RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 SHBQ15464 509 aa15.46■□□□□ 0.07
CAPN1-219ENST00000530495 GATAD2AQ86YP4 633 aa15.46■□□□□ 0.07
CAPN1-219ENST00000530495 CCDC117Q8IWD4 279 aaPredicted RBP15.46■□□□□ 0.07
CAPN1-219ENST00000530495 CFAP52Q8N1V2 620 aa15.46■□□□□ 0.07
CAPN1-219ENST00000530495 DQX1Q8TE96 717 aaKnown RBP15.46■□□□□ 0.07
CAPN1-219ENST00000530495 SAP25Q8TEE9 199 aa15.46■□□□□ 0.07
CAPN1-219ENST00000530495 SERPINB11Q96P15 392 aa15.46■□□□□ 0.07
CAPN1-219ENST00000530495 NT5C1BQ96P26 610 aa15.46■□□□□ 0.07
CAPN1-219ENST00000530495 BBC3Q96PG8 261 aaPredicted RBP15.46■□□□□ 0.07
CAPN1-219ENST00000530495 MIS12Q9H081 205 aa15.46■□□□□ 0.07
CAPN1-219ENST00000530495 METTL14Q9HCE5 456 aaKnown RBP15.46■□□□□ 0.07
CAPN1-219ENST00000530495 SLCO3A1Q9UIG8 710 aa15.46■□□□□ 0.07
CAPN1-219ENST00000530495 LOC400499M0QZD8 3231 aa15.45■□□□□ 0.06
CAPN1-219ENST00000530495 EDDM13A0A1B0GTR0 161 aa15.45■□□□□ 0.06
CAPN1-219ENST00000530495 A0A1W2PR77 199 aa15.45■□□□□ 0.06
CAPN1-219ENST00000530495 M0QYV0 167 aa15.45■□□□□ 0.06
CAPN1-219ENST00000530495 ENC1O14682 589 aa15.45■□□□□ 0.06
CAPN1-219ENST00000530495 WNT9AO14904 365 aa15.45■□□□□ 0.06
CAPN1-219ENST00000530495 LUC7L3O95232 432 aaKnown RBP15.45■□□□□ 0.06
CAPN1-219ENST00000530495 MOCS3O95396 460 aa15.45■□□□□ 0.06
CAPN1-219ENST00000530495 LDOC1O95751 146 aaPredicted RBP15.45■□□□□ 0.06
CAPN1-219ENST00000530495 GOT1P17174 413 aa15.45■□□□□ 0.06
CAPN1-219ENST00000530495 BRD2P25440 801 aaKnown RBP15.45■□□□□ 0.06
CAPN1-219ENST00000530495 CTSOP43234 321 aaPredicted RBP15.45■□□□□ 0.06
CAPN1-219ENST00000530495 ECT2LQ008S8 904 aa15.45■□□□□ 0.06
CAPN1-219ENST00000530495 CDH18Q13634 790 aa15.45■□□□□ 0.06
CAPN1-219ENST00000530495 DCAF6Q58WW2 860 aa15.45■□□□□ 0.06
CAPN1-219ENST00000530495 MMS22LQ6ZRQ5 1243 aa15.45■□□□□ 0.06
CAPN1-219ENST00000530495 SND1Q7KZF4 910 aaKnown RBP eCLIP15.45■□□□□ 0.06
CAPN1-219ENST00000530495 BEND5Q7L4P6 421 aa15.45■□□□□ 0.06
CAPN1-219ENST00000530495 FMR1NBQ8N0W7 255 aaPredicted RBP15.45■□□□□ 0.06
CAPN1-219ENST00000530495 AADATQ8N5Z0 425 aa15.45■□□□□ 0.06
CAPN1-219ENST00000530495 LMO3Q8TAP4 145 aa15.45■□□□□ 0.06
CAPN1-219ENST00000530495 SPATA20Q8TB22 786 aa15.45■□□□□ 0.06
CAPN1-219ENST00000530495 GTPBP4Q9BZE4 634 aaKnown RBP15.45■□□□□ 0.06
CAPN1-219ENST00000530495 NUCKS1Q9H1E3 243 aaKnown RBP15.45■□□□□ 0.06
CAPN1-219ENST00000530495 AASDHPPTQ9NRN7 309 aa15.45■□□□□ 0.06
CAPN1-219ENST00000530495 TPX2Q9ULW0 747 aaKnown RBP15.45■□□□□ 0.06
CAPN1-219ENST00000530495 NAALADL1Q9UQQ1 740 aa15.45■□□□□ 0.06
CAPN1-219ENST00000530495 NYNRINQ9P2P1 1898 aaKnown RBP15.44■□□□□ 0.06
CAPN1-219ENST00000530495 TRIM49BA6NDI0 452 aa15.44■□□□□ 0.06
CAPN1-219ENST00000530495 YKT6O15498 198 aa15.44■□□□□ 0.06
CAPN1-219ENST00000530495 ITGAVP06756 1048 aa15.44■□□□□ 0.06
CAPN1-219ENST00000530495 JUPP14923 745 aa15.44■□□□□ 0.06
CAPN1-219ENST00000530495 ABCB4P21439 1286 aa15.44■□□□□ 0.06
CAPN1-219ENST00000530495 C5AR1P21730 350 aa15.44■□□□□ 0.06
CAPN1-219ENST00000530495 SYPL2Q5VXT5 272 aa15.44■□□□□ 0.06
CAPN1-219ENST00000530495 APCDD1Q8J025 514 aa15.44■□□□□ 0.06
CAPN1-219ENST00000530495 PPM1KQ8N3J5 372 aa15.44■□□□□ 0.06
CAPN1-219ENST00000530495 PTPRN2Q92932 1015 aa15.44■□□□□ 0.06
CAPN1-219ENST00000530495 KAT5Q92993 513 aa15.44■□□□□ 0.06
CAPN1-219ENST00000530495 CNDP2Q96KP4 475 aaKnown RBP15.44■□□□□ 0.06
CAPN1-219ENST00000530495 ERVMER34-1Q9H9K5 563 aa15.44■□□□□ 0.06
CAPN1-219ENST00000530495 KNTC1P50748 2209 aa15.43■□□□□ 0.06
CAPN1-219ENST00000530495 TLR4O00206 839 aa15.43■□□□□ 0.06
CAPN1-219ENST00000530495 CBX4O00257 560 aa15.43■□□□□ 0.06
CAPN1-219ENST00000530495 PLK4O00444 970 aa15.43■□□□□ 0.06
CAPN1-219ENST00000530495 SART1O43290 800 aaKnown RBP15.43■□□□□ 0.06
CAPN1-219ENST00000530495 LATO43561 262 aa15.43■□□□□ 0.06
CAPN1-219ENST00000530495 RFPL3O75679 317 aa15.43■□□□□ 0.06
CAPN1-219ENST00000530495 ADH1BP00325 375 aa15.43■□□□□ 0.06
CAPN1-219ENST00000530495 CALCAP01258 141 aa15.43■□□□□ 0.06
CAPN1-219ENST00000530495 HNF1BP35680 557 aa15.43■□□□□ 0.06
CAPN1-219ENST00000530495 GPD2P43304 727 aa15.43■□□□□ 0.06
CAPN1-219ENST00000530495 RXRGP48443 463 aa15.43■□□□□ 0.06
CAPN1-219ENST00000530495 ARRB1P49407 418 aaPredicted RBP15.43■□□□□ 0.06
CAPN1-219ENST00000530495 ADPRHP54922 357 aa15.43■□□□□ 0.06
CAPN1-219ENST00000530495 LGI2Q8N0V4 545 aa15.43■□□□□ 0.06
CAPN1-219ENST00000530495 STK40Q8N2I9 435 aa15.43■□□□□ 0.06
CAPN1-219ENST00000530495 EID2Q8N6I1 236 aa15.43■□□□□ 0.06
CAPN1-219ENST00000530495 OR14C36Q8NHC7 312 aa15.43■□□□□ 0.06
CAPN1-219ENST00000530495 ADAM32Q8TC27 787 aa15.43■□□□□ 0.06
CAPN1-219ENST00000530495 TSC1Q92574 1164 aa15.43■□□□□ 0.06
CAPN1-219ENST00000530495 SERAC1Q96JX3 654 aa15.43■□□□□ 0.06
CAPN1-219ENST00000530495 RPL10LQ96L21 214 aaKnown RBP15.43■□□□□ 0.06
CAPN1-219ENST00000530495 CEP63Q96MT8 703 aa15.43■□□□□ 0.06
CAPN1-219ENST00000530495 GDPD2Q9HCC8 539 aa15.43■□□□□ 0.06
CAPN1-219ENST00000530495 GDF3Q9NR23 364 aa15.43■□□□□ 0.06
CAPN1-219ENST00000530495 XPO7Q9UIA9 1087 aaKnown RBP15.43■□□□□ 0.06
CAPN1-219ENST00000530495 CELSR3Q9NYQ7 3312 aa15.43■□□□□ 0.06
CAPN1-219ENST00000530495 MYLKQ15746 1914 aa15.43■□□□□ 0.06
CAPN1-219ENST00000530495 P4HA2O15460 535 aa15.42■□□□□ 0.06
CAPN1-219ENST00000530495 SMC2O95347 1197 aa15.42■□□□□ 0.06
CAPN1-219ENST00000530495 MOCS2O96007 188 aaPredicted RBP15.42■□□□□ 0.06
CAPN1-219ENST00000530495 ACADSBP45954 432 aa15.42■□□□□ 0.06
CAPN1-219ENST00000530495 PSMD8P48556 350 aa15.42■□□□□ 0.06
CAPN1-219ENST00000530495 NXPH1P58417 271 aa15.42■□□□□ 0.06
CAPN1-219ENST00000530495 GCNT1Q02742 428 aa15.42■□□□□ 0.06
CAPN1-219ENST00000530495 CETN1Q12798 172 aa15.42■□□□□ 0.06
CAPN1-219ENST00000530495 DNAJC3Q13217 504 aa15.42■□□□□ 0.06
CAPN1-219ENST00000530495 SLC12A1Q13621 1099 aa15.42■□□□□ 0.06
CAPN1-219ENST00000530495 ELAVL3Q14576 367 aaKnown RBP15.42■□□□□ 0.06
CAPN1-219ENST00000530495 SLC45A4Q5BKX6 768 aa15.42■□□□□ 0.06
CAPN1-219ENST00000530495 C6orf118Q5T5N4 469 aa15.42■□□□□ 0.06
CAPN1-219ENST00000530495 RNF219Q5W0B1 726 aaPredicted RBP15.42■□□□□ 0.06
CAPN1-219ENST00000530495 RRAGAQ7L523 313 aa15.42■□□□□ 0.06
CAPN1-219ENST00000530495 TAC4Q86UU9 113 aa15.42■□□□□ 0.06
CAPN1-219ENST00000530495 MFSD2AQ8NA29 543 aa15.42■□□□□ 0.06
CAPN1-219ENST00000530495 STK32AQ8WU08 396 aa15.42■□□□□ 0.06
CAPN1-219ENST00000530495 FAM149B1Q96BN6 582 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms