RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 RNF225M0QZC1 329 aaPredicted RBP17.94■□□□□ 0.46
PKP3-208ENST00000531857 ZNF202O95125 648 aa17.94■□□□□ 0.46
PKP3-208ENST00000531857 ASLP04424 464 aa17.94■□□□□ 0.46
PKP3-208ENST00000531857 ITGAVP06756 1048 aa17.94■□□□□ 0.46
PKP3-208ENST00000531857 JUPP14923 745 aa17.94■□□□□ 0.46
PKP3-208ENST00000531857 ABCB4P21439 1286 aa17.94■□□□□ 0.46
PKP3-208ENST00000531857 CD38P28907 300 aa17.94■□□□□ 0.46
PKP3-208ENST00000531857 SLC8A1P32418 973 aa17.94■□□□□ 0.46
PKP3-208ENST00000531857 PRCPP42785 496 aa17.94■□□□□ 0.46
PKP3-208ENST00000531857 ABCG1P45844 678 aa17.94■□□□□ 0.46
PKP3-208ENST00000531857 YWHAEP62258 255 aaKnown RBP17.94■□□□□ 0.46
PKP3-208ENST00000531857 ARID5BQ14865 1188 aa17.94■□□□□ 0.46
PKP3-208ENST00000531857 PITRM1Q5JRX3 1037 aa17.94■□□□□ 0.46
PKP3-208ENST00000531857 TMEM270Q6UE05 265 aa17.94■□□□□ 0.46
PKP3-208ENST00000531857 AADATQ8N5Z0 425 aa17.94■□□□□ 0.46
PKP3-208ENST00000531857 EID2Q8N6I1 236 aa17.94■□□□□ 0.46
PKP3-208ENST00000531857 ZNF557Q8N988 423 aaPredicted RBP17.94■□□□□ 0.46
PKP3-208ENST00000531857 OR2T34Q8NGX1 318 aa17.94■□□□□ 0.46
PKP3-208ENST00000531857 OMDQ99983 421 aa17.94■□□□□ 0.46
PKP3-208ENST00000531857 ADAMTS1Q9UHI8 967 aa17.94■□□□□ 0.46
PKP3-208ENST00000531857 SLCO3A1Q9UIG8 710 aa17.94■□□□□ 0.46
PKP3-208ENST00000531857 HELZ2Q9BYK8 2649 aaKnown RBP17.94■□□□□ 0.46
PKP3-208ENST00000531857 GOLGA6L4A6NEF3 574 aa17.93■□□□□ 0.46
PKP3-208ENST00000531857 LRRC72A6NJI9 287 aa17.93■□□□□ 0.46
PKP3-208ENST00000531857 M0QYV0 167 aa17.93■□□□□ 0.46
PKP3-208ENST00000531857 TLX3O43711 291 aaPredicted RBP17.93■□□□□ 0.46
PKP3-208ENST00000531857 RFPL3O75679 317 aa17.93■□□□□ 0.46
PKP3-208ENST00000531857 ZIC2O95409 532 aaPredicted RBP17.93■□□□□ 0.46
PKP3-208ENST00000531857 PRB1P04280 392 aa17.93■□□□□ 0.46
PKP3-208ENST00000531857 PSMD8P48556 350 aa17.93■□□□□ 0.46
PKP3-208ENST00000531857 ACADVLP49748 655 aa17.93■□□□□ 0.46
PKP3-208ENST00000531857 PMS1P54277 932 aaKnown RBP17.93■□□□□ 0.46
PKP3-208ENST00000531857 CDH18Q13634 790 aa17.93■□□□□ 0.46
PKP3-208ENST00000531857 MS4A13Q5J8X5 152 aa17.93■□□□□ 0.46
PKP3-208ENST00000531857 ANKRD40Q6AI12 368 aa17.93■□□□□ 0.46
PKP3-208ENST00000531857 SLC35C1Q96A29 364 aa17.93■□□□□ 0.46
PKP3-208ENST00000531857 MIS12Q9H081 205 aa17.93■□□□□ 0.46
PKP3-208ENST00000531857 XPO7Q9UIA9 1087 aaKnown RBP17.93■□□□□ 0.46
PKP3-208ENST00000531857 FZD4Q9ULV1 537 aa17.93■□□□□ 0.46
PKP3-208ENST00000531857 TDRD6O60522 2096 aaKnown RBP17.93■□□□□ 0.46
PKP3-208ENST00000531857 A0A1W2PQ27 194 aa17.92■□□□□ 0.46
PKP3-208ENST00000531857 A0A1W2PQ64 194 aa17.92■□□□□ 0.46
PKP3-208ENST00000531857 TARSL2A2RTX5 802 aaKnown RBP17.92■□□□□ 0.46
PKP3-208ENST00000531857 SLC16A3O15427 465 aaKnown RBP17.92■□□□□ 0.46
PKP3-208ENST00000531857 SRPRAP08240 638 aaKnown RBP17.92■□□□□ 0.46
PKP3-208ENST00000531857 PAEPP09466 180 aa17.92■□□□□ 0.46
PKP3-208ENST00000531857 TBXAS1P24557 533 aaPredicted RBP17.92■□□□□ 0.46
PKP3-208ENST00000531857 BRD2P25440 801 aaKnown RBP17.92■□□□□ 0.46
PKP3-208ENST00000531857 NUMBP49757 651 aa17.92■□□□□ 0.46
PKP3-208ENST00000531857 CCR5P51681 352 aa17.92■□□□□ 0.46
PKP3-208ENST00000531857 ADPRHP54922 357 aa17.92■□□□□ 0.46
PKP3-208ENST00000531857 SEMG2Q02383 582 aa17.92■□□□□ 0.46
PKP3-208ENST00000531857 BNIP3Q12983 259 aa17.92■□□□□ 0.46
PKP3-208ENST00000531857 TARDBPQ13148 414 aaKnown RBP eCLIP17.92■□□□□ 0.46
PKP3-208ENST00000531857 PNOCQ13519 176 aa17.92■□□□□ 0.46
PKP3-208ENST00000531857 CNGA2Q16280 664 aa17.92■□□□□ 0.46
PKP3-208ENST00000531857 DCAF6Q58WW2 860 aa17.92■□□□□ 0.46
PKP3-208ENST00000531857 C6orf118Q5T5N4 469 aa17.92■□□□□ 0.46
PKP3-208ENST00000531857 CAVIN1Q6NZI2 390 aaKnown RBP17.92■□□□□ 0.46
PKP3-208ENST00000531857 APCDD1Q8J025 514 aa17.92■□□□□ 0.46
PKP3-208ENST00000531857 STK40Q8N2I9 435 aa17.92■□□□□ 0.46
PKP3-208ENST00000531857 KDM1BQ8NB78 822 aa17.92■□□□□ 0.46
PKP3-208ENST00000531857 ADAM32Q8TC27 787 aa17.92■□□□□ 0.46
PKP3-208ENST00000531857 GPT2Q8TD30 523 aa17.92■□□□□ 0.46
PKP3-208ENST00000531857 DQX1Q8TE96 717 aaKnown RBP17.92■□□□□ 0.46
PKP3-208ENST00000531857 TSC1Q92574 1164 aa17.92■□□□□ 0.46
PKP3-208ENST00000531857 PTPRN2Q92932 1015 aa17.92■□□□□ 0.46
PKP3-208ENST00000531857 KAT5Q92993 513 aa17.92■□□□□ 0.46
PKP3-208ENST00000531857 SKA1Q96BD8 255 aa17.92■□□□□ 0.46
PKP3-208ENST00000531857 NXPE2Q96DL1 559 aa17.92■□□□□ 0.46
PKP3-208ENST00000531857 SLC39A13Q96H72 371 aa17.92■□□□□ 0.46
PKP3-208ENST00000531857 SERAC1Q96JX3 654 aa17.92■□□□□ 0.46
PKP3-208ENST00000531857 RPL10LQ96L21 214 aaKnown RBP17.92■□□□□ 0.46
PKP3-208ENST00000531857 GDF3Q9NR23 364 aa17.92■□□□□ 0.46
PKP3-208ENST00000531857 NAALADL1Q9UQQ1 740 aa17.92■□□□□ 0.46
PKP3-208ENST00000531857 PCDHB4Q9Y5E5 795 aa17.92■□□□□ 0.46
PKP3-208ENST00000531857 ITIH6Q6UXX5 1313 aa17.92■□□□□ 0.46
PKP3-208ENST00000531857 PTPRQQ9UMZ3 2332 aa17.91■□□□□ 0.46
PKP3-208ENST00000531857 EDDM13A0A1B0GTR0 161 aa17.91■□□□□ 0.46
PKP3-208ENST00000531857 TYW5A2RUC4 315 aaKnown RBP17.91■□□□□ 0.46
PKP3-208ENST00000531857 TRIM49BA6NDI0 452 aa17.91■□□□□ 0.46
PKP3-208ENST00000531857 LUC7L3O95232 432 aaKnown RBP17.91■□□□□ 0.46
PKP3-208ENST00000531857 MOCS2O96007 188 aaPredicted RBP17.91■□□□□ 0.46
PKP3-208ENST00000531857 GOT1P17174 413 aa17.91■□□□□ 0.46
PKP3-208ENST00000531857 EPHA8P29322 1005 aaPredicted RBP17.91■□□□□ 0.46
PKP3-208ENST00000531857 HNF1BP35680 557 aa17.91■□□□□ 0.46
PKP3-208ENST00000531857 EIF2S3P41091 472 aaKnown RBP17.91■□□□□ 0.46
PKP3-208ENST00000531857 STK19P49842 368 aaPredicted RBP17.91■□□□□ 0.46
PKP3-208ENST00000531857 METAP1P53582 386 aa17.91■□□□□ 0.46
PKP3-208ENST00000531857 NXPH1P58417 271 aa17.91■□□□□ 0.46
PKP3-208ENST00000531857 PPP2CBP62714 309 aa17.91■□□□□ 0.46
PKP3-208ENST00000531857 PPP2CAP67775 309 aa17.91■□□□□ 0.46
PKP3-208ENST00000531857 ECT2LQ008S8 904 aa17.91■□□□□ 0.46
PKP3-208ENST00000531857 SFSWAPQ12872 951 aaKnown RBP17.91■□□□□ 0.46
PKP3-208ENST00000531857 HES3Q5TGS1 186 aa17.91■□□□□ 0.46
PKP3-208ENST00000531857 SND1Q7KZF4 910 aaKnown RBP eCLIP17.91■□□□□ 0.46
PKP3-208ENST00000531857 OR14C36Q8NHC7 312 aa17.91■□□□□ 0.46
PKP3-208ENST00000531857 UBL7Q96S82 380 aaPredicted RBP17.91■□□□□ 0.46
PKP3-208ENST00000531857 DDX50Q9BQ39 737 aaKnown RBP17.91■□□□□ 0.46
PKP3-208ENST00000531857 ARMCX3Q9UH62 379 aaPredicted RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms