RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 GABRG2P18507 467 aa13.79□□□□□ -0.2
CAPN1-227ENST00000533909 ZNF143P52747 638 aaPredicted RBP13.79□□□□□ -0.2
CAPN1-227ENST00000533909 CDH4P55283 916 aa13.79□□□□□ -0.2
CAPN1-227ENST00000533909 SULT2A1Q06520 285 aa13.79□□□□□ -0.2
CAPN1-227ENST00000533909 FSCBQ5H9T9 825 aa13.79□□□□□ -0.2
CAPN1-227ENST00000533909 KIAA1211LQ6NV74 962 aa13.79□□□□□ -0.2
CAPN1-227ENST00000533909 C14orf80Q86SX3 495 aa13.79□□□□□ -0.2
CAPN1-227ENST00000533909 KBTBD6Q86V97 674 aa13.79□□□□□ -0.2
CAPN1-227ENST00000533909 IGSF8Q969P0 613 aa13.79□□□□□ -0.2
CAPN1-227ENST00000533909 C1orf74Q96LT6 269 aa13.79□□□□□ -0.2
CAPN1-227ENST00000533909 CNPY3Q9BT09 278 aa13.79□□□□□ -0.2
CAPN1-227ENST00000533909 SYT11Q9BT88 431 aa13.79□□□□□ -0.2
CAPN1-227ENST00000533909 ADAM33Q9BZ11 813 aa13.79□□□□□ -0.2
CAPN1-227ENST00000533909 TRIM5Q9C035 493 aa13.79□□□□□ -0.2
CAPN1-227ENST00000533909 MUC3BQ9H195 1237 aa13.79□□□□□ -0.2
CAPN1-227ENST00000533909 DEF6Q9H4E7 631 aa13.79□□□□□ -0.2
CAPN1-227ENST00000533909 PRDM16Q9HAZ2 1276 aa13.79□□□□□ -0.2
CAPN1-227ENST00000533909 MRPL47Q9HD33 250 aaKnown RBP13.79□□□□□ -0.2
CAPN1-227ENST00000533909 CNOT8Q9UFF9 292 aaKnown RBP13.79□□□□□ -0.2
CAPN1-227ENST00000533909 VPS28Q9UK41 221 aa13.79□□□□□ -0.2
CAPN1-227ENST00000533909 SNX10Q9Y5X0 201 aa13.79□□□□□ -0.2
CAPN1-227ENST00000533909 SDK1Q7Z5N4 2213 aa13.78□□□□□ -0.2
CAPN1-227ENST00000533909 DMDP11532 3685 aa13.78□□□□□ -0.2
CAPN1-227ENST00000533909 E9PAM4 449 aa13.78□□□□□ -0.2
CAPN1-227ENST00000533909 DDX3XO00571 662 aaKnown RBP eCLIP13.78□□□□□ -0.22e-15■■■■□ 22.6
CAPN1-227ENST00000533909 DCLK1O15075 740 aa13.78□□□□□ -0.2
CAPN1-227ENST00000533909 ATMINO43313 823 aaPredicted RBP13.78□□□□□ -0.2
CAPN1-227ENST00000533909 ZNF217O75362 1048 aa13.78□□□□□ -0.2
CAPN1-227ENST00000533909 ENDOD1O94919 500 aa13.78□□□□□ -0.2
CAPN1-227ENST00000533909 RETP07949 1114 aa13.78□□□□□ -0.2
CAPN1-227ENST00000533909 RHOCP08134 193 aa13.78□□□□□ -0.2
CAPN1-227ENST00000533909 ACADMP11310 421 aa13.78□□□□□ -0.2
CAPN1-227ENST00000533909 HLA-EP13747 358 aa13.78□□□□□ -0.2
CAPN1-227ENST00000533909 NDUFV2P19404 249 aa13.78□□□□□ -0.2
CAPN1-227ENST00000533909 PRKCHP24723 683 aa13.78□□□□□ -0.2
CAPN1-227ENST00000533909 PSMA2P25787 234 aa13.78□□□□□ -0.2
CAPN1-227ENST00000533909 ADRA1BP35368 520 aa13.78□□□□□ -0.2
CAPN1-227ENST00000533909 ECT2LQ008S8 904 aa13.78□□□□□ -0.2
CAPN1-227ENST00000533909 MAMLD1Q13495 774 aa13.78□□□□□ -0.2
CAPN1-227ENST00000533909 PLEKHG6Q3KR16 790 aa13.78□□□□□ -0.2
CAPN1-227ENST00000533909 EFHC2Q5JST6 749 aa13.78□□□□□ -0.2
CAPN1-227ENST00000533909 C6orf118Q5T5N4 469 aa13.78□□□□□ -0.2
CAPN1-227ENST00000533909 SH3PXD2AQ5TCZ1 1133 aa13.78□□□□□ -0.2
CAPN1-227ENST00000533909 RWDD4Q6NW29 188 aaKnown RBP13.78□□□□□ -0.2
CAPN1-227ENST00000533909 TFAP2DQ7Z6R9 452 aa13.78□□□□□ -0.2
CAPN1-227ENST00000533909 KIAA0907Q7Z7F0 614 aaPredicted RBP13.78□□□□□ -0.2
CAPN1-227ENST00000533909 VSTM4Q8IW00 320 aa13.78□□□□□ -0.2
CAPN1-227ENST00000533909 FAM160A2Q8N612 972 aaPredicted RBP13.78□□□□□ -0.2
CAPN1-227ENST00000533909 PRCCQ92733 491 aaPredicted RBP13.78□□□□□ -0.2
CAPN1-227ENST00000533909 TTC17Q96AE7 1141 aa13.78□□□□□ -0.2
CAPN1-227ENST00000533909 TMPRSS4Q9NRS4 437 aa13.78□□□□□ -0.2
CAPN1-227ENST00000533909 MYO1AQ9UBC5 1043 aa13.78□□□□□ -0.2
CAPN1-227ENST00000533909 SUN2Q9UH99 717 aa13.78□□□□□ -0.2
CAPN1-227ENST00000533909 ADAMTS1Q9UHI8 967 aa13.78□□□□□ -0.2
CAPN1-227ENST00000533909 SLC25A13Q9UJS0 675 aa13.78□□□□□ -0.2
CAPN1-227ENST00000533909 CCP110O43303 1012 aa13.77□□□□□ -0.21
CAPN1-227ENST00000533909 RNASEH1O60930 286 aaKnown RBP13.77□□□□□ -0.21
CAPN1-227ENST00000533909 RNF8O76064 485 aa13.77□□□□□ -0.21
CAPN1-227ENST00000533909 SRPRAP08240 638 aaKnown RBP13.77□□□□□ -0.21
CAPN1-227ENST00000533909 OR1E1P30953 314 aa13.77□□□□□ -0.21
CAPN1-227ENST00000533909 HDAC4P56524 1084 aa13.77□□□□□ -0.21
CAPN1-227ENST00000533909 RPL7AP62424 266 aaKnown RBP13.77□□□□□ -0.21
CAPN1-227ENST00000533909 ENPP2Q13822 863 aa13.77□□□□□ -0.21
CAPN1-227ENST00000533909 HGSNATQ68CP4 663 aa13.77□□□□□ -0.21
CAPN1-227ENST00000533909 LPCAT2Q7L5N7 544 aa13.77□□□□□ -0.21
CAPN1-227ENST00000533909 TMC6Q7Z403 805 aa13.77□□□□□ -0.21
CAPN1-227ENST00000533909 BNIPLQ7Z465 357 aa13.77□□□□□ -0.21
CAPN1-227ENST00000533909 SLFN11Q7Z7L1 901 aa13.77□□□□□ -0.21
CAPN1-227ENST00000533909 CACUL1Q86Y37 369 aa13.77□□□□□ -0.21
CAPN1-227ENST00000533909 GPR161Q8N6U8 529 aaKnown RBP13.77□□□□□ -0.21
CAPN1-227ENST00000533909 ZNF366Q8N895 744 aa13.77□□□□□ -0.21
CAPN1-227ENST00000533909 OR8K1Q8NGG5 319 aa13.77□□□□□ -0.21
CAPN1-227ENST00000533909 RLN3Q8WXF3 142 aa13.77□□□□□ -0.21
CAPN1-227ENST00000533909 SIPA1Q96FS4 1042 aa13.77□□□□□ -0.21
CAPN1-227ENST00000533909 LOXL4Q96JB6 756 aa13.77□□□□□ -0.21
CAPN1-227ENST00000533909 MRGPRX1Q96LB2 322 aa13.77□□□□□ -0.21
CAPN1-227ENST00000533909 ZYG11BQ9C0D3 744 aa13.77□□□□□ -0.21
CAPN1-227ENST00000533909 FBRSQ9HAH7 460 aa13.77□□□□□ -0.21
CAPN1-227ENST00000533909 ANLNQ9NQW6 1124 aa13.77□□□□□ -0.21
CAPN1-227ENST00000533909 MPP6Q9NZW5 540 aa13.77□□□□□ -0.21
CAPN1-227ENST00000533909 OR12D3Q9UGF7 316 aa13.77□□□□□ -0.21
CAPN1-227ENST00000533909 USP18Q9UMW8 372 aa13.77□□□□□ -0.21
CAPN1-227ENST00000533909 CYP8B1Q9UNU6 501 aa13.77□□□□□ -0.21
CAPN1-227ENST00000533909 ERVW-1Q9UQF0 538 aa13.77□□□□□ -0.21
CAPN1-227ENST00000533909 NDUFS2O75306 463 aa13.76□□□□□ -0.21
CAPN1-227ENST00000533909 CNTN5O94779 1100 aa13.76□□□□□ -0.21
CAPN1-227ENST00000533909 PLEKP08567 350 aaPredicted RBP13.76□□□□□ -0.21
CAPN1-227ENST00000533909 MZF1P28698 734 aaPredicted RBP13.76□□□□□ -0.21
CAPN1-227ENST00000533909 P2RY2P41231 377 aa13.76□□□□□ -0.21
CAPN1-227ENST00000533909 DHPSP49366 369 aaPredicted RBP13.76□□□□□ -0.21
CAPN1-227ENST00000533909 NUMBP49757 651 aa13.76□□□□□ -0.21
CAPN1-227ENST00000533909 IRAK1P51617 712 aa13.76□□□□□ -0.21
CAPN1-227ENST00000533909 KRT83P78385 493 aa13.76□□□□□ -0.21
CAPN1-227ENST00000533909 PTPRNQ16849 979 aa13.76□□□□□ -0.21
CAPN1-227ENST00000533909 PLK5Q496M5 336 aa13.76□□□□□ -0.21
CAPN1-227ENST00000533909 C5orf22Q49AR2 442 aa13.76□□□□□ -0.21
CAPN1-227ENST00000533909 PPP1R15BQ5SWA1 713 aa13.76□□□□□ -0.21
CAPN1-227ENST00000533909 CCDC122Q5T0U0 273 aa13.76□□□□□ -0.21
CAPN1-227ENST00000533909 PLEKHA7Q6IQ23 1121 aa13.76□□□□□ -0.21
CAPN1-227ENST00000533909 CXorf57Q6NSI4 855 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms