RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 RPP40O75818 363 aaKnown RBP21.08■□□□□ 0.97
CCS-208ENST00000533244 ATP5BP06576 529 aaKnown RBP21.08■□□□□ 0.97
CCS-208ENST00000533244 POLR2EP19388 210 aaKnown RBP21.08■□□□□ 0.97
CCS-208ENST00000533244 PRKCHP24723 683 aa21.08■□□□□ 0.97
CCS-208ENST00000533244 ADRA1BP35368 520 aa21.08■□□□□ 0.97
CCS-208ENST00000533244 CSKP41240 450 aa21.08■□□□□ 0.97
CCS-208ENST00000533244 PLK1P53350 603 aa21.08■□□□□ 0.97
CCS-208ENST00000533244 NRG1Q02297 640 aaPredicted RBP21.08■□□□□ 0.97
CCS-208ENST00000533244 SIM2Q14190 667 aaPredicted RBP21.08■□□□□ 0.97
CCS-208ENST00000533244 PLEKHG6Q3KR16 790 aa21.08■□□□□ 0.97
CCS-208ENST00000533244 CYB5D2Q8WUJ1 264 aa21.08■□□□□ 0.97
CCS-208ENST00000533244 NTAN1Q96AB6 310 aa21.08■□□□□ 0.97
CCS-208ENST00000533244 TRIM11Q96F44 468 aa21.08■□□□□ 0.97
CCS-208ENST00000533244 MYO19Q96H55 970 aa21.08■□□□□ 0.97
CCS-208ENST00000533244 RBSNQ9H1K0 784 aa21.08■□□□□ 0.97
CCS-208ENST00000533244 NENFQ9UMX5 172 aa21.08■□□□□ 0.97
CCS-208ENST00000533244 TBC1D30Q9Y2I9 924 aa21.08■□□□□ 0.97
CCS-208ENST00000533244 PLXND1Q9Y4D7 1925 aa21.08■□□□□ 0.97
CCS-208ENST00000533244 EP300Q09472 2414 aaPredicted RBP21.08■□□□□ 0.96
CCS-208ENST00000533244 DOCK4Q8N1I0 1966 aa21.07■□□□□ 0.96
CCS-208ENST00000533244 A0A087X0T9 212 aa21.07■□□□□ 0.96
CCS-208ENST00000533244 ANKRD62A6NC57 917 aa21.07■□□□□ 0.96
CCS-208ENST00000533244 ASLP04424 464 aa21.07■□□□□ 0.96
CCS-208ENST00000533244 FAM228BP0C875 321 aa21.07■□□□□ 0.96
CCS-208ENST00000533244 MYBL1P10243 752 aa21.07■□□□□ 0.96
CCS-208ENST00000533244 CDH4P55283 916 aa21.07■□□□□ 0.96
CCS-208ENST00000533244 OXCT1P55809 520 aa21.07■□□□□ 0.96
CCS-208ENST00000533244 SCAPQ12770 1279 aa21.07■□□□□ 0.96
CCS-208ENST00000533244 MANEALQ5VSG8 457 aa21.07■□□□□ 0.96
CCS-208ENST00000533244 DCUN1D2Q6PH85 259 aa21.07■□□□□ 0.96
CCS-208ENST00000533244 VPS36Q86VN1 386 aa21.07■□□□□ 0.96
CCS-208ENST00000533244 HMGB4Q8WW32 186 aa21.07■□□□□ 0.96
CCS-208ENST00000533244 ALG14Q96F25 216 aa21.07■□□□□ 0.96
CCS-208ENST00000533244 OSBPL2Q9H1P3 480 aa21.07■□□□□ 0.96
CCS-208ENST00000533244 CNOT8Q9UFF9 292 aaKnown RBP21.07■□□□□ 0.96
CCS-208ENST00000533244 ZNF292O60281 2723 aa21.07■□□□□ 0.96
CCS-208ENST00000533244 SPAG17Q6Q759 2223 aa21.06■□□□□ 0.96
CCS-208ENST00000533244 FRYLO94915 3013 aa21.06■□□□□ 0.96
CCS-208ENST00000533244 TMEM191CA6NGB0 347 aa21.06■□□□□ 0.96
CCS-208ENST00000533244 E9PAM4 449 aa21.06■□□□□ 0.96
CCS-208ENST00000533244 CNTN5O94779 1100 aa21.06■□□□□ 0.96
CCS-208ENST00000533244 C7P10643 843 aa21.06■□□□□ 0.96
CCS-208ENST00000533244 STARD3Q14849 445 aa21.06■□□□□ 0.96
CCS-208ENST00000533244 ARL13BQ3SXY8 428 aa21.06■□□□□ 0.96
CCS-208ENST00000533244 ALFQ53S48 1182 aa21.06■□□□□ 0.96
CCS-208ENST00000533244 SERPINA13PQ6UXR4 307 aa21.06■□□□□ 0.96
CCS-208ENST00000533244 LRRC31Q6UY01 552 aa21.06■□□□□ 0.96
CCS-208ENST00000533244 GAS2L3Q86XJ1 694 aa21.06■□□□□ 0.96
CCS-208ENST00000533244 APCDD1Q8J025 514 aa21.06■□□□□ 0.96
CCS-208ENST00000533244 CCDC185Q8N715 623 aa21.06■□□□□ 0.96
CCS-208ENST00000533244 KDM1BQ8NB78 822 aa21.06■□□□□ 0.96
CCS-208ENST00000533244 OR8K1Q8NGG5 319 aa21.06■□□□□ 0.96
CCS-208ENST00000533244 OR52K2Q8NGK3 314 aa21.06■□□□□ 0.96
CCS-208ENST00000533244 ZNF653Q96CK0 615 aa21.06■□□□□ 0.96
CCS-208ENST00000533244 MRGPRX3Q96LB0 322 aa21.06■□□□□ 0.96
CCS-208ENST00000533244 ZNF212Q9UDV6 495 aa21.06■□□□□ 0.96
CCS-208ENST00000533244 PLA2G4CQ9UP65 541 aa21.06■□□□□ 0.96
CCS-208ENST00000533244 OR51B4Q9Y5P0 310 aa21.06■□□□□ 0.96
CCS-208ENST00000533244 MFAP3LO75121 409 aa21.05■□□□□ 0.96
CCS-208ENST00000533244 MOCS3O95396 460 aa21.05■□□□□ 0.96
CCS-208ENST00000533244 NDUFV2P19404 249 aa21.05■□□□□ 0.96
CCS-208ENST00000533244 MZF1P28698 734 aaPredicted RBP21.05■□□□□ 0.96
CCS-208ENST00000533244 P2RY2P41231 377 aa21.05■□□□□ 0.96
CCS-208ENST00000533244 ZNF252P-AS1Q0IIN9 211 aa21.05■□□□□ 0.96
CCS-208ENST00000533244 TBX2Q13207 712 aaPredicted RBP21.05■□□□□ 0.96
CCS-208ENST00000533244 USP39Q53GS9 565 aaKnown RBP21.05■□□□□ 0.96
CCS-208ENST00000533244 LAIR1Q6GTX8 287 aa21.05■□□□□ 0.96
CCS-208ENST00000533244 FNIP1Q8TF40 1166 aa21.05■□□□□ 0.96
CCS-208ENST00000533244 ZC3H10Q96K80 434 aaKnown RBP21.05■□□□□ 0.96
CCS-208ENST00000533244 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.05■□□□□ 0.96
CCS-208ENST00000533244 BCCIPQ9P287 314 aaKnown RBP eCLIP21.05■□□□□ 0.96
CCS-208ENST00000533244 PPARGC1AQ9UBK2 798 aaKnown RBP21.05■□□□□ 0.96
CCS-208ENST00000533244 NEU3Q9UQ49 428 aa21.05■□□□□ 0.96
CCS-208ENST00000533244 SCINQ9Y6U3 715 aa21.05■□□□□ 0.96
CCS-208ENST00000533244 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.04■□□□□ 0.96
CCS-208ENST00000533244 ZNF177Q13360 481 aaPredicted RBP21.04■□□□□ 0.96
CCS-208ENST00000533244 CAMK2GQ13555 558 aaPredicted RBP21.04■□□□□ 0.96
CCS-208ENST00000533244 FNDC3BQ53EP0 1204 aaKnown RBP21.04■□□□□ 0.96
CCS-208ENST00000533244 PRR23BQ6ZRT6 265 aa21.04■□□□□ 0.96
CCS-208ENST00000533244 CEP68Q76N32 757 aa21.04■□□□□ 0.96
CCS-208ENST00000533244 TMC6Q7Z403 805 aa21.04■□□□□ 0.96
CCS-208ENST00000533244 RUBCNQ92622 972 aa21.04■□□□□ 0.96
CCS-208ENST00000533244 MRGPRX1Q96LB2 322 aa21.04■□□□□ 0.96
CCS-208ENST00000533244 ABHD10Q9NUJ1 306 aa21.04■□□□□ 0.96
CCS-208ENST00000533244 DCLK1O15075 740 aa21.04■□□□□ 0.96
CCS-208ENST00000533244 EPHX1P07099 455 aa21.04■□□□□ 0.96
CCS-208ENST00000533244 SRPRAP08240 638 aaKnown RBP21.04■□□□□ 0.96
CCS-208ENST00000533244 HLA-EP13747 358 aa21.04■□□□□ 0.96
CCS-208ENST00000533244 CTSOP43234 321 aaPredicted RBP21.04■□□□□ 0.96
CCS-208ENST00000533244 COPAP53621 1224 aa21.04■□□□□ 0.96
CCS-208ENST00000533244 AIF1P55008 147 aa21.04■□□□□ 0.96
CCS-208ENST00000533244 MAPK8IP2Q13387 824 aaPredicted RBP21.04■□□□□ 0.96
CCS-208ENST00000533244 ASTE1Q2TB18 679 aaPredicted RBP21.04■□□□□ 0.96
CCS-208ENST00000533244 MAP7D1Q3KQU3 841 aa21.04■□□□□ 0.96
CCS-208ENST00000533244 PLK5Q496M5 336 aa21.04■□□□□ 0.96
CCS-208ENST00000533244 ALKBH5Q6P6C2 394 aaKnown RBP21.04■□□□□ 0.96
CCS-208ENST00000533244 SETD3Q86TU7 594 aaPredicted RBP21.04■□□□□ 0.96
CCS-208ENST00000533244 KBTBD6Q86V97 674 aa21.04■□□□□ 0.96
CCS-208ENST00000533244 C11orf74Q86VG3 221 aa21.04■□□□□ 0.96
CCS-208ENST00000533244 FAM160A2Q8N612 972 aaPredicted RBP21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms