RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 DIO1P49895 249 aa8.03□□□□□ -1.12
CSDE1-213ENST00000530784 ZNF543Q08ER8 600 aa8.03□□□□□ -1.12
CSDE1-213ENST00000530784 SREBF2Q12772 1141 aa8.03□□□□□ -1.12
CSDE1-213ENST00000530784 LMAN2Q12907 356 aa8.03□□□□□ -1.12
CSDE1-213ENST00000530784 SRSF7Q16629 238 aaKnown RBP eCLIP8.03□□□□□ -1.12
CSDE1-213ENST00000530784 CEP78Q5JTW2 689 aa8.03□□□□□ -1.12
CSDE1-213ENST00000530784 MANEALQ5VSG8 457 aa8.03□□□□□ -1.12
CSDE1-213ENST00000530784 KLHDC7AQ5VTJ3 777 aa8.03□□□□□ -1.12
CSDE1-213ENST00000530784 RRAGBQ5VZM2 374 aa8.03□□□□□ -1.12
CSDE1-213ENST00000530784 SERPINA13PQ6UXR4 307 aa8.03□□□□□ -1.12
CSDE1-213ENST00000530784 ARMC9Q7Z3E5 817 aa8.03□□□□□ -1.12
CSDE1-213ENST00000530784 GALNT4Q8N4A0 578 aa8.03□□□□□ -1.12
CSDE1-213ENST00000530784 ZNF668Q96K58 619 aaPredicted RBP8.03□□□□□ -1.12
CSDE1-213ENST00000530784 HIST1H2AAQ96QV6 131 aa8.03□□□□□ -1.12
CSDE1-213ENST00000530784 SH2D3AQ9BRG2 576 aa8.03□□□□□ -1.12
CSDE1-213ENST00000530784 MGAT4CQ9UBM8 478 aa8.03□□□□□ -1.12
CSDE1-213ENST00000530784 DNAJB11Q9UBS4 358 aa8.03□□□□□ -1.12
CSDE1-213ENST00000530784 MYH3P11055 1940 aa8.02□□□□□ -1.13
CSDE1-213ENST00000530784 ADAMTS3O15072 1205 aa8.02□□□□□ -1.13
CSDE1-213ENST00000530784 CDK4P11802 303 aa8.02□□□□□ -1.13
CSDE1-213ENST00000530784 IFIT5Q13325 482 aaKnown RBP8.02□□□□□ -1.13
CSDE1-213ENST00000530784 PRKG1Q13976 671 aa8.02□□□□□ -1.13
CSDE1-213ENST00000530784 DLGAP5Q15398 846 aa8.02□□□□□ -1.13
CSDE1-213ENST00000530784 PKN2Q16513 984 aaKnown RBP8.02□□□□□ -1.13
CSDE1-213ENST00000530784 CATSPERGQ6ZRH7 1159 aa8.02□□□□□ -1.13
CSDE1-213ENST00000530784 USP49Q70CQ1 688 aa8.02□□□□□ -1.13
CSDE1-213ENST00000530784 IQCDQ96DY2 449 aa8.02□□□□□ -1.13
CSDE1-213ENST00000530784 ZBED3Q96IU2 234 aaPredicted RBP8.02□□□□□ -1.13
CSDE1-213ENST00000530784 QTRT1Q9BXR0 403 aaKnown RBP8.02□□□□□ -1.13
CSDE1-213ENST00000530784 KRTAP17-1Q9BYP8 105 aa8.02□□□□□ -1.13
CSDE1-213ENST00000530784 CD209Q9NNX6 404 aa8.02□□□□□ -1.13
CSDE1-213ENST00000530784 TRIM36Q9NQ86 728 aa8.02□□□□□ -1.13
CSDE1-213ENST00000530784 VPS51Q9UID3 782 aa8.02□□□□□ -1.13
CSDE1-213ENST00000530784 HPSEQ9Y251 543 aa8.02□□□□□ -1.13
CSDE1-213ENST00000530784 CASP8AP2Q9UKL3 1982 aa8.02□□□□□ -1.13
CSDE1-213ENST00000530784 TAF5LO75529 589 aa8.01□□□□□ -1.13
CSDE1-213ENST00000530784 CERS1P27544 350 aa8.01□□□□□ -1.13
CSDE1-213ENST00000530784 TM4SF4P48230 202 aa8.01□□□□□ -1.13
CSDE1-213ENST00000530784 COPB1P53618 953 aaKnown RBP8.01□□□□□ -1.13
CSDE1-213ENST00000530784 HLTFQ14527 1009 aaKnown RBP eCLIP8.01□□□□□ -1.13
CSDE1-213ENST00000530784 CLEC9AQ6UXN8 241 aa8.01□□□□□ -1.13
CSDE1-213ENST00000530784 C15orf52Q6ZUT6 534 aaKnown RBP8.01□□□□□ -1.13
CSDE1-213ENST00000530784 LIX1LQ8IVB5 337 aa8.01□□□□□ -1.13
CSDE1-213ENST00000530784 CERS5Q8N5B7 392 aa8.01□□□□□ -1.13
CSDE1-213ENST00000530784 C5orf34Q96MH7 638 aa8.01□□□□□ -1.13
CSDE1-213ENST00000530784 SEMA4CQ9C0C4 833 aa8.01□□□□□ -1.13
CSDE1-213ENST00000530784 DEFB129Q9H1M3 183 aa8.01□□□□□ -1.13
CSDE1-213ENST00000530784 NKX1-2Q9UD57 310 aaPredicted RBP8.01□□□□□ -1.13
CSDE1-213ENST00000530784 WDR91A4D1P6 747 aa8□□□□□ -1.13
CSDE1-213ENST00000530784 POM121BA6NF01 834 aa8□□□□□ -1.13
CSDE1-213ENST00000530784 SNAP23O00161 211 aa8□□□□□ -1.13
CSDE1-213ENST00000530784 GRM8O00222 908 aa8□□□□□ -1.13
CSDE1-213ENST00000530784 PPP6CO00743 305 aa8□□□□□ -1.13
CSDE1-213ENST00000530784 THAP12O43422 761 aa8□□□□□ -1.13
CSDE1-213ENST00000530784 PRR35P0CG20 571 aa8□□□□□ -1.13
CSDE1-213ENST00000530784 EPHB2P29323 1055 aa8□□□□□ -1.13
CSDE1-213ENST00000530784 CASP5P51878 434 aa8□□□□□ -1.13
CSDE1-213ENST00000530784 SAFBQ15424 915 aaKnown RBP eCLIP8□□□□□ -1.13
CSDE1-213ENST00000530784 FAM187BQ17R55 369 aa8□□□□□ -1.13
CSDE1-213ENST00000530784 CCDC57Q2TAC2 916 aa8□□□□□ -1.13
CSDE1-213ENST00000530784 BEND3Q5T5X7 828 aa8□□□□□ -1.13
CSDE1-213ENST00000530784 MZT2AQ6P582 158 aa8□□□□□ -1.13
CSDE1-213ENST00000530784 YTHDF3Q7Z739 585 aaKnown RBP8□□□□□ -1.13
CSDE1-213ENST00000530784 WDR63Q8IWG1 891 aa8□□□□□ -1.13
CSDE1-213ENST00000530784 ATP11CQ8NB49 1132 aa8□□□□□ -1.13
CSDE1-213ENST00000530784 SNX15Q9NRS6 342 aa8□□□□□ -1.13
CSDE1-213ENST00000530784 SLC27A6Q9Y2P4 619 aa8□□□□□ -1.13
CSDE1-213ENST00000530784 SSC5DA1L4H1 1573 aa8□□□□□ -1.13
CSDE1-213ENST00000530784 AKAP11Q9UKA4 1901 aa7.99□□□□□ -1.13
CSDE1-213ENST00000530784 A0A087WZ62 844 aa7.99□□□□□ -1.13
CSDE1-213ENST00000530784 CLRN2A0PK11 232 aa7.99□□□□□ -1.13
CSDE1-213ENST00000530784 SNX2O60749 519 aa7.99□□□□□ -1.13
CSDE1-213ENST00000530784 MT-CO3P00414 261 aa7.99□□□□□ -1.13
CSDE1-213ENST00000530784 TUBB4AP04350 444 aa7.99□□□□□ -1.13
CSDE1-213ENST00000530784 CHRM5P08912 532 aaPredicted RBP7.99□□□□□ -1.13
CSDE1-213ENST00000530784 CYP2A6P11509 494 aaPredicted RBP7.99□□□□□ -1.13
CSDE1-213ENST00000530784 APEHP13798 732 aaKnown RBP7.99□□□□□ -1.13
CSDE1-213ENST00000530784 TRIM27P14373 513 aa7.99□□□□□ -1.13
CSDE1-213ENST00000530784 CD19P15391 556 aa7.99□□□□□ -1.13
CSDE1-213ENST00000530784 MCM5P33992 734 aa7.99□□□□□ -1.13
CSDE1-213ENST00000530784 PRIM2P49643 509 aa7.99□□□□□ -1.13
CSDE1-213ENST00000530784 RBM5P52756 815 aaKnown RBP eCLIP7.99□□□□□ -1.13
CSDE1-213ENST00000530784 FKBP1AP62942 108 aaKnown RBP7.99□□□□□ -1.13
CSDE1-213ENST00000530784 SUPT20HL1Q3ZLR7 823 aa7.99□□□□□ -1.13
CSDE1-213ENST00000530784 MTX3Q5HYI7 312 aa7.99□□□□□ -1.13
CSDE1-213ENST00000530784 FBXO46Q6PJ61 603 aaPredicted RBP7.99□□□□□ -1.13
CSDE1-213ENST00000530784 LDHAL6AQ6ZMR3 332 aa7.99□□□□□ -1.13
CSDE1-213ENST00000530784 CCAR1Q8IX12 1150 aaKnown RBP7.99□□□□□ -1.13
CSDE1-213ENST00000530784 ADAMTS18Q8TE60 1221 aa7.99□□□□□ -1.13
CSDE1-213ENST00000530784 ZDHHC12Q96GR4 267 aa7.99□□□□□ -1.13
CSDE1-213ENST00000530784 CCDC17Q96LX7 622 aa7.99□□□□□ -1.13
CSDE1-213ENST00000530784 TBCBQ99426 244 aa7.99□□□□□ -1.13
CSDE1-213ENST00000530784 SELENOOQ9BVL4 669 aa7.99□□□□□ -1.13
CSDE1-213ENST00000530784 SLC29A3Q9BZD2 475 aa7.99□□□□□ -1.13
CSDE1-213ENST00000530784 VEZTQ9HBM0 779 aa7.99□□□□□ -1.13
CSDE1-213ENST00000530784 A0A1B0GUL6 1792 aa7.98□□□□□ -1.13
CSDE1-213ENST00000530784 PMM2O15305 246 aa7.98□□□□□ -1.13
CSDE1-213ENST00000530784 ANP32CO43423 234 aa7.98□□□□□ -1.13
CSDE1-213ENST00000530784 TMPRSS11DO60235 418 aa7.98□□□□□ -1.13
CSDE1-213ENST00000530784 PLIN1O60240 522 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms