RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 ADGRA3Q8IWK6 1321 aa15.64■□□□□ 0.09
PCDHA3-202ENST00000532566 UBDO15205 165 aa15.63■□□□□ 0.09
PCDHA3-202ENST00000532566 TPST1O60507 370 aa15.63■□□□□ 0.09
PCDHA3-202ENST00000532566 ENDOD1O94919 500 aa15.63■□□□□ 0.09
PCDHA3-202ENST00000532566 UNGP13051 313 aaPredicted RBP15.63■□□□□ 0.09
PCDHA3-202ENST00000532566 PTGIRP43119 386 aa15.63■□□□□ 0.09
PCDHA3-202ENST00000532566 HSPA13P48723 471 aa15.63■□□□□ 0.09
PCDHA3-202ENST00000532566 ILF2Q12905 390 aaKnown RBP15.63■□□□□ 0.09
PCDHA3-202ENST00000532566 GTF2H3Q13889 308 aa15.63■□□□□ 0.09
PCDHA3-202ENST00000532566 C9orf57Q5W0N0 161 aa15.63■□□□□ 0.09
PCDHA3-202ENST00000532566 RPTORQ8N122 1335 aa15.63■□□□□ 0.09
PCDHA3-202ENST00000532566 ACMSDQ8TDX5 336 aa15.63■□□□□ 0.09
PCDHA3-202ENST00000532566 PTCH2Q9Y6C5 1203 aa15.63■□□□□ 0.09
PCDHA3-202ENST00000532566 NCF1BA6NI72 391 aaPredicted RBP15.63■□□□□ 0.09
PCDHA3-202ENST00000532566 NCF1CA8MVU1 366 aaPredicted RBP15.63■□□□□ 0.09
PCDHA3-202ENST00000532566 RTN3O95197 1032 aaPredicted RBP15.63■□□□□ 0.09
PCDHA3-202ENST00000532566 NCF1P14598 390 aaPredicted RBP15.63■□□□□ 0.09
PCDHA3-202ENST00000532566 DARSP14868 501 aaKnown RBP15.63■□□□□ 0.09
PCDHA3-202ENST00000532566 ITGALP20701 1170 aa15.63■□□□□ 0.09
PCDHA3-202ENST00000532566 CSE1LP55060 971 aaKnown RBP15.63■□□□□ 0.09
PCDHA3-202ENST00000532566 BST1Q10588 318 aa15.63■□□□□ 0.09
PCDHA3-202ENST00000532566 AGKQ53H12 422 aa15.63■□□□□ 0.09
PCDHA3-202ENST00000532566 STRADAQ7RTN6 431 aa15.63■□□□□ 0.09
PCDHA3-202ENST00000532566 CARNMT1Q8N4J0 409 aa15.63■□□□□ 0.09
PCDHA3-202ENST00000532566 PRCCQ92733 491 aaPredicted RBP15.63■□□□□ 0.09
PCDHA3-202ENST00000532566 RBBP8Q99708 897 aa15.63■□□□□ 0.09
PCDHA3-202ENST00000532566 B3GNT5Q9BYG0 378 aa15.63■□□□□ 0.09
PCDHA3-202ENST00000532566 PDP2Q9P2J9 529 aa15.63■□□□□ 0.09
PCDHA3-202ENST00000532566 MORF4L1Q9UBU8 362 aa15.63■□□□□ 0.09
PCDHA3-202ENST00000532566 SMIM35A0A1B0GVV1 85 aa15.63■□□□□ 0.09
PCDHA3-202ENST00000532566 URODP06132 367 aa15.63■□□□□ 0.09
PCDHA3-202ENST00000532566 TOP6BLQ8N6T0 577 aa15.63■□□□□ 0.09
PCDHA3-202ENST00000532566 TSPAN18Q96SJ8 248 aa15.63■□□□□ 0.09
PCDHA3-202ENST00000532566 DUSP16Q9BY84 665 aa15.63■□□□□ 0.09
PCDHA3-202ENST00000532566 PDZD7Q9H5P4 517 aa15.63■□□□□ 0.09
PCDHA3-202ENST00000532566 CNGB3Q9NQW8 809 aa15.63■□□□□ 0.09
PCDHA3-202ENST00000532566 A0A1W2PPM1 405 aa15.63■□□□□ 0.09
PCDHA3-202ENST00000532566 PHGDHO43175 533 aaKnown RBP15.63■□□□□ 0.09
PCDHA3-202ENST00000532566 DAB1O75553 588 aa15.63■□□□□ 0.09
PCDHA3-202ENST00000532566 NFKB1P19838 968 aa15.63■□□□□ 0.09
PCDHA3-202ENST00000532566 NEPROQ6NW34 567 aa15.63■□□□□ 0.09
PCDHA3-202ENST00000532566 RNF168Q8IYW5 571 aaPredicted RBP15.63■□□□□ 0.09
PCDHA3-202ENST00000532566 PDGFDQ9GZP0 370 aaPredicted RBP15.63■□□□□ 0.09
PCDHA3-202ENST00000532566 AAASQ9NRG9 546 aa15.63■□□□□ 0.09
PCDHA3-202ENST00000532566 RGS18Q9NS28 235 aa15.63■□□□□ 0.09
PCDHA3-202ENST00000532566 DCXO43602 365 aa15.62■□□□□ 0.09
PCDHA3-202ENST00000532566 MT-CO1P00395 513 aa15.62■□□□□ 0.09
PCDHA3-202ENST00000532566 ABCG1P45844 678 aa15.62■□□□□ 0.09
PCDHA3-202ENST00000532566 UNC5AQ6ZN44 842 aa15.62■□□□□ 0.09
PCDHA3-202ENST00000532566 HS6ST3Q8IZP7 471 aa15.62■□□□□ 0.09
PCDHA3-202ENST00000532566 TFAP2BQ92481 460 aa15.62■□□□□ 0.09
PCDHA3-202ENST00000532566 ECSITQ9BQ95 431 aa15.62■□□□□ 0.09
PCDHA3-202ENST00000532566 WDR70Q9NW82 654 aa15.62■□□□□ 0.09
PCDHA3-202ENST00000532566 TUBGCP4Q9UGJ1 667 aa15.62■□□□□ 0.09
PCDHA3-202ENST00000532566 QPCTQ16769 361 aa15.62■□□□□ 0.09
PCDHA3-202ENST00000532566 PCID2Q5JVF3 399 aa15.62■□□□□ 0.09
PCDHA3-202ENST00000532566 SNX30Q5VWJ9 437 aa15.62■□□□□ 0.09
PCDHA3-202ENST00000532566 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.62■□□□□ 0.09
PCDHA3-202ENST00000532566 NUDT18Q6ZVK8 323 aa15.62■□□□□ 0.09
PCDHA3-202ENST00000532566 DDI1Q8WTU0 396 aa15.62■□□□□ 0.09
PCDHA3-202ENST00000532566 LRRN4Q8WUT4 740 aa15.62■□□□□ 0.09
PCDHA3-202ENST00000532566 CYGBQ8WWM9 190 aa15.62■□□□□ 0.09
PCDHA3-202ENST00000532566 CATSPER2Q96P56 530 aa15.62■□□□□ 0.09
PCDHA3-202ENST00000532566 MTIF3Q9H2K0 278 aaKnown RBP15.62■□□□□ 0.09
PCDHA3-202ENST00000532566 ATP13A1Q9HD20 1204 aa15.62■□□□□ 0.09
PCDHA3-202ENST00000532566 ST3GAL5Q9UNP4 418 aa15.62■□□□□ 0.09
PCDHA3-202ENST00000532566 CLDN5O00501 218 aa15.62■□□□□ 0.09
PCDHA3-202ENST00000532566 ONECUT3O60422 494 aaPredicted RBP15.62■□□□□ 0.09
PCDHA3-202ENST00000532566 AVILO75366 819 aa15.62■□□□□ 0.09
PCDHA3-202ENST00000532566 PGK1P00558 417 aa15.62■□□□□ 0.09
PCDHA3-202ENST00000532566 RPL9P32969 192 aaKnown RBP15.62■□□□□ 0.09
PCDHA3-202ENST00000532566 HOXD13P35453 343 aa15.62■□□□□ 0.09
PCDHA3-202ENST00000532566 PEX5P50542 639 aa15.62■□□□□ 0.09
PCDHA3-202ENST00000532566 INHBEP58166 350 aa15.62■□□□□ 0.09
PCDHA3-202ENST00000532566 TMC7Q7Z402 723 aa15.62■□□□□ 0.09
PCDHA3-202ENST00000532566 STK32AQ8WU08 396 aa15.62■□□□□ 0.09
PCDHA3-202ENST00000532566 ADNPQ9H2P0 1102 aa15.62■□□□□ 0.09
PCDHA3-202ENST00000532566 MMADHCQ9H3L0 296 aaPredicted RBP15.62■□□□□ 0.09
PCDHA3-202ENST00000532566 MARCH2Q9P0N8 246 aa15.62■□□□□ 0.09
PCDHA3-202ENST00000532566 SMIM28A0A1B0GU29 152 aa15.61■□□□□ 0.09
PCDHA3-202ENST00000532566 EDF1O60869 148 aaKnown RBP15.61■□□□□ 0.09
PCDHA3-202ENST00000532566 PSMA4P25789 261 aaKnown RBP15.61■□□□□ 0.09
PCDHA3-202ENST00000532566 SLC25A52Q3SY17 297 aa15.61■□□□□ 0.09
PCDHA3-202ENST00000532566 MYO1HQ8N1T3 1032 aa15.61■□□□□ 0.09
PCDHA3-202ENST00000532566 CDHR5Q9HBB8 845 aa15.61■□□□□ 0.09
PCDHA3-202ENST00000532566 GRHL1Q9NZI5 618 aa15.61■□□□□ 0.09
PCDHA3-202ENST00000532566 MRPL42Q9Y6G3 142 aaKnown RBP15.61■□□□□ 0.09
PCDHA3-202ENST00000532566 ZNF536O15090 1300 aa15.61■□□□□ 0.09
PCDHA3-202ENST00000532566 CLUHO75153 1309 aa15.61■□□□□ 0.09
PCDHA3-202ENST00000532566 FAM237BA0A1B0GVD1 139 aa15.61■□□□□ 0.09
PCDHA3-202ENST00000532566 FAM95CA0A1B0GW59 222 aa15.61■□□□□ 0.09
PCDHA3-202ENST00000532566 MMP3P08254 477 aa15.61■□□□□ 0.09
PCDHA3-202ENST00000532566 DDX5P17844 614 aaKnown RBP15.61■□□□□ 0.09
PCDHA3-202ENST00000532566 CDH2P19022 906 aaPredicted RBP15.61■□□□□ 0.09
PCDHA3-202ENST00000532566 MBTD1Q05BQ5 628 aa15.61■□□□□ 0.09
PCDHA3-202ENST00000532566 SLC34A1Q06495 639 aa15.61■□□□□ 0.09
PCDHA3-202ENST00000532566 CYP1B1Q16678 543 aa15.61■□□□□ 0.09
PCDHA3-202ENST00000532566 IZUMO2Q6UXV1 221 aa15.61■□□□□ 0.09
PCDHA3-202ENST00000532566 FAM35AQ86V20 835 aa15.61■□□□□ 0.09
PCDHA3-202ENST00000532566 SLC4A11Q8NBS3 891 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms