 aa9.14□□□□□ -0.95
CHD4-204ENST00000535810 ITPKAP23677 461 aa9.14□□□□□ -0.95
CHD4-204ENST00000535810 NOS2P35228 1153 aa9.14□□□□□ -0.95
CHD4-204ENST00000535810 SOX5P35711 763 aa9.14□□□□□ -0.95
CHD4-204ENST00000535810 SCNN1AP37088 669 aa9.14□□□□□ -0.95
CHD4-204ENST00000535810 CSKP41240 450 aa9.14□□□□□ -0.95
CHD4-204ENST00000535810 MATKP42679 507 aa9.14□□□□□ -0.95
CHD4-204ENST00000535810 GABRB2P47870 512 aa9.14□□□□□ -0.95
CHD4-204ENST00000535810 NOMO3P69849 1222 aa9.14□□□□□ -0.95
CHD4-204ENST00000535810 CDR2Q01850 454 aa9.14□□□□□ -0.95
CHD4-204ENST00000535810 NME3Q13232 169 aa9.14□□□□□ -0.95
CHD4-204ENST00000535810 CAMK2GQ13555 558 aaPredicted RBP9.14□□□□□ -0.95
CHD4-204ENST00000535810 FNDC3BQ53EP0 1204 aaKnown RBP9.14□□□□□ -0.95
CHD4-204ENST00000535810 C2CD6Q53TS8 623 aa9.14□□□□□ -0.95
CHD4-204ENST00000535810 FSCBQ5H9T9 825 aa9.14□□□□□ -0.95
CHD4-204ENST00000535810 STPG1Q5TH74 334 aa9.14□□□□□ -0.95
CHD4-204ENST00000535810 PEAR1Q5VY43 1037 aaPredicted RBP9.14□□□□□ -0.95
CHD4-204ENST00000535810 NAA35Q5VZE5 725 aa9.14□□□□□ -0.95
CHD4-204ENST00000535810 MMS22LQ6ZRQ5 1243 aa9.14□□□□□ -0.95
CHD4-204ENST00000535810 CACUL1Q86Y37 369 aa9.14□□□□□ -0.95
CHD4-204ENST00000535810 XYLT1Q86Y38 959 aa9.14□□□□□ -0.95
CHD4-204ENST00000535810 TMPRSS6Q8IU80 811 aa9.14□□□□□ -0.95
CHD4-204ENST00000535810 SYT12Q8IV01 421 aa9.14□□□□□ -0.95
CHD4-204ENST00000535810 SLC41A1Q8IVJ1 513 aa9.14□□□□□ -0.95
CHD4-204ENST00000535810 CARNMT1Q8N4J0 409 aa9.14□□□□□ -0.95
CHD4-204ENST00000535810 DEFB119Q8N690 84 aa9.14□□□□□ -0.95
CHD4-204ENST00000535810 ZNF366Q8N895 744 aa9.14□□□□□ -0.95
CHD4-204ENST00000535810 ATP6V0D2Q8N8Y2 350 aa9.14□□□□□ -0.95
CHD4-204ENST00000535810 ANKRD20A12PQ8NF67 263 aa9.14□□□□□ -0.95
CHD4-204ENST00000535810 OR2T3Q8NH03 318 aa9.14□□□□□ -0.95
CHD4-204ENST00000535810 SLC20A1Q8WUM9 679 aa9.14□□□□□ -0.95
CHD4-204ENST00000535810 TTC17Q96AE7 1141 aa9.14□□□□□ -0.95
CHD4-204ENST00000535810 C18orf8Q96DM3 657 aa9.14□□□□□ -0.95
CHD4-204ENST00000535810 SIPA1Q96FS4 1042 aa9.14□□□□□ -0.95
CHD4-204ENST00000535810 HSPA12BQ96MM6 686 aa9.14□□□□□ -0.95
CHD4-204ENST00000535810 NPY6RQ99463 290 aa9.14□□□□□ -0.95
CHD4-204ENST00000535810 EDEM2Q9BV94 578 aa9.14□□□□□ -0.95
CHD4-204ENST00000535810 PRDM16Q9HAZ2 1276 aa9.14□□□□□ -0.95
CHD4-204ENST00000535810 NLRC4Q9NPP4 1024 aa9.14□□□□□ -0.95
CHD4-204ENST00000535810 PIGVQ9NUD9 493 aa9.14□□□□□ -0.95
CHD4-204ENST00000535810 TMEM74BQ9NUR3 256 aa9.14□□□□□ -0.95
CHD4-204ENST00000535810 PILRBQ9UKJ0 227 aa9.14□□□□□ -0.95
CHD4-204ENST00000535810 INTS6Q9UL03 887 aaKnown RBP9.14□□□□□ -0.95
CHD4-204ENST00000535810 DAAM1Q9Y4D1 1078 aa9.14□□□□□ -0.95
CHD4-204ENST00000535810 SMG1Q96Q15 3661 aaKnown RBP9.14□□□□□ -0.95
CHD4-204ENST00000535810 PI4KAP42356 2102 aa9.14□□□□□ -0.95
CHD4-204ENST00000535810 CACNA1EQ15878 2313 aa9.14□□□□□ -0.95
CHD4-204ENST00000535810 A0A1B0GVM2 712 aa9.13□□□□□ -0.95
CHD4-204ENST00000535810 TCAF2A6NFQ2 919 aa9.13□□□□□ -0.95
CHD4-204ENST00000535810 H0Y626 953 aa9.13□□□□□ -0.95
CHD4-204ENST00000535810 I6L893 689 aaPredicted RBP9.13□□□□□ -0.95
CHD4-204ENST00000535810 M0QYT0 321 aa9.13□□□□□ -0.95
CHD4-204ENST00000535810 KHNYNO15037 678 aaKnown RBP9.13□□□□□ -0.95
CHD4-204ENST00000535810 IGLV3-19P01714 112 aa9.13□□□□□ -0.95
CHD4-204ENST00000535810 PROS1P07225 676 aa9.13□□□□□ -0.95
CHD4-204ENST00000535810 ATP1A3P13637 1013 aa9.13□□□□□ -0.95
CHD4-204ENST00000535810 CHRNB2P17787 502 aa9.13□□□□□ -0.95
CHD4-204ENST00000535810 POLR2EP19388 210 aaKnown RBP9.13□□□□□ -0.95
CHD4-204ENST00000535810 TFE3P19532 575 aaPredicted RBP9.13□□□□□ -0.95
CHD4-204ENST00000535810 PMLP29590 882 aa9.13□□□□□ -0.95
CHD4-204ENST00000535810 CD6P30203 668 aa9.13□□□□□ -0.95
CHD4-204ENST00000535810 HOXD12P35452 270 aa9.13□□□□□ -0.95
CHD4-204ENST00000535810 DEKP35659 375 aaKnown RBP9.13□□□□□ -0.95
CHD4-204ENST00000535810 FLT3P36888 993 aa9.13□□□□□ -0.95
CHD4-204ENST00000535810 DPP6P42658 865 aa9.13□□□□□ -0.95
CHD4-204ENST00000535810 SULT1E1P49888 294 aa9.13□□□□□ -0.95
CHD4-204ENST00000535810 TPMTP51580 245 aa9.13□□□□□ -0.95
CHD4-204ENST00000535810 RNASE9P60153 205 aaKnown RBP9.13□□□□□ -0.95
CHD4-204ENST00000535810 FMO1Q01740 532 aa9.13□□□□□ -0.95
CHD4-204ENST00000535810 CENPCQ03188 943 aa9.13□□□□□ -0.95
CHD4-204ENST00000535810 UBXN1Q04323 297 aa9.13□□□□□ -0.95
CHD4-204ENST00000535810 ZNF33AQ06730 810 aa9.13□□□□□ -0.95
CHD4-204ENST00000535810 PLEKHG6Q3KR16 790 aa9.13□□□□□ -0.95
CHD4-204ENST00000535810 ANO6Q4KMQ2 910 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms