RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 YIPF2Q9BWQ6 316 aa7.15□□□□□ -1.26
CTNND1-236ENST00000533667 MYLK2Q9H1R3 596 aa7.15□□□□□ -1.26
CTNND1-236ENST00000533667 A1CFQ9NQ94 594 aaKnown RBP7.15□□□□□ -1.26
CTNND1-236ENST00000533667 ATP6V1HQ9UI12 483 aa7.15□□□□□ -1.26
CTNND1-236ENST00000533667 ATPIF1Q9UII2 106 aa7.15□□□□□ -1.26
CTNND1-236ENST00000533667 PCDHB5Q9Y5E4 795 aa7.15□□□□□ -1.26
CTNND1-236ENST00000533667 TNPO3Q9Y5L0 923 aaKnown RBP7.15□□□□□ -1.26
CTNND1-236ENST00000533667 RBM47A0AV96 593 aaKnown RBP7.15□□□□□ -1.27
CTNND1-236ENST00000533667 H3BRB1 525 aa7.15□□□□□ -1.27
CTNND1-236ENST00000533667 CXCL11O14625 94 aa7.15□□□□□ -1.27
CTNND1-236ENST00000533667 ATP6V1G1O75348 118 aa7.15□□□□□ -1.27
CTNND1-236ENST00000533667 MAP3K6O95382 1288 aa7.15□□□□□ -1.27
CTNND1-236ENST00000533667 FAM153BP0C7A2 387 aa7.15□□□□□ -1.27
CTNND1-236ENST00000533667 PABPC1P11940 636 aaKnown RBP7.15□□□□□ -1.27
CTNND1-236ENST00000533667 SLC2A4P14672 509 aa7.15□□□□□ -1.27
CTNND1-236ENST00000533667 HALP42357 657 aa7.15□□□□□ -1.27
CTNND1-236ENST00000533667 ITGA1P56199 1179 aa7.15□□□□□ -1.27
CTNND1-236ENST00000533667 TBX4P57082 545 aa7.15□□□□□ -1.27
CTNND1-236ENST00000533667 ALDH6A1Q02252 535 aaKnown RBP7.15□□□□□ -1.27
CTNND1-236ENST00000533667 TOP3AQ13472 1001 aaPredicted RBP7.15□□□□□ -1.27
CTNND1-236ENST00000533667 PCBP1Q15365 356 aaKnown RBP eCLIP7.15□□□□□ -1.274e-9■■■□□ 19
CTNND1-236ENST00000533667 FAM153CQ494X1 144 aa7.15□□□□□ -1.27
CTNND1-236ENST00000533667 PLEKHA7Q6IQ23 1121 aa7.15□□□□□ -1.27
CTNND1-236ENST00000533667 ARCQ7LC44 396 aa7.15□□□□□ -1.27
CTNND1-236ENST00000533667 CARNMT1Q8N4J0 409 aa7.15□□□□□ -1.27
CTNND1-236ENST00000533667 PANX3Q96QZ0 392 aa7.15□□□□□ -1.27
CTNND1-236ENST00000533667 TUT1Q9H6E5 874 aaKnown RBP7.15□□□□□ -1.27
CTNND1-236ENST00000533667 ADARB2Q9NS39 739 aaKnown RBP7.15□□□□□ -1.27
CTNND1-236ENST00000533667 DNPEPQ9ULA0 475 aa7.15□□□□□ -1.27
CTNND1-236ENST00000533667 TMEM191CA6NGB0 347 aa7.15□□□□□ -1.27
CTNND1-236ENST00000533667 DDTLA6NHG4 134 aaPredicted RBP7.15□□□□□ -1.27
CTNND1-236ENST00000533667 CCDC154A6NI56 674 aa7.15□□□□□ -1.27
CTNND1-236ENST00000533667 SIGLEC16A6NMB1 481 aa7.15□□□□□ -1.27
CTNND1-236ENST00000533667 FAM86B1E9PN63 330 aa7.15□□□□□ -1.27
CTNND1-236ENST00000533667 ADGRB1O14514 1584 aa7.15□□□□□ -1.27
CTNND1-236ENST00000533667 FGF10O15520 208 aaPredicted RBP7.15□□□□□ -1.27
CTNND1-236ENST00000533667 NPM3O75607 178 aaKnown RBP7.15□□□□□ -1.27
CTNND1-236ENST00000533667 VTNP04004 478 aa7.15□□□□□ -1.27
CTNND1-236ENST00000533667 URODP06132 367 aa7.15□□□□□ -1.27
CTNND1-236ENST00000533667 NUDT17P0C025 328 aa7.15□□□□□ -1.27
CTNND1-236ENST00000533667 FAM86B2P0C5J1 330 aa7.15□□□□□ -1.27
CTNND1-236ENST00000533667 GYS1P13807 737 aa7.15□□□□□ -1.27
CTNND1-236ENST00000533667 ETS1P14921 441 aa7.15□□□□□ -1.27
CTNND1-236ENST00000533667 MGAT1P26572 445 aa7.15□□□□□ -1.27
CTNND1-236ENST00000533667 SSTR1P30872 391 aa7.15□□□□□ -1.27
CTNND1-236ENST00000533667 MAGEA10P43363 369 aaPredicted RBP7.15□□□□□ -1.27
CTNND1-236ENST00000533667 RPL14P50914 215 aaKnown RBP7.15□□□□□ -1.27
CTNND1-236ENST00000533667 IFI35P80217 286 aaPredicted RBP7.15□□□□□ -1.27
CTNND1-236ENST00000533667 IL5RAQ01344 420 aa7.15□□□□□ -1.27
CTNND1-236ENST00000533667 RIPOR1Q6ZS17 1223 aa7.15□□□□□ -1.27
CTNND1-236ENST00000533667 ZNF438Q7Z4V0 828 aa7.15□□□□□ -1.27
CTNND1-236ENST00000533667 PTAR1Q7Z6K3 402 aaPredicted RBP7.15□□□□□ -1.27
CTNND1-236ENST00000533667 FBXO16Q8IX29 292 aaPredicted RBP7.15□□□□□ -1.27
CTNND1-236ENST00000533667 FUKQ8N0W3 1084 aa7.15□□□□□ -1.27
CTNND1-236ENST00000533667 PGBD3Q8N328 593 aa7.15□□□□□ -1.27
CTNND1-236ENST00000533667 TMEM132CQ8N3T6 1108 aa7.15□□□□□ -1.27
CTNND1-236ENST00000533667 C19orf18Q8NEA5 215 aa7.15□□□□□ -1.27
CTNND1-236ENST00000533667 REPS2Q8NFH8 660 aa7.15□□□□□ -1.27
CTNND1-236ENST00000533667 ZKSCAN4Q969J2 545 aaPredicted RBP7.15□□□□□ -1.27
CTNND1-236ENST00000533667 CPB2Q96IY4 423 aa7.15□□□□□ -1.27
CTNND1-236ENST00000533667 APOL2Q9BQE5 337 aa7.15□□□□□ -1.27
CTNND1-236ENST00000533667 IL22Q9GZX6 179 aa7.15□□□□□ -1.27
CTNND1-236ENST00000533667 SPATC1LQ9H0A9 340 aa7.15□□□□□ -1.27
CTNND1-236ENST00000533667 ADPRHL2Q9NX46 363 aa7.15□□□□□ -1.27
CTNND1-236ENST00000533667 RPS6KB2Q9UBS0 482 aa7.15□□□□□ -1.27
CTNND1-236ENST00000533667 IPPQ9Y573 584 aa7.15□□□□□ -1.27
CTNND1-236ENST00000533667 COL3A1P02461 1466 aaPredicted RBP7.14□□□□□ -1.27
CTNND1-236ENST00000533667 UMODL1Q5DID0 1318 aa7.14□□□□□ -1.27
CTNND1-236ENST00000533667 ZNF862O60290 1169 aa7.14□□□□□ -1.27
CTNND1-236ENST00000533667 CBFA2T3O75081 653 aa7.14□□□□□ -1.27
CTNND1-236ENST00000533667 CPSF4O95639 269 aaKnown RBP7.14□□□□□ -1.27
CTNND1-236ENST00000533667 RAG1P15918 1043 aa7.14□□□□□ -1.27
CTNND1-236ENST00000533667 EPB42P16452 691 aa7.14□□□□□ -1.27
CTNND1-236ENST00000533667 HOXB6P17509 224 aaKnown RBP7.14□□□□□ -1.27
CTNND1-236ENST00000533667 KDELR1P24390 212 aa7.14□□□□□ -1.27
CTNND1-236ENST00000533667 MIPP30301 263 aa7.14□□□□□ -1.27
CTNND1-236ENST00000533667 SLC16A1P53985 500 aa7.14□□□□□ -1.27
CTNND1-236ENST00000533667 CSE1LP55060 971 aaKnown RBP7.14□□□□□ -1.27
CTNND1-236ENST00000533667 ADARP55265 1226 aaKnown RBP7.14□□□□□ -1.27
CTNND1-236ENST00000533667 HUNKP57058 714 aa7.14□□□□□ -1.27
CTNND1-236ENST00000533667 FAAP100Q0VG06 881 aa7.14□□□□□ -1.27
CTNND1-236ENST00000533667 CWF19L1Q69YN2 538 aaKnown RBP7.14□□□□□ -1.27
CTNND1-236ENST00000533667 OVOS1Q6IE37 1185 aa7.14□□□□□ -1.27
CTNND1-236ENST00000533667 NET1Q7Z628 596 aaPredicted RBP7.14□□□□□ -1.27
CTNND1-236ENST00000533667 KRT73Q86Y46 540 aa7.14□□□□□ -1.27
CTNND1-236ENST00000533667 LRRC49Q8IUZ0 686 aa7.14□□□□□ -1.27
CTNND1-236ENST00000533667 CDK20Q8IZL9 346 aa7.14□□□□□ -1.27
CTNND1-236ENST00000533667 DHRSXQ8N5I4 330 aa7.14□□□□□ -1.27
CTNND1-236ENST00000533667 OSBPL10Q9BXB5 764 aa7.14□□□□□ -1.27
CTNND1-236ENST00000533667 LRRC19Q9H756 370 aa7.14□□□□□ -1.27
CTNND1-236ENST00000533667 MIEF1Q9NQG6 463 aa7.14□□□□□ -1.27
CTNND1-236ENST00000533667 CIDEBQ9UHD4 219 aa7.14□□□□□ -1.27
CTNND1-236ENST00000533667 CORO1CQ9ULV4 474 aaPredicted RBP7.14□□□□□ -1.27
CTNND1-236ENST00000533667 KIF20BQ96Q89 1820 aa7.14□□□□□ -1.27
CTNND1-236ENST00000533667 VWDEQ8N2E2 1590 aa7.14□□□□□ -1.27
CTNND1-236ENST00000533667 CYP3A7-CYP3A51PA0A087WV96 503 aa7.14□□□□□ -1.27
CTNND1-236ENST00000533667 CENPXA8MT69 81 aa7.14□□□□□ -1.27
CTNND1-236ENST00000533667 ABLIM1O14639 778 aa7.14□□□□□ -1.27
CTNND1-236ENST00000533667 RGS14O43566 566 aa7.14□□□□□ -1.27
CTNND1-236ENST00000533667 SNX3O60493 162 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms