RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 A0A1B0GVM2 712 aa15.94■□□□□ 0.14
CPSF1-211ENST00000533492 TARSL2A2RTX5 802 aaKnown RBP15.94■□□□□ 0.14
CPSF1-211ENST00000533492 TCAF2A6NFQ2 919 aa15.94■□□□□ 0.14
CPSF1-211ENST00000533492 UPK3BL1B0FP48 263 aa15.94■□□□□ 0.14
CPSF1-211ENST00000533492 UPK3BL2E5RIL1 263 aa15.94■□□□□ 0.14
CPSF1-211ENST00000533492 SIN3BO75182 1162 aa15.94■□□□□ 0.14
CPSF1-211ENST00000533492 SEMA4FO95754 770 aa15.94■□□□□ 0.14
CPSF1-211ENST00000533492 UCHL3P15374 230 aa15.94■□□□□ 0.14
CPSF1-211ENST00000533492 MATKP42679 507 aa15.94■□□□□ 0.14
CPSF1-211ENST00000533492 CTSOP43234 321 aaPredicted RBP15.94■□□□□ 0.14
CPSF1-211ENST00000533492 OXCT1P55809 520 aa15.94■□□□□ 0.14
CPSF1-211ENST00000533492 SHC2P98077 582 aa15.94■□□□□ 0.14
CPSF1-211ENST00000533492 FOXC1Q12948 553 aa15.94■□□□□ 0.14
CPSF1-211ENST00000533492 TAF3Q5VWG9 929 aa15.94■□□□□ 0.14
CPSF1-211ENST00000533492 FBXL22Q6P050 247 aa15.94■□□□□ 0.14
CPSF1-211ENST00000533492 LRSAM1Q6UWE0 723 aa15.94■□□□□ 0.14
CPSF1-211ENST00000533492 SND1Q7KZF4 910 aaKnown RBP eCLIP15.94■□□□□ 0.14
CPSF1-211ENST00000533492 ERICH1Q86X53 443 aa15.94■□□□□ 0.14
CPSF1-211ENST00000533492 APCDD1Q8J025 514 aa15.94■□□□□ 0.14
CPSF1-211ENST00000533492 CCAR2Q8N163 923 aaKnown RBP15.94■□□□□ 0.14
CPSF1-211ENST00000533492 MSANTD4Q8NCY6 345 aa15.94■□□□□ 0.14
CPSF1-211ENST00000533492 ZNF397Q8NF99 534 aaPredicted RBP15.94■□□□□ 0.14
CPSF1-211ENST00000533492 C18orf8Q96DM3 657 aa15.94■□□□□ 0.14
CPSF1-211ENST00000533492 RPL10LQ96L21 214 aaKnown RBP15.94■□□□□ 0.14
CPSF1-211ENST00000533492 MRGPRX3Q96LB0 322 aa15.94■□□□□ 0.14
CPSF1-211ENST00000533492 PRMT1Q99873 361 aaKnown RBP15.94■□□□□ 0.14
CPSF1-211ENST00000533492 STK33Q9BYT3 514 aa15.94■□□□□ 0.14
CPSF1-211ENST00000533492 RSPH9Q9H1X1 276 aaPredicted RBP15.94■□□□□ 0.14
CPSF1-211ENST00000533492 VPS16Q9H269 839 aa15.94■□□□□ 0.14
CPSF1-211ENST00000533492 C6orf106Q9H6K1 298 aaPredicted RBP15.94■□□□□ 0.14
CPSF1-211ENST00000533492 SGK2Q9HBY8 427 aa15.94■□□□□ 0.14
CPSF1-211ENST00000533492 DNAAF2Q9NVR5 837 aaKnown RBP15.94■□□□□ 0.14
CPSF1-211ENST00000533492 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.94■□□□□ 0.14
CPSF1-211ENST00000533492 STAP1Q9ULZ2 295 aa15.94■□□□□ 0.14
CPSF1-211ENST00000533492 NUMA1Q14980 2115 aa15.94■□□□□ 0.14
CPSF1-211ENST00000533492 CACNA1EQ15878 2313 aa15.93■□□□□ 0.14
CPSF1-211ENST00000533492 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.93■□□□□ 0.14
CPSF1-211ENST00000533492 EDDM13A0A1B0GTR0 161 aa15.93■□□□□ 0.14
CPSF1-211ENST00000533492 TTC34A8MYJ7 566 aa15.93■□□□□ 0.14
CPSF1-211ENST00000533492 GOLGA6L22H0YM25 854 aa15.93■□□□□ 0.14
CPSF1-211ENST00000533492 C7P10643 843 aa15.93■□□□□ 0.14
CPSF1-211ENST00000533492 PDGFRAP16234 1089 aa15.93■□□□□ 0.14
CPSF1-211ENST00000533492 SULT2A1Q06520 285 aa15.93■□□□□ 0.14
CPSF1-211ENST00000533492 GRIK2Q13002 908 aa15.93■□□□□ 0.14
CPSF1-211ENST00000533492 SLC14A1Q13336 389 aa15.93■□□□□ 0.14
CPSF1-211ENST00000533492 ZNF177Q13360 481 aaPredicted RBP15.93■□□□□ 0.14
CPSF1-211ENST00000533492 AUHQ13825 339 aaKnown RBP15.93■□□□□ 0.14
CPSF1-211ENST00000533492 CIR1Q86X95 450 aaPredicted RBP15.93■□□□□ 0.14
CPSF1-211ENST00000533492 NAA15Q9BXJ9 866 aaKnown RBP15.93■□□□□ 0.14
CPSF1-211ENST00000533492 SIK2Q9H0K1 926 aa15.93■□□□□ 0.14
CPSF1-211ENST00000533492 WDCPQ9H6R7 721 aa15.93■□□□□ 0.14
CPSF1-211ENST00000533492 FBXL12Q9NXK8 326 aa15.93■□□□□ 0.14
CPSF1-211ENST00000533492 SLCO3A1Q9UIG8 710 aa15.93■□□□□ 0.14
CPSF1-211ENST00000533492 VANGL2Q9ULK5 521 aa15.93■□□□□ 0.14
CPSF1-211ENST00000533492 PCDH15Q96QU1 1955 aa15.93■□□□□ 0.14
CPSF1-211ENST00000533492 MUC22E2RYF6 1773 aaPredicted RBP15.92■□□□□ 0.14
CPSF1-211ENST00000533492 PAGE1O75459 146 aa15.92■□□□□ 0.14
CPSF1-211ENST00000533492 FSBPO95073 299 aa15.92■□□□□ 0.14
CPSF1-211ENST00000533492 F9P00740 461 aa15.92■□□□□ 0.14
CPSF1-211ENST00000533492 MZF1P28698 734 aaPredicted RBP15.92■□□□□ 0.14
CPSF1-211ENST00000533492 CDH5P33151 784 aaPredicted RBP15.92■□□□□ 0.14
CPSF1-211ENST00000533492 RDXP35241 583 aaKnown RBP15.92■□□□□ 0.14
CPSF1-211ENST00000533492 NUMBP49757 651 aa15.92■□□□□ 0.14
CPSF1-211ENST00000533492 SULT1E1P49888 294 aa15.92■□□□□ 0.14
CPSF1-211ENST00000533492 ARID5BQ14865 1188 aa15.92■□□□□ 0.14
CPSF1-211ENST00000533492 FKBP15Q5T1M5 1219 aa15.92■□□□□ 0.14
CPSF1-211ENST00000533492 C9orf64Q5T6V5 341 aa15.92■□□□□ 0.14
CPSF1-211ENST00000533492 FAM102AQ5T9C2 384 aaPredicted RBP15.92■□□□□ 0.14
CPSF1-211ENST00000533492 SASS6Q6UVJ0 657 aa15.92■□□□□ 0.14
CPSF1-211ENST00000533492 USP30Q70CQ3 517 aa15.92■□□□□ 0.14
CPSF1-211ENST00000533492 PIP4P1Q86T03 277 aa15.92■□□□□ 0.14
CPSF1-211ENST00000533492 MMAAQ8IVH4 418 aaKnown RBP15.92■□□□□ 0.14
CPSF1-211ENST00000533492 IGSF8Q969P0 613 aa15.92■□□□□ 0.14
CPSF1-211ENST00000533492 NPY6RQ99463 290 aa15.92■□□□□ 0.14
CPSF1-211ENST00000533492 OMDQ99983 421 aa15.92■□□□□ 0.14
CPSF1-211ENST00000533492 PABPC3Q9H361 631 aaKnown RBP15.92■□□□□ 0.14
CPSF1-211ENST00000533492 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.92■□□□□ 0.14
CPSF1-211ENST00000533492 PAXBP1Q9Y5B6 917 aa15.92■□□□□ 0.14
CPSF1-211ENST00000533492 PCDHB9Q9Y5E1 797 aa15.92■□□□□ 0.14
CPSF1-211ENST00000533492 HS3ST4Q9Y661 456 aa15.92■□□□□ 0.14
CPSF1-211ENST00000533492 SPAARA0A1B0GVQ0 90 aa15.91■□□□□ 0.14
CPSF1-211ENST00000533492 FAM170AA1A519 330 aa15.91■□□□□ 0.14
CPSF1-211ENST00000533492 FAM47DPA6NHR8 397 aa15.91■□□□□ 0.14
CPSF1-211ENST00000533492 F8VZ95 297 aa15.91■□□□□ 0.14
CPSF1-211ENST00000533492 MID1O15344 667 aa15.91■□□□□ 0.14
CPSF1-211ENST00000533492 LSM8O95777 96 aaKnown RBP15.91■□□□□ 0.14
CPSF1-211ENST00000533492 CD59P13987 128 aa15.91■□□□□ 0.14
CPSF1-211ENST00000533492 SLC8A1P32418 973 aa15.91■□□□□ 0.14
CPSF1-211ENST00000533492 GABRB2P47870 512 aa15.91■□□□□ 0.14
CPSF1-211ENST00000533492 STK19P49842 368 aaPredicted RBP15.91■□□□□ 0.14
CPSF1-211ENST00000533492 AFF3P51826 1226 aaKnown RBP15.91■□□□□ 0.14
CPSF1-211ENST00000533492 PLK1P53350 603 aa15.91■□□□□ 0.14
CPSF1-211ENST00000533492 SIM1P81133 766 aaPredicted RBP15.91■□□□□ 0.14
CPSF1-211ENST00000533492 CENPCQ03188 943 aa15.91■□□□□ 0.14
CPSF1-211ENST00000533492 DEUP1Q05D60 604 aa15.91■□□□□ 0.14
CPSF1-211ENST00000533492 HNRNPDQ14103 355 aaKnown RBP15.91■□□□□ 0.14
CPSF1-211ENST00000533492 KRT31Q15323 416 aa15.91■□□□□ 0.14
CPSF1-211ENST00000533492 TEAD4Q15561 434 aa15.91■□□□□ 0.14
CPSF1-211ENST00000533492 CST6Q15828 149 aa15.91■□□□□ 0.14
CPSF1-211ENST00000533492 BRMS1LQ5PSV4 323 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms