RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 SLC6A14Q9UN76 642 aa17.79■□□□□ 0.44
PHRF1-204ENST00000532550 ERVW-1Q9UQF0 538 aa17.79■□□□□ 0.44
PHRF1-204ENST00000532550 TNRC6BQ9UPQ9 1833 aaKnown RBP17.79■□□□□ 0.44
PHRF1-204ENST00000532550 A0A1B0GVM2 712 aa17.78■□□□□ 0.44
PHRF1-204ENST00000532550 TCAF2A6NFQ2 919 aa17.78■□□□□ 0.44
PHRF1-204ENST00000532550 TM4SF5O14894 197 aa17.78■□□□□ 0.44
PHRF1-204ENST00000532550 EPHB6O15197 1021 aa17.78■□□□□ 0.44
PHRF1-204ENST00000532550 PAGE1O75459 146 aa17.78■□□□□ 0.44
PHRF1-204ENST00000532550 DNTTP04053 509 aa17.78■□□□□ 0.44
PHRF1-204ENST00000532550 SRPRAP08240 638 aaKnown RBP17.78■□□□□ 0.44
PHRF1-204ENST00000532550 ZNF18P17022 549 aa17.78■□□□□ 0.44
PHRF1-204ENST00000532550 KCNA4P22459 653 aa17.78■□□□□ 0.44
PHRF1-204ENST00000532550 NNMTP40261 264 aa17.78■□□□□ 0.44
PHRF1-204ENST00000532550 CXCR3P49682 368 aa17.78■□□□□ 0.44
PHRF1-204ENST00000532550 NOMO3P69849 1222 aa17.78■□□□□ 0.44
PHRF1-204ENST00000532550 ECT2LQ008S8 904 aa17.78■□□□□ 0.44
PHRF1-204ENST00000532550 ZBTB16Q05516 673 aa17.78■□□□□ 0.44
PHRF1-204ENST00000532550 DEUP1Q05D60 604 aa17.78■□□□□ 0.44
PHRF1-204ENST00000532550 GFPT1Q06210 699 aaPredicted RBP17.78■□□□□ 0.44
PHRF1-204ENST00000532550 PLEKHG6Q3KR16 790 aa17.78■□□□□ 0.44
PHRF1-204ENST00000532550 SLC25A52Q3SY17 297 aa17.78■□□□□ 0.44
PHRF1-204ENST00000532550 ANO6Q4KMQ2 910 aa17.78■□□□□ 0.44
PHRF1-204ENST00000532550 BRMS1LQ5PSV4 323 aa17.78■□□□□ 0.44
PHRF1-204ENST00000532550 APCDD1Q8J025 514 aa17.78■□□□□ 0.44
PHRF1-204ENST00000532550 CADM4Q8NFZ8 388 aa17.78■□□□□ 0.44
PHRF1-204ENST00000532550 SLC20A1Q8WUM9 679 aa17.78■□□□□ 0.44
PHRF1-204ENST00000532550 NT5C3BQ969T7 300 aa17.78■□□□□ 0.44
PHRF1-204ENST00000532550 PGAP3Q96FM1 320 aaPredicted RBP17.78■□□□□ 0.44
PHRF1-204ENST00000532550 ERGIC2Q96RQ1 377 aa17.78■□□□□ 0.44
PHRF1-204ENST00000532550 TKTL2Q9H0I9 626 aa17.78■□□□□ 0.44
PHRF1-204ENST00000532550 PIGVQ9NUD9 493 aa17.78■□□□□ 0.44
PHRF1-204ENST00000532550 VANGL2Q9ULK5 521 aa17.78■□□□□ 0.44
PHRF1-204ENST00000532550 HS3ST4Q9Y661 456 aa17.78■□□□□ 0.44
PHRF1-204ENST00000532550 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.77■□□□□ 0.44
PHRF1-204ENST00000532550 SMTNL1A8MU46 457 aa17.77■□□□□ 0.44
PHRF1-204ENST00000532550 MEI4A8MW99 385 aa17.77■□□□□ 0.44
PHRF1-204ENST00000532550 RNASEH1O60930 286 aaKnown RBP17.77■□□□□ 0.44
PHRF1-204ENST00000532550 IGLV3-19P01714 112 aa17.77■□□□□ 0.44
PHRF1-204ENST00000532550 CYP1A1P04798 512 aaPredicted RBP17.77■□□□□ 0.44
PHRF1-204ENST00000532550 SERPINF2P08697 491 aa17.77■□□□□ 0.44
PHRF1-204ENST00000532550 GNSP15586 552 aa17.77■□□□□ 0.44
PHRF1-204ENST00000532550 PDGFRAP16234 1089 aa17.77■□□□□ 0.44
PHRF1-204ENST00000532550 CHRNB2P17787 502 aa17.77■□□□□ 0.44
PHRF1-204ENST00000532550 ATXN3P54252 364 aaPredicted RBP17.77■□□□□ 0.44
PHRF1-204ENST00000532550 RPS14P62263 151 aaKnown RBP17.77■□□□□ 0.44
PHRF1-204ENST00000532550 SULT2A1Q06520 285 aa17.77■□□□□ 0.44
PHRF1-204ENST00000532550 ZNF177Q13360 481 aaPredicted RBP17.77■□□□□ 0.44
PHRF1-204ENST00000532550 HNRNPA1L2Q32P51 320 aaKnown RBP17.77■□□□□ 0.44
PHRF1-204ENST00000532550 CAVIN1Q6NZI2 390 aaKnown RBP17.77■□□□□ 0.44
PHRF1-204ENST00000532550 TRIM72Q6ZMU5 477 aa17.77■□□□□ 0.44
PHRF1-204ENST00000532550 FAM124AQ86V42 546 aa17.77■□□□□ 0.44
PHRF1-204ENST00000532550 CIR1Q86X95 450 aaPredicted RBP17.77■□□□□ 0.44
PHRF1-204ENST00000532550 IGSF8Q969P0 613 aa17.77■□□□□ 0.44
PHRF1-204ENST00000532550 MYO19Q96H55 970 aa17.77■□□□□ 0.44
PHRF1-204ENST00000532550 MRGPRX3Q96LB0 322 aa17.77■□□□□ 0.44
PHRF1-204ENST00000532550 TBCBQ99426 244 aa17.77■□□□□ 0.44
PHRF1-204ENST00000532550 MTG2Q9H4K7 406 aa17.77■□□□□ 0.44
PHRF1-204ENST00000532550 ARHGEF38Q9NXL2 777 aa17.77■□□□□ 0.44
PHRF1-204ENST00000532550 SUSD2Q9UGT4 822 aa17.77■□□□□ 0.44
PHRF1-204ENST00000532550 LAMA1P25391 3075 aa17.77■□□□□ 0.43
PHRF1-204ENST00000532550 TARSL2A2RTX5 802 aaKnown RBP17.76■□□□□ 0.43
PHRF1-204ENST00000532550 CDX4O14627 284 aaPredicted RBP17.76■□□□□ 0.43
PHRF1-204ENST00000532550 ADCY5O95622 1261 aa17.76■□□□□ 0.43
PHRF1-204ENST00000532550 ENGP17813 658 aa17.76■□□□□ 0.43
PHRF1-204ENST00000532550 TFE3P19532 575 aaPredicted RBP17.76■□□□□ 0.43
PHRF1-204ENST00000532550 MAOBP27338 520 aa17.76■□□□□ 0.43
PHRF1-204ENST00000532550 CTSOP43234 321 aaPredicted RBP17.76■□□□□ 0.43
PHRF1-204ENST00000532550 FMO1Q01740 532 aa17.76■□□□□ 0.43
PHRF1-204ENST00000532550 SFSWAPQ12872 951 aaKnown RBP17.76■□□□□ 0.43
PHRF1-204ENST00000532550 UAP1L1Q3KQV9 507 aa17.76■□□□□ 0.43
PHRF1-204ENST00000532550 TTC31Q49AM3 519 aaPredicted RBP17.76■□□□□ 0.43
PHRF1-204ENST00000532550 ACBD5Q5T8D3 534 aaPredicted RBP17.76■□□□□ 0.43
PHRF1-204ENST00000532550 ZNF776Q68DI1 518 aaPredicted RBP17.76■□□□□ 0.43
PHRF1-204ENST00000532550 LRRC31Q6UY01 552 aa17.76■□□□□ 0.43
PHRF1-204ENST00000532550 ARCQ7LC44 396 aa17.76■□□□□ 0.43
PHRF1-204ENST00000532550 C14orf80Q86SX3 495 aa17.76■□□□□ 0.43
PHRF1-204ENST00000532550 DHX40Q8IX18 779 aaKnown RBP17.76■□□□□ 0.43
PHRF1-204ENST00000532550 RPL10LQ96L21 214 aaKnown RBP17.76■□□□□ 0.43
PHRF1-204ENST00000532550 HSD3B7Q9H2F3 369 aa17.76■□□□□ 0.43
PHRF1-204ENST00000532550 SLCO3A1Q9UIG8 710 aa17.76■□□□□ 0.43
PHRF1-204ENST00000532550 TMEM59LQ9UK28 342 aa17.76■□□□□ 0.43
PHRF1-204ENST00000532550 NCKAP1Q9Y2A7 1128 aa17.76■□□□□ 0.43
PHRF1-204ENST00000532550 NCOR2Q9Y618 2525 aa17.76■□□□□ 0.43
PHRF1-204ENST00000532550 EDDM13A0A1B0GTR0 161 aa17.75■□□□□ 0.43
PHRF1-204ENST00000532550 METTL12A8MUP2 240 aa17.75■□□□□ 0.43
PHRF1-204ENST00000532550 TTC34A8MYJ7 566 aa17.75■□□□□ 0.43
PHRF1-204ENST00000532550 SIN3BO75182 1162 aa17.75■□□□□ 0.43
PHRF1-204ENST00000532550 CLDN11O75508 207 aa17.75■□□□□ 0.43
PHRF1-204ENST00000532550 SYPP08247 313 aa17.75■□□□□ 0.43
PHRF1-204ENST00000532550 C7P10643 843 aa17.75■□□□□ 0.43
PHRF1-204ENST00000532550 ATP1A3P13637 1013 aa17.75■□□□□ 0.43
PHRF1-204ENST00000532550 MMP8P22894 467 aa17.75■□□□□ 0.43
PHRF1-204ENST00000532550 MZF1P28698 734 aaPredicted RBP17.75■□□□□ 0.43
PHRF1-204ENST00000532550 FLT3P36888 993 aa17.75■□□□□ 0.43
PHRF1-204ENST00000532550 MAPK8P45983 427 aa17.75■□□□□ 0.43
PHRF1-204ENST00000532550 PLK1P53350 603 aa17.75■□□□□ 0.43
PHRF1-204ENST00000532550 CDH4P55283 916 aa17.75■□□□□ 0.43
PHRF1-204ENST00000532550 CENPCQ03188 943 aa17.75■□□□□ 0.43
PHRF1-204ENST00000532550 ARID5BQ14865 1188 aa17.75■□□□□ 0.43
PHRF1-204ENST00000532550 DCAF12L1Q5VU92 463 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms