RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 SMYD4Q8IYR2 804 aaPredicted RBP11.62□□□□□ -0.55
CLSTN3-206ENST00000535668 UBA3Q8TBC4 463 aa11.62□□□□□ -0.55
CLSTN3-206ENST00000535668 DQX1Q8TE96 717 aaKnown RBP11.62□□□□□ -0.55
CLSTN3-206ENST00000535668 NT5C1BQ96P26 610 aa11.62□□□□□ -0.55
CLSTN3-206ENST00000535668 PRMT1Q99873 361 aaKnown RBP11.62□□□□□ -0.55
CLSTN3-206ENST00000535668 ACE2Q9BYF1 805 aaPredicted RBP11.62□□□□□ -0.55
CLSTN3-206ENST00000535668 MMRN2Q9H8L6 949 aa11.62□□□□□ -0.55
CLSTN3-206ENST00000535668 EBF2Q9HAK2 575 aa11.62□□□□□ -0.55
CLSTN3-206ENST00000535668 NCKAP1Q9Y2A7 1128 aa11.62□□□□□ -0.55
CLSTN3-206ENST00000535668 ZNF462Q96JM2 2506 aa11.62□□□□□ -0.55
CLSTN3-206ENST00000535668 TRABD2BA6NFA1 517 aa11.61□□□□□ -0.55
CLSTN3-206ENST00000535668 LRRC72A6NJI9 287 aa11.61□□□□□ -0.55
CLSTN3-206ENST00000535668 KCNU1A8MYU2 1149 aa11.61□□□□□ -0.55
CLSTN3-206ENST00000535668 TK2O00142 265 aa11.61□□□□□ -0.55
CLSTN3-206ENST00000535668 ALOX15BO15296 676 aa11.61□□□□□ -0.55
CLSTN3-206ENST00000535668 TBL1XO60907 577 aa11.61□□□□□ -0.55
CLSTN3-206ENST00000535668 SIN3BO75182 1162 aa11.61□□□□□ -0.55
CLSTN3-206ENST00000535668 LUC7L3O95232 432 aaKnown RBP11.61□□□□□ -0.55
CLSTN3-206ENST00000535668 SMC2O95347 1197 aa11.61□□□□□ -0.55
CLSTN3-206ENST00000535668 ADH1BP00325 375 aa11.61□□□□□ -0.55
CLSTN3-206ENST00000535668 CD19P15391 556 aa11.61□□□□□ -0.55
CLSTN3-206ENST00000535668 ST8SIA6P61647 398 aa11.61□□□□□ -0.55
CLSTN3-206ENST00000535668 CETN1Q12798 172 aa11.61□□□□□ -0.55
CLSTN3-206ENST00000535668 PNOCQ13519 176 aa11.61□□□□□ -0.55
CLSTN3-206ENST00000535668 RTP5Q14D33 572 aa11.61□□□□□ -0.55
CLSTN3-206ENST00000535668 PITRM1Q5JRX3 1037 aa11.61□□□□□ -0.55
CLSTN3-206ENST00000535668 TTC39BQ5VTQ0 682 aaPredicted RBP11.61□□□□□ -0.55
CLSTN3-206ENST00000535668 TTI2Q6NXR4 508 aa11.61□□□□□ -0.55
CLSTN3-206ENST00000535668 RFWD3Q6PCD5 774 aa11.61□□□□□ -0.55
CLSTN3-206ENST00000535668 TRIM59Q8IWR1 403 aa11.61□□□□□ -0.55
CLSTN3-206ENST00000535668 OXR1Q8N573 874 aa11.61□□□□□ -0.55
CLSTN3-206ENST00000535668 MFSD2AQ8NA29 543 aa11.61□□□□□ -0.55
CLSTN3-206ENST00000535668 FRS2Q8WU20 508 aa11.61□□□□□ -0.55
CLSTN3-206ENST00000535668 PTPRN2Q92932 1015 aa11.61□□□□□ -0.55
CLSTN3-206ENST00000535668 BTN2A3PQ96KV6 586 aa11.61□□□□□ -0.55
CLSTN3-206ENST00000535668 FAM81BQ96LP2 452 aa11.61□□□□□ -0.55
CLSTN3-206ENST00000535668 NRSN2Q9GZP1 204 aa11.61□□□□□ -0.55
CLSTN3-206ENST00000535668 ASNSD1Q9NWL6 643 aa11.61□□□□□ -0.55
CLSTN3-206ENST00000535668 FBXL12Q9NXK8 326 aa11.61□□□□□ -0.55
CLSTN3-206ENST00000535668 ERVW-1Q9UQF0 538 aa11.61□□□□□ -0.55
CLSTN3-206ENST00000535668 DMTF1Q9Y222 760 aa11.61□□□□□ -0.55
CLSTN3-206ENST00000535668 TMEM131Q92545 1883 aa11.61□□□□□ -0.55
CLSTN3-206ENST00000535668 COL6A6A6NMZ7 2263 aa11.6□□□□□ -0.55
CLSTN3-206ENST00000535668 CXorf51AA0A1B0GTR3 108 aa11.6□□□□□ -0.55
CLSTN3-206ENST00000535668 TYW5A2RUC4 315 aaKnown RBP11.6□□□□□ -0.55
CLSTN3-206ENST00000535668 PSMA7O14818 248 aa11.6□□□□□ -0.55
CLSTN3-206ENST00000535668 LZTS3O60299 673 aaPredicted RBP11.6□□□□□ -0.55
CLSTN3-206ENST00000535668 RNGTTO60942 597 aaKnown RBP11.6□□□□□ -0.55
CLSTN3-206ENST00000535668 GNA14O95837 355 aa11.6□□□□□ -0.55
CLSTN3-206ENST00000535668 WNT1P04628 370 aa11.6□□□□□ -0.55
CLSTN3-206ENST00000535668 SLC2A3P11169 496 aa11.6□□□□□ -0.55
CLSTN3-206ENST00000535668 PRKCSHP14314 528 aaPredicted RBP11.6□□□□□ -0.55
CLSTN3-206ENST00000535668 CD38P28907 300 aa11.6□□□□□ -0.55
CLSTN3-206ENST00000535668 RPS24P62847 133 aaKnown RBP11.6□□□□□ -0.55
CLSTN3-206ENST00000535668 YWHAZP63104 245 aaKnown RBP11.6□□□□□ -0.55
CLSTN3-206ENST00000535668 ECT2LQ008S8 904 aa11.6□□□□□ -0.55
CLSTN3-206ENST00000535668 DCAF6Q58WW2 860 aa11.6□□□□□ -0.55
CLSTN3-206ENST00000535668 DCAF17Q5H9S7 520 aaPredicted RBP11.6□□□□□ -0.55
CLSTN3-206ENST00000535668 FSCBQ5H9T9 825 aa11.6□□□□□ -0.55
CLSTN3-206ENST00000535668 TCERG1LQ5VWI1 586 aa11.6□□□□□ -0.55
CLSTN3-206ENST00000535668 SND1Q7KZF4 910 aaKnown RBP eCLIP11.6□□□□□ -0.553e-8■■■■□ 26.2
CLSTN3-206ENST00000535668 ENOSF1Q7L5Y1 443 aa11.6□□□□□ -0.55
CLSTN3-206ENST00000535668 FAM124AQ86V42 546 aa11.6□□□□□ -0.55
CLSTN3-206ENST00000535668 TRIM69Q86WT6 500 aa11.6□□□□□ -0.55
CLSTN3-206ENST00000535668 EHBP1Q8NDI1 1231 aa11.6□□□□□ -0.55
CLSTN3-206ENST00000535668 MDM1Q8TC05 714 aa11.6□□□□□ -0.55
CLSTN3-206ENST00000535668 MYEOVQ96EZ4 313 aa11.6□□□□□ -0.55
CLSTN3-206ENST00000535668 ALG14Q96F25 216 aa11.6□□□□□ -0.55
CLSTN3-206ENST00000535668 SPAG5Q96R06 1193 aa11.6□□□□□ -0.55
CLSTN3-206ENST00000535668 MED15Q96RN5 788 aa11.6□□□□□ -0.55
CLSTN3-206ENST00000535668 PPP1R9BQ96SB3 815 aa11.6□□□□□ -0.55
CLSTN3-206ENST00000535668 NEUROG2Q9H2A3 272 aa11.6□□□□□ -0.55
CLSTN3-206ENST00000535668 THAP9Q9H5L6 903 aa11.6□□□□□ -0.55
CLSTN3-206ENST00000535668 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.6□□□□□ -0.55
CLSTN3-206ENST00000535668 ARHGAP20Q9P2F6 1191 aa11.6□□□□□ -0.55
CLSTN3-206ENST00000535668 SERGEFQ9UGK8 458 aa11.6□□□□□ -0.55
CLSTN3-206ENST00000535668 SPTA1P02549 2419 aa11.59□□□□□ -0.55
CLSTN3-206ENST00000535668 MGAQ8IWI9 3026 aa11.59□□□□□ -0.55
CLSTN3-206ENST00000535668 GOLGA6L7A0A1B0GV03 622 aa11.59□□□□□ -0.55
CLSTN3-206ENST00000535668 RIOK3O14730 519 aaKnown RBP11.59□□□□□ -0.55
CLSTN3-206ENST00000535668 ATP9BO43861 1147 aa11.59□□□□□ -0.55
CLSTN3-206ENST00000535668 FSBPO95073 299 aa11.59□□□□□ -0.55
CLSTN3-206ENST00000535668 MOCS3O95396 460 aa11.59□□□□□ -0.55
CLSTN3-206ENST00000535668 LCP1P13796 627 aa11.59□□□□□ -0.55
CLSTN3-206ENST00000535668 EPHA8P29322 1005 aaPredicted RBP11.59□□□□□ -0.55
CLSTN3-206ENST00000535668 SLC8A1P32418 973 aa11.59□□□□□ -0.55
CLSTN3-206ENST00000535668 DRD3P35462 400 aa11.59□□□□□ -0.55
CLSTN3-206ENST00000535668 ARRB1P49407 418 aaPredicted RBP11.59□□□□□ -0.55
CLSTN3-206ENST00000535668 ADPRHP54922 357 aa11.59□□□□□ -0.55
CLSTN3-206ENST00000535668 NXPH1P58417 271 aa11.59□□□□□ -0.55
CLSTN3-206ENST00000535668 COL28A1Q2UY09 1125 aa11.59□□□□□ -0.55
CLSTN3-206ENST00000535668 ACBD5Q5T8D3 534 aaPredicted RBP11.59□□□□□ -0.55
CLSTN3-206ENST00000535668 SYPL2Q5VXT5 272 aa11.59□□□□□ -0.55
CLSTN3-206ENST00000535668 NEK5Q6P3R8 708 aa11.59□□□□□ -0.55
CLSTN3-206ENST00000535668 FBXL19Q6PCT2 694 aa11.59□□□□□ -0.55
CLSTN3-206ENST00000535668 NCEH1Q6PIU2 408 aa11.59□□□□□ -0.55
CLSTN3-206ENST00000535668 AADATQ8N5Z0 425 aa11.59□□□□□ -0.55
CLSTN3-206ENST00000535668 ZNF366Q8N895 744 aa11.59□□□□□ -0.55
CLSTN3-206ENST00000535668 ERLEC1Q96DZ1 483 aa11.59□□□□□ -0.55
CLSTN3-206ENST00000535668 KREMEN1Q96MU8 473 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms