RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 A0A1W2PR77 199 aa22.08■■□□□ 1.13
SSH3-211ENST00000534112 M0QYV0 167 aa22.08■■□□□ 1.13
SSH3-211ENST00000534112 WNT9AO14904 365 aa22.08■■□□□ 1.13
SSH3-211ENST00000534112 FBXO21O94952 628 aa22.08■■□□□ 1.13
SSH3-211ENST00000534112 SRPRAP08240 638 aaKnown RBP22.08■■□□□ 1.13
SSH3-211ENST00000534112 CCR5P51681 352 aa22.08■■□□□ 1.13
SSH3-211ENST00000534112 PMS1P54277 932 aaKnown RBP22.08■■□□□ 1.13
SSH3-211ENST00000534112 PNOCQ13519 176 aa22.08■■□□□ 1.13
SSH3-211ENST00000534112 MS4A13Q5J8X5 152 aa22.08■■□□□ 1.13
SSH3-211ENST00000534112 PITRM1Q5JRX3 1037 aa22.08■■□□□ 1.13
SSH3-211ENST00000534112 CFAP52Q8N1V2 620 aa22.08■■□□□ 1.13
SSH3-211ENST00000534112 DQX1Q8TE96 717 aaKnown RBP22.08■■□□□ 1.13
SSH3-211ENST00000534112 CCDC34Q96HJ3 373 aa22.08■■□□□ 1.13
SSH3-211ENST00000534112 DCBLD2Q96PD2 775 aa22.08■■□□□ 1.13
SSH3-211ENST00000534112 SCAND2PQ9GZW5 306 aaPredicted RBP22.08■■□□□ 1.13
SSH3-211ENST00000534112 GDF3Q9NR23 364 aa22.08■■□□□ 1.13
SSH3-211ENST00000534112 RMND1Q9NWS8 449 aa22.08■■□□□ 1.13
SSH3-211ENST00000534112 SLCO3A1Q9UIG8 710 aa22.08■■□□□ 1.13
SSH3-211ENST00000534112 TLR6Q9Y2C9 796 aa22.08■■□□□ 1.13
SSH3-211ENST00000534112 EDDM13A0A1B0GTR0 161 aa22.07■■□□□ 1.12
SSH3-211ENST00000534112 C1SP09871 688 aa22.07■■□□□ 1.12
SSH3-211ENST00000534112 CDK4P11802 303 aa22.07■■□□□ 1.12
SSH3-211ENST00000534112 BRD2P25440 801 aaKnown RBP22.07■■□□□ 1.12
SSH3-211ENST00000534112 CLDN6P56747 220 aa22.07■■□□□ 1.12
SSH3-211ENST00000534112 DNAJC3Q13217 504 aa22.07■■□□□ 1.12
SSH3-211ENST00000534112 STILQ15468 1287 aa22.07■■□□□ 1.12
SSH3-211ENST00000534112 COBLL1Q53SF7 1204 aa22.07■■□□□ 1.12
SSH3-211ENST00000534112 DCAF6Q58WW2 860 aa22.07■■□□□ 1.12
SSH3-211ENST00000534112 AADATQ8N5Z0 425 aa22.07■■□□□ 1.12
SSH3-211ENST00000534112 SLC39A13Q96H72 371 aa22.07■■□□□ 1.12
SSH3-211ENST00000534112 SERPINB11Q96P15 392 aa22.07■■□□□ 1.12
SSH3-211ENST00000534112 MIS12Q9H081 205 aa22.07■■□□□ 1.12
SSH3-211ENST00000534112 RFPL3O75679 317 aa22.06■■□□□ 1.12
SSH3-211ENST00000534112 LUC7L3O95232 432 aaKnown RBP22.06■■□□□ 1.12
SSH3-211ENST00000534112 MOCS3O95396 460 aa22.06■■□□□ 1.12
SSH3-211ENST00000534112 CALCAP01258 141 aa22.06■■□□□ 1.12
SSH3-211ENST00000534112 GOT1P17174 413 aa22.06■■□□□ 1.12
SSH3-211ENST00000534112 HNF1BP35680 557 aa22.06■■□□□ 1.12
SSH3-211ENST00000534112 ABCG1P45844 678 aa22.06■■□□□ 1.12
SSH3-211ENST00000534112 PSMD8P48556 350 aa22.06■■□□□ 1.12
SSH3-211ENST00000534112 FMO5P49326 533 aa22.06■■□□□ 1.12
SSH3-211ENST00000534112 ECT2LQ008S8 904 aa22.06■■□□□ 1.12
SSH3-211ENST00000534112 NNTQ13423 1086 aa22.06■■□□□ 1.12
SSH3-211ENST00000534112 C6orf118Q5T5N4 469 aa22.06■■□□□ 1.12
SSH3-211ENST00000534112 ZNF658Q5TYW1 1059 aaPredicted RBP22.06■■□□□ 1.12
SSH3-211ENST00000534112 STK40Q8N2I9 435 aa22.06■■□□□ 1.12
SSH3-211ENST00000534112 EID2Q8N6I1 236 aa22.06■■□□□ 1.12
SSH3-211ENST00000534112 OR14C36Q8NHC7 312 aa22.06■■□□□ 1.12
SSH3-211ENST00000534112 KAT5Q92993 513 aa22.06■■□□□ 1.12
SSH3-211ENST00000534112 NXPE2Q96DL1 559 aa22.06■■□□□ 1.12
SSH3-211ENST00000534112 SERAC1Q96JX3 654 aa22.06■■□□□ 1.12
SSH3-211ENST00000534112 NT5C1BQ96P26 610 aa22.06■■□□□ 1.12
SSH3-211ENST00000534112 NAALADL1Q9UQQ1 740 aa22.06■■□□□ 1.12
SSH3-211ENST00000534112 CEP83Q9Y592 693 aa22.06■■□□□ 1.12
SSH3-211ENST00000534112 ITIH6Q6UXX5 1313 aa22.06■■□□□ 1.12
SSH3-211ENST00000534112 TLR4O00206 839 aa22.05■■□□□ 1.12
SSH3-211ENST00000534112 YKT6O15498 198 aa22.05■■□□□ 1.12
SSH3-211ENST00000534112 MOCS2O96007 188 aaPredicted RBP22.05■■□□□ 1.12
SSH3-211ENST00000534112 C5AR1P21730 350 aa22.05■■□□□ 1.12
SSH3-211ENST00000534112 ARRB1P49407 418 aaPredicted RBP22.05■■□□□ 1.12
SSH3-211ENST00000534112 ACADVLP49748 655 aa22.05■■□□□ 1.12
SSH3-211ENST00000534112 ADPRHP54922 357 aa22.05■■□□□ 1.12
SSH3-211ENST00000534112 SND1Q7KZF4 910 aaKnown RBP eCLIP22.05■■□□□ 1.12
SSH3-211ENST00000534112 APCDD1Q8J025 514 aa22.05■■□□□ 1.12
SSH3-211ENST00000534112 PPM1KQ8N3J5 372 aa22.05■■□□□ 1.12
SSH3-211ENST00000534112 ADAM32Q8TC27 787 aa22.05■■□□□ 1.12
SSH3-211ENST00000534112 PTPRN2Q92932 1015 aa22.05■■□□□ 1.12
SSH3-211ENST00000534112 RPL10LQ96L21 214 aaKnown RBP22.05■■□□□ 1.12
SSH3-211ENST00000534112 XPO7Q9UIA9 1087 aaKnown RBP22.05■■□□□ 1.12
SSH3-211ENST00000534112 TPX2Q9ULW0 747 aaKnown RBP22.05■■□□□ 1.12
SSH3-211ENST00000534112 TRIM49BA6NDI0 452 aa22.04■■□□□ 1.12
SSH3-211ENST00000534112 PMM2O15305 246 aa22.04■■□□□ 1.12
SSH3-211ENST00000534112 ADH1BP00325 375 aa22.04■■□□□ 1.12
SSH3-211ENST00000534112 EPHA8P29322 1005 aaPredicted RBP22.04■■□□□ 1.12
SSH3-211ENST00000534112 NXPH1P58417 271 aa22.04■■□□□ 1.12
SSH3-211ENST00000534112 LRRC63Q05C16 580 aa22.04■■□□□ 1.12
SSH3-211ENST00000534112 TARDBPQ13148 414 aaKnown RBP eCLIP22.04■■□□□ 1.12
SSH3-211ENST00000534112 RNF219Q5W0B1 726 aaPredicted RBP22.04■■□□□ 1.12
SSH3-211ENST00000534112 LGI2Q8N0V4 545 aa22.04■■□□□ 1.12
SSH3-211ENST00000534112 PIP4K2CQ8TBX8 421 aa22.04■■□□□ 1.12
SSH3-211ENST00000534112 TSC1Q92574 1164 aa22.04■■□□□ 1.12
SSH3-211ENST00000534112 FAM149B1Q96BN6 582 aa22.04■■□□□ 1.12
SSH3-211ENST00000534112 GSDMAQ96QA5 445 aa22.04■■□□□ 1.12
SSH3-211ENST00000534112 METTL14Q9HCE5 456 aaKnown RBP22.04■■□□□ 1.12
SSH3-211ENST00000534112 HELZ2Q9BYK8 2649 aaKnown RBP22.03■■□□□ 1.12
SSH3-211ENST00000534112 IL1BP01584 269 aa22.03■■□□□ 1.12
SSH3-211ENST00000534112 ITPKBP27987 946 aa22.03■■□□□ 1.12
SSH3-211ENST00000534112 RXRGP48443 463 aa22.03■■□□□ 1.12
SSH3-211ENST00000534112 RPL34P49207 117 aaKnown RBP22.03■■□□□ 1.12
SSH3-211ENST00000534112 SEMG2Q02383 582 aa22.03■■□□□ 1.12
SSH3-211ENST00000534112 BNIP3Q12983 259 aa22.03■■□□□ 1.12
SSH3-211ENST00000534112 SLC45A4Q5BKX6 768 aa22.03■■□□□ 1.12
SSH3-211ENST00000534112 SYPL2Q5VXT5 272 aa22.03■■□□□ 1.12
SSH3-211ENST00000534112 TAC4Q86UU9 113 aa22.03■■□□□ 1.12
SSH3-211ENST00000534112 ERVMER34-1Q9H9K5 563 aa22.03■■□□□ 1.12
SSH3-211ENST00000534112 GDPD2Q9HCC8 539 aa22.03■■□□□ 1.12
SSH3-211ENST00000534112 ATP6V1DQ9Y5K8 247 aa22.03■■□□□ 1.12
SSH3-211ENST00000534112 AK5Q9Y6K8 562 aa22.03■■□□□ 1.12
SSH3-211ENST00000534112 TBC1D3DA0A087WVF3 549 aa22.02■■□□□ 1.12
SSH3-211ENST00000534112 TBC1D3IA0A087WXS9 549 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms