RNA–Protein interactions for RNA: ENST00000535527.5

CHFR-210, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 746 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-210ENST00000535527 FZD10Q9ULW2 581 aa13.53□□□□□ -0.24
CHFR-210ENST00000535527 EIF3CLB5ME19 914 aaKnown RBP13.52□□□□□ -0.25
CHFR-210ENST00000535527 SLC30A4O14863 429 aa13.52□□□□□ -0.25
CHFR-210ENST00000535527 GBP1P32455 592 aa13.52□□□□□ -0.25
CHFR-210ENST00000535527 CHKAP35790 457 aa13.52□□□□□ -0.25
CHFR-210ENST00000535527 EIF2DP41214 584 aaKnown RBP13.52□□□□□ -0.25
CHFR-210ENST00000535527 SEC13P55735 322 aa13.52□□□□□ -0.25
CHFR-210ENST00000535527 SCAPQ12770 1279 aa13.52□□□□□ -0.25
CHFR-210ENST00000535527 LMAN2Q12907 356 aa13.52□□□□□ -0.25
CHFR-210ENST00000535527 MTAPQ13126 283 aa13.52□□□□□ -0.25
CHFR-210ENST00000535527 MPPE1Q53F39 396 aa13.52□□□□□ -0.25
CHFR-210ENST00000535527 EGFLAMQ63HQ2 1017 aa13.52□□□□□ -0.25
CHFR-210ENST00000535527 PPP1R2P3Q6NXS1 205 aa13.52□□□□□ -0.25
CHFR-210ENST00000535527 ADIPOR2Q86V24 386 aa13.52□□□□□ -0.25
CHFR-210ENST00000535527 CCAR2Q8N163 923 aaKnown RBP13.52□□□□□ -0.25
CHFR-210ENST00000535527 NIPA2Q8N8Q9 360 aa13.52□□□□□ -0.25
CHFR-210ENST00000535527 HJURPQ8NCD3 748 aaPredicted RBP13.52□□□□□ -0.25
CHFR-210ENST00000535527 DDI1Q8WTU0 396 aa13.52□□□□□ -0.25
CHFR-210ENST00000535527 RNF34Q969K3 372 aa13.52□□□□□ -0.25
CHFR-210ENST00000535527 TRIM11Q96F44 468 aa13.52□□□□□ -0.25
CHFR-210ENST00000535527 MSANTD3Q96H12 275 aa13.52□□□□□ -0.25
CHFR-210ENST00000535527 KCTD15Q96SI1 283 aaPredicted RBP13.52□□□□□ -0.25
CHFR-210ENST00000535527 PNKPQ96T60 521 aa13.52□□□□□ -0.25
CHFR-210ENST00000535527 EIF3CQ99613 913 aaKnown RBP13.52□□□□□ -0.25
CHFR-210ENST00000535527 BAG1Q99933 345 aaPredicted RBP13.52□□□□□ -0.25
CHFR-210ENST00000535527 KCNF1Q9H3M0 494 aa13.52□□□□□ -0.25
CHFR-210ENST00000535527 CD248Q9HCU0 757 aa13.52□□□□□ -0.25
CHFR-210ENST00000535527 ARHGEF4Q9NR80 690 aa13.52□□□□□ -0.25
CHFR-210ENST00000535527 PCSK1NQ9UHG2 260 aa13.52□□□□□ -0.25
CHFR-210ENST00000535527 MFHAS1Q9Y4C4 1052 aa13.52□□□□□ -0.25
CHFR-210ENST00000535527 HYOU1Q9Y4L1 999 aa13.52□□□□□ -0.25
CHFR-210ENST00000535527 EPN1Q9Y6I3 576 aaPredicted RBP13.52□□□□□ -0.25
CHFR-210ENST00000535527 SCINQ9Y6U3 715 aa13.52□□□□□ -0.25
CHFR-210ENST00000535527 DUSP10Q9Y6W6 482 aa13.52□□□□□ -0.25
CHFR-210ENST00000535527 BAHCC1Q9P281 2608 aa13.51□□□□□ -0.25
CHFR-210ENST00000535527 ANKRD36A6QL64 1941 aa13.51□□□□□ -0.25
CHFR-210ENST00000535527 A0A0A0MRY4 1105 aa13.51□□□□□ -0.25
CHFR-210ENST00000535527 E9PAM4 449 aa13.51□□□□□ -0.25
CHFR-210ENST00000535527 F5H5T6 163 aa13.51□□□□□ -0.25
CHFR-210ENST00000535527 MAN2B1O00754 1011 aa13.51□□□□□ -0.25
CHFR-210ENST00000535527 ADAM23O75077 832 aa13.51□□□□□ -0.25
CHFR-210ENST00000535527 MTA2O94776 668 aa13.51□□□□□ -0.25
CHFR-210ENST00000535527 LRIG2O94898 1065 aa13.51□□□□□ -0.25
CHFR-210ENST00000535527 LUC7L3O95232 432 aaKnown RBP13.51□□□□□ -0.25
CHFR-210ENST00000535527 TDGF1P13385 188 aa13.51□□□□□ -0.25
CHFR-210ENST00000535527 MZF1P28698 734 aaPredicted RBP13.51□□□□□ -0.25
CHFR-210ENST00000535527 DGKGP49619 791 aa13.51□□□□□ -0.25
CHFR-210ENST00000535527 NRLP54845 237 aa13.51□□□□□ -0.25
CHFR-210ENST00000535527 SMTNL2Q2TAL5 461 aa13.51□□□□□ -0.25
CHFR-210ENST00000535527 ATP13A4Q4VNC1 1196 aa13.51□□□□□ -0.25
CHFR-210ENST00000535527 PPM1JQ5JR12 505 aa13.51□□□□□ -0.25
CHFR-210ENST00000535527 GRAMD4Q6IC98 578 aa13.51□□□□□ -0.25
CHFR-210ENST00000535527 MAMSTRQ6ZN01 415 aa13.51□□□□□ -0.25
CHFR-210ENST00000535527 NLRP14Q86W24 1093 aa13.51□□□□□ -0.25
CHFR-210ENST00000535527 APCDD1Q8J025 514 aa13.51□□□□□ -0.25
CHFR-210ENST00000535527 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.51□□□□□ -0.25
CHFR-210ENST00000535527 NETO2Q8NC67 525 aa13.51□□□□□ -0.25
CHFR-210ENST00000535527 SLC35G2Q8TBE7 412 aa13.51□□□□□ -0.25
CHFR-210ENST00000535527 USP33Q8TEY7 942 aa13.51□□□□□ -0.25
CHFR-210ENST00000535527 RFFLQ8WZ73 363 aa13.51□□□□□ -0.25
CHFR-210ENST00000535527 ERLEC1Q96DZ1 483 aa13.51□□□□□ -0.25
CHFR-210ENST00000535527 TMA16Q96EY4 203 aaKnown RBP13.51□□□□□ -0.25
CHFR-210ENST00000535527 ALG14Q96F25 216 aa13.51□□□□□ -0.25
CHFR-210ENST00000535527 MYO19Q96H55 970 aa13.51□□□□□ -0.25
CHFR-210ENST00000535527 PDLIM2Q96JY6 352 aa13.51□□□□□ -0.25
CHFR-210ENST00000535527 PRMT8Q9NR22 394 aaPredicted RBP13.51□□□□□ -0.25
CHFR-210ENST00000535527 ABCB8Q9NUT2 735 aa13.51□□□□□ -0.25
CHFR-210ENST00000535527 CTTNBP2NLQ9P2B4 639 aa13.51□□□□□ -0.25
CHFR-210ENST00000535527 RAB23Q9ULC3 237 aa13.51□□□□□ -0.25
CHFR-210ENST00000535527 SLC27A6Q9Y2P4 619 aa13.51□□□□□ -0.25
CHFR-210ENST00000535527 PCDHA13Q9Y5I0 950 aa13.51□□□□□ -0.25
CHFR-210ENST00000535527 TNRC6BQ9UPQ9 1833 aaKnown RBP13.5□□□□□ -0.25
CHFR-210ENST00000535527 DRGXA6NNA5 263 aa13.5□□□□□ -0.25
CHFR-210ENST00000535527 FOXD2O60548 495 aaPredicted RBP13.5□□□□□ -0.25
CHFR-210ENST00000535527 F9P00740 461 aa13.5□□□□□ -0.25
CHFR-210ENST00000535527 SLC2A3P11169 496 aa13.5□□□□□ -0.25
CHFR-210ENST00000535527 CSKP41240 450 aa13.5□□□□□ -0.25
CHFR-210ENST00000535527 CTSOP43234 321 aaPredicted RBP13.5□□□□□ -0.25
CHFR-210ENST00000535527 MAGEA1P43355 309 aa13.5□□□□□ -0.25
CHFR-210ENST00000535527 SATB1Q01826 763 aa13.5□□□□□ -0.25
CHFR-210ENST00000535527 NRG1Q02297 640 aaPredicted RBP13.5□□□□□ -0.25
CHFR-210ENST00000535527 DMWDQ09019 674 aa13.5□□□□□ -0.25
CHFR-210ENST00000535527 NR1H3Q13133 447 aa13.5□□□□□ -0.25
CHFR-210ENST00000535527 TCEAL1Q15170 157 aa13.5□□□□□ -0.25
CHFR-210ENST00000535527 PTPRNQ16849 979 aa13.5□□□□□ -0.25
CHFR-210ENST00000535527 KCNT1Q5JUK3 1230 aa13.5□□□□□ -0.25
CHFR-210ENST00000535527 DGKKQ5KSL6 1271 aa13.5□□□□□ -0.25
CHFR-210ENST00000535527 C10orf76Q5T2E6 689 aa13.5□□□□□ -0.25
CHFR-210ENST00000535527 LAIR1Q6GTX8 287 aa13.5□□□□□ -0.25
CHFR-210ENST00000535527 SCYL2Q6P3W7 929 aa13.5□□□□□ -0.25
CHFR-210ENST00000535527 TSSK4Q6SA08 328 aa13.5□□□□□ -0.25
CHFR-210ENST00000535527 ANKS1BQ7Z6G8 1248 aa13.5□□□□□ -0.25
CHFR-210ENST00000535527 TFAP2DQ7Z6R9 452 aa13.5□□□□□ -0.25
CHFR-210ENST00000535527 TMTC1Q8IUR5 882 aa13.5□□□□□ -0.25
CHFR-210ENST00000535527 CCDC170Q8IYT3 715 aa13.5□□□□□ -0.25
CHFR-210ENST00000535527 CARNMT1Q8N4J0 409 aa13.5□□□□□ -0.25
CHFR-210ENST00000535527 RPLP0P6Q8NHW5 317 aa13.5□□□□□ -0.25
CHFR-210ENST00000535527 CTNNBL1Q8WYA6 563 aaPredicted RBP13.5□□□□□ -0.25
CHFR-210ENST00000535527 RPRD1AQ96P16 312 aaPredicted RBP13.5□□□□□ -0.25
CHFR-210ENST00000535527 HAPLN3Q96S86 360 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms