RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 ARRDC4Q8NCT1 418 aa6.85□□□□□ -1.31
USP28-202ENST00000535607 HIPK4Q8NE63 616 aa6.85□□□□□ -1.31
USP28-202ENST00000535607 CCDC110Q8TBZ0 833 aa6.85□□□□□ -1.31
USP28-202ENST00000535607 NCSTNQ92542 709 aa6.85□□□□□ -1.31
USP28-202ENST00000535607 GLG1Q92896 1179 aa6.85□□□□□ -1.31
USP28-202ENST00000535607 E2F7Q96AV8 911 aa6.85□□□□□ -1.31
USP28-202ENST00000535607 FAM136AQ96C01 138 aa6.85□□□□□ -1.31
USP28-202ENST00000535607 ZNF653Q96CK0 615 aa6.85□□□□□ -1.31
USP28-202ENST00000535607 DNAJC19Q96DA6 116 aa6.85□□□□□ -1.31
USP28-202ENST00000535607 C18orf8Q96DM3 657 aa6.85□□□□□ -1.31
USP28-202ENST00000535607 HIC2Q96JB3 615 aa6.85□□□□□ -1.31
USP28-202ENST00000535607 CATSPER2Q96P56 530 aa6.85□□□□□ -1.31
USP28-202ENST00000535607 NDNQ99608 321 aa6.85□□□□□ -1.31
USP28-202ENST00000535607 OSBPL8Q9BZF1 889 aa6.85□□□□□ -1.31
USP28-202ENST00000535607 KIAA1683Q9H0B3 1180 aa6.85□□□□□ -1.31
USP28-202ENST00000535607 KCTD10Q9H3F6 313 aa6.85□□□□□ -1.31
USP28-202ENST00000535607 ZHX3Q9H4I2 956 aa6.85□□□□□ -1.31
USP28-202ENST00000535607 PCDH18Q9HCL0 1135 aa6.85□□□□□ -1.31
USP28-202ENST00000535607 SEPT11Q9NVA2 429 aaKnown RBP6.85□□□□□ -1.31
USP28-202ENST00000535607 NMRK1Q9NWW6 199 aa6.85□□□□□ -1.31
USP28-202ENST00000535607 UVRAGQ9P2Y5 699 aa6.85□□□□□ -1.31
USP28-202ENST00000535607 SLC24A2Q9UI40 661 aa6.85□□□□□ -1.31
USP28-202ENST00000535607 HERC5Q9UII4 1024 aaKnown RBP6.85□□□□□ -1.31
USP28-202ENST00000535607 SERPINB13Q9UIV8 391 aa6.85□□□□□ -1.31
USP28-202ENST00000535607 DNM3Q9UQ16 869 aa6.85□□□□□ -1.31
USP28-202ENST00000535607 ALG6Q9Y672 507 aa6.85□□□□□ -1.31
USP28-202ENST00000535607 GREB1LQ9C091 1923 aaPredicted RBP6.85□□□□□ -1.31
USP28-202ENST00000535607 ARHGAP10A1A4S6 786 aa6.84□□□□□ -1.31
USP28-202ENST00000535607 IPO5O00410 1097 aaKnown RBP6.84□□□□□ -1.31
USP28-202ENST00000535607 NEMP1O14524 444 aa6.84□□□□□ -1.31
USP28-202ENST00000535607 CAPN9O14815 690 aa6.84□□□□□ -1.31
USP28-202ENST00000535607 TM9SF1O15321 606 aa6.84□□□□□ -1.31
USP28-202ENST00000535607 EIF3DO15371 548 aaKnown RBP eCLIP6.84□□□□□ -1.31
USP28-202ENST00000535607 P4HA2O15460 535 aa6.84□□□□□ -1.31
USP28-202ENST00000535607 EDF1O60869 148 aaKnown RBP6.84□□□□□ -1.31
USP28-202ENST00000535607 ACSL3O95573 720 aa6.84□□□□□ -1.31
USP28-202ENST00000535607 LTFP02788 710 aa6.84□□□□□ -1.31
USP28-202ENST00000535607 NR3C1P04150 777 aa6.84□□□□□ -1.31
USP28-202ENST00000535607 CPA3P15088 417 aa6.84□□□□□ -1.31
USP28-202ENST00000535607 ZFXP17010 805 aaPredicted RBP6.84□□□□□ -1.31
USP28-202ENST00000535607 SLC9A1P19634 815 aa6.84□□□□□ -1.31
USP28-202ENST00000535607 EPHB2P29323 1055 aa6.84□□□□□ -1.31
USP28-202ENST00000535607 ADCY8P40145 1251 aa6.84□□□□□ -1.31
USP28-202ENST00000535607 RGS2P41220 211 aa6.84□□□□□ -1.31
USP28-202ENST00000535607 ADCYAP1R1P41586 468 aa6.84□□□□□ -1.31
USP28-202ENST00000535607 SLC1A1P43005 524 aa6.84□□□□□ -1.31
USP28-202ENST00000535607 CDK7P50613 346 aa6.84□□□□□ -1.31
USP28-202ENST00000535607 KRT17Q04695 432 aa6.84□□□□□ -1.31
USP28-202ENST00000535607 DEUP1Q05D60 604 aa6.84□□□□□ -1.31
USP28-202ENST00000535607 ASPHQ12797 758 aa6.84□□□□□ -1.31
USP28-202ENST00000535607 PICALMQ13492 652 aa6.84□□□□□ -1.31
USP28-202ENST00000535607 CYLC2Q14093 348 aaPredicted RBP6.84□□□□□ -1.31
USP28-202ENST00000535607 MYBPC2Q14324 1141 aa6.84□□□□□ -1.31
USP28-202ENST00000535607 KIF22Q14807 665 aa6.84□□□□□ -1.31
USP28-202ENST00000535607 ADRM1Q16186 407 aa6.84□□□□□ -1.31
USP28-202ENST00000535607 BMT2Q1RMZ1 405 aa6.84□□□□□ -1.31
USP28-202ENST00000535607 LIN52Q52LA3 116 aa6.84□□□□□ -1.31
USP28-202ENST00000535607 ASPRV1Q53RT3 343 aa6.84□□□□□ -1.31
USP28-202ENST00000535607 RNF220Q5VTB9 566 aa6.84□□□□□ -1.31
USP28-202ENST00000535607 AAGABQ6PD74 315 aa6.84□□□□□ -1.31
USP28-202ENST00000535607 MAPKAPK5Q8IW41 473 aa6.84□□□□□ -1.31
USP28-202ENST00000535607 PRELID2Q8N945 189 aa6.84□□□□□ -1.31
USP28-202ENST00000535607 FBXO15Q8NCQ5 510 aaPredicted RBP6.84□□□□□ -1.31
USP28-202ENST00000535607 SH3RF2Q8TEC5 729 aa6.84□□□□□ -1.31
USP28-202ENST00000535607 FAM151AQ8WW52 585 aa6.84□□□□□ -1.31
USP28-202ENST00000535607 HAUS1Q96CS2 278 aa6.84□□□□□ -1.31
USP28-202ENST00000535607 PRMT6Q96LA8 375 aaPredicted RBP6.84□□□□□ -1.31
USP28-202ENST00000535607 RMDN2Q96LZ7 410 aa6.84□□□□□ -1.31
USP28-202ENST00000535607 PLEKHG4BQ96PX9 1271 aa6.84□□□□□ -1.31
USP28-202ENST00000535607 AGPAT1Q99943 283 aa6.84□□□□□ -1.31
USP28-202ENST00000535607 SPATA16Q9BXB7 569 aa6.84□□□□□ -1.31
USP28-202ENST00000535607 RNF38Q9H0F5 515 aa6.84□□□□□ -1.31
USP28-202ENST00000535607 DDX4Q9NQI0 724 aaKnown RBP6.84□□□□□ -1.31
USP28-202ENST00000535607 NDE1Q9NXR1 346 aa6.84□□□□□ -1.31
USP28-202ENST00000535607 PI4KBQ9UBF8 816 aa6.84□□□□□ -1.31
USP28-202ENST00000535607 ZNF70Q9UC06 446 aaPredicted RBP6.84□□□□□ -1.31
USP28-202ENST00000535607 NKX1-2Q9UD57 310 aaPredicted RBP6.84□□□□□ -1.31
USP28-202ENST00000535607 FETUBQ9UGM5 382 aa6.84□□□□□ -1.31
USP28-202ENST00000535607 DDX25Q9UHL0 483 aaKnown RBP6.84□□□□□ -1.31
USP28-202ENST00000535607 HACL1Q9UJ83 578 aa6.84□□□□□ -1.31
USP28-202ENST00000535607 PCDHA3Q9Y5H8 950 aa6.84□□□□□ -1.31
USP28-202ENST00000535607 SPO11Q9Y5K1 396 aa6.84□□□□□ -1.31
USP28-202ENST00000535607 CNTNAP1P78357 1384 aa6.83□□□□□ -1.32
USP28-202ENST00000535607 ZMYM2Q9UBW7 1377 aa6.83□□□□□ -1.32
USP28-202ENST00000535607 PAPPA2Q9BXP8 1791 aa6.83□□□□□ -1.32
USP28-202ENST00000535607 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.83□□□□□ -1.32
USP28-202ENST00000535607 EXOC1LA0A1B0GW35 172 aa6.83□□□□□ -1.32
USP28-202ENST00000535607 H0Y3Z8 333 aa6.83□□□□□ -1.32
USP28-202ENST00000535607 PEX10O60683 326 aa6.83□□□□□ -1.32
USP28-202ENST00000535607 MAGEC1O60732 1142 aa6.83□□□□□ -1.32
USP28-202ENST00000535607 ZBED4O75132 1171 aa6.83□□□□□ -1.32
USP28-202ENST00000535607 DDNO94850 711 aaPredicted RBP6.83□□□□□ -1.32
USP28-202ENST00000535607 TGDSO95455 350 aa6.83□□□□□ -1.32
USP28-202ENST00000535607 FAM200BP0CF97 657 aa6.83□□□□□ -1.32
USP28-202ENST00000535607 GZMAP12544 262 aa6.83□□□□□ -1.32
USP28-202ENST00000535607 BPIP17213 487 aa6.83□□□□□ -1.32
USP28-202ENST00000535607 TAL1P17542 331 aaPredicted RBP6.83□□□□□ -1.32
USP28-202ENST00000535607 ABCB4P21439 1286 aa6.83□□□□□ -1.32
USP28-202ENST00000535607 CA4P22748 312 aa6.83□□□□□ -1.32
USP28-202ENST00000535607 CD40P25942 277 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms