RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 RAD21L1Q9H4I0 556 aa8.31□□□□□ -1.08
CSDE1-214ENST00000530886 MRPL40Q9NQ50 206 aaKnown RBP8.31□□□□□ -1.08
CSDE1-214ENST00000530886 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.31□□□□□ -1.08
CSDE1-214ENST00000530886 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.31□□□□□ -1.08
CSDE1-214ENST00000530886 VAV3Q9UKW4 847 aa8.31□□□□□ -1.08
CSDE1-214ENST00000530886 FAM170AA1A519 330 aa8.31□□□□□ -1.08
CSDE1-214ENST00000530886 CLIC2O15247 247 aa8.31□□□□□ -1.08
CSDE1-214ENST00000530886 BANF1O75531 89 aa8.31□□□□□ -1.08
CSDE1-214ENST00000530886 RALBP11234 206 aa8.31□□□□□ -1.08
CSDE1-214ENST00000530886 FGF3P11487 239 aaPredicted RBP8.31□□□□□ -1.08
CSDE1-214ENST00000530886 UNGP13051 313 aaPredicted RBP8.31□□□□□ -1.08
CSDE1-214ENST00000530886 CYP11B1P15538 503 aa8.31□□□□□ -1.08
CSDE1-214ENST00000530886 GRK2P25098 689 aa8.31□□□□□ -1.08
CSDE1-214ENST00000530886 HLCSP50747 726 aa8.31□□□□□ -1.08
CSDE1-214ENST00000530886 RHDQ02161 417 aa8.31□□□□□ -1.08
CSDE1-214ENST00000530886 OCA2Q04671 838 aa8.31□□□□□ -1.08
CSDE1-214ENST00000530886 NIPAL4Q0D2K0 466 aa8.31□□□□□ -1.08
CSDE1-214ENST00000530886 CETN1Q12798 172 aa8.31□□□□□ -1.08
CSDE1-214ENST00000530886 TRAP1Q12931 704 aaKnown RBP8.31□□□□□ -1.08
CSDE1-214ENST00000530886 NFX1Q12986 1120 aaKnown RBP8.31□□□□□ -1.08
CSDE1-214ENST00000530886 NRF1Q16656 503 aa8.31□□□□□ -1.08
CSDE1-214ENST00000530886 DUSP7Q16829 419 aa8.31□□□□□ -1.08
CSDE1-214ENST00000530886 GTF2IRD2BQ6EKJ0 949 aa8.31□□□□□ -1.08
CSDE1-214ENST00000530886 GTF2IRD2Q86UP8 949 aa8.31□□□□□ -1.08
CSDE1-214ENST00000530886 ARMC8Q8IUR7 673 aa8.31□□□□□ -1.08
CSDE1-214ENST00000530886 MFSD4AQ8N468 514 aa8.31□□□□□ -1.08
CSDE1-214ENST00000530886 NATD1Q8N6N6 113 aa8.31□□□□□ -1.08
CSDE1-214ENST00000530886 ASCC1Q8N9N2 400 aaKnown RBP8.31□□□□□ -1.08
CSDE1-214ENST00000530886 SLC35B2Q8TB61 432 aa8.31□□□□□ -1.08
CSDE1-214ENST00000530886 EMILIN2Q9BXX0 1053 aa8.31□□□□□ -1.08
CSDE1-214ENST00000530886 NAA50Q9GZZ1 169 aaKnown RBP8.31□□□□□ -1.08
CSDE1-214ENST00000530886 PLAC1Q9HBJ0 212 aa8.31□□□□□ -1.08
CSDE1-214ENST00000530886 RGSL1A5PLK6 1076 aa8.31□□□□□ -1.08
CSDE1-214ENST00000530886 TRIM49D1C9J1S8 452 aa8.31□□□□□ -1.08
CSDE1-214ENST00000530886 TRDMT1O14717 391 aaKnown RBP8.31□□□□□ -1.08
CSDE1-214ENST00000530886 ASNA1O43681 348 aa8.31□□□□□ -1.08
CSDE1-214ENST00000530886 MARCH6O60337 910 aa8.31□□□□□ -1.08
CSDE1-214ENST00000530886 TADA2AO75478 443 aa8.31□□□□□ -1.08
CSDE1-214ENST00000530886 BMP1P13497 986 aa8.31□□□□□ -1.08
CSDE1-214ENST00000530886 SLC7A1P30825 629 aa8.31□□□□□ -1.08
CSDE1-214ENST00000530886 SLC1A6P48664 564 aa8.31□□□□□ -1.08
CSDE1-214ENST00000530886 PRKG1Q13976 671 aa8.31□□□□□ -1.08
CSDE1-214ENST00000530886 AASDHQ4L235 1098 aaPredicted RBP8.31□□□□□ -1.08
CSDE1-214ENST00000530886 LRRC38Q5VT99 294 aa8.31□□□□□ -1.08
CSDE1-214ENST00000530886 NXNQ6DKJ4 435 aa8.31□□□□□ -1.08
CSDE1-214ENST00000530886 PPP1R2P3Q6NXS1 205 aa8.31□□□□□ -1.08
CSDE1-214ENST00000530886 TUBA3EQ6PEY2 450 aa8.31□□□□□ -1.08
CSDE1-214ENST00000530886 EPGNQ6UW88 154 aa8.31□□□□□ -1.08
CSDE1-214ENST00000530886 NSMFQ6X4W1 530 aa8.31□□□□□ -1.08
CSDE1-214ENST00000530886 KIAA0408Q6ZU52 694 aa8.31□□□□□ -1.08
CSDE1-214ENST00000530886 C16orf86Q6ZW13 317 aa8.31□□□□□ -1.08
CSDE1-214ENST00000530886 RHPN2Q8IUC4 686 aa8.31□□□□□ -1.08
CSDE1-214ENST00000530886 SPARTQ8N0X7 666 aa8.31□□□□□ -1.08
CSDE1-214ENST00000530886 PHTF2Q8N3S3 785 aa8.31□□□□□ -1.08
CSDE1-214ENST00000530886 EFCAB3Q8N7B9 438 aa8.31□□□□□ -1.08
CSDE1-214ENST00000530886 MARVELD3Q96A59 401 aa8.31□□□□□ -1.08
CSDE1-214ENST00000530886 SORT1Q99523 831 aa8.31□□□□□ -1.08
CSDE1-214ENST00000530886 ATP13A3Q9H7F0 1226 aa8.31□□□□□ -1.08
CSDE1-214ENST00000530886 POLR1BQ9H9Y6 1135 aa8.31□□□□□ -1.08
CSDE1-214ENST00000530886 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.31□□□□□ -1.08
CSDE1-214ENST00000530886 SERPINB13Q9UIV8 391 aa8.31□□□□□ -1.08
CSDE1-214ENST00000530886 UGT2A1Q9Y4X1 527 aa8.31□□□□□ -1.08
CSDE1-214ENST00000530886 TEX264Q9Y6I9 313 aa8.31□□□□□ -1.08
CSDE1-214ENST00000530886 TCRBV3S1A0A5B6 114 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 DLGAP1O14490 977 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 SHOXO15266 292 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 SERPINE1P05121 402 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 P4HBP07237 508 aaKnown RBP8.3□□□□□ -1.08
CSDE1-214ENST00000530886 BMP3P12645 472 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 ETS1P14921 441 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 ITIH1P19827 911 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 NR4A1P22736 598 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 PRKCHP24723 683 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 GAD2Q05329 585 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 CBX2Q14781 532 aaPredicted RBP8.3□□□□□ -1.08
CSDE1-214ENST00000530886 CYP4A22Q5TCH4 519 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 MOXD1Q6UVY6 613 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 KCTD8Q6ZWB6 473 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 HERC6Q8IVU3 1022 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 KIAA2013Q8IYS2 634 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 MCOLN2Q8IZK6 566 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 PDIK1LQ8N165 341 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 MYO1HQ8N1T3 1032 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 SLC4A11Q8NBS3 891 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 FLAD1Q8NFF5 587 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 KAT5Q92993 513 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 COA7Q96BR5 231 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 SLITRK1Q96PX8 696 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 DIABLOQ9NR28 239 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 KCNQ5Q9NR82 932 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 GINM1Q9NU53 330 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 NRXN2Q9P2S2 1712 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.3□□□□□ -1.08
CSDE1-214ENST00000530886 ZSCAN5BA6NJL1 495 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 USP17L5A8MUK1 530 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 POLR1CO15160 346 aaPredicted RBP8.3□□□□□ -1.08
CSDE1-214ENST00000530886 ZBTB14O43829 449 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 DNAJB5O75953 348 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 GCNT3O95395 438 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 MATN1P21941 496 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms