RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 GCNT4Q9P109 453 aa9.3□□□□□ -0.92
CCDC90B-217ENST00000530253 HMGXB4Q9UGU5 601 aa9.3□□□□□ -0.92
CCDC90B-217ENST00000530253 AJAP1Q9UKB5 411 aaPredicted RBP9.3□□□□□ -0.92
CCDC90B-217ENST00000530253 DSEQ9UL01 958 aa9.3□□□□□ -0.92
CCDC90B-217ENST00000530253 SSX2IPQ9Y2D8 614 aa9.3□□□□□ -0.92
CCDC90B-217ENST00000530253 SIK3Q9Y2K2 1263 aa9.3□□□□□ -0.92
CCDC90B-217ENST00000530253 ARHGEF37A1IGU5 675 aa9.29□□□□□ -0.92
CCDC90B-217ENST00000530253 WDR27A2RRH5 827 aa9.29□□□□□ -0.92
CCDC90B-217ENST00000530253 HUS1O60921 280 aa9.29□□□□□ -0.92
CCDC90B-217ENST00000530253 GLP2RO95838 553 aa9.29□□□□□ -0.92
CCDC90B-217ENST00000530253 CYP1A1P04798 512 aaPredicted RBP9.29□□□□□ -0.92
CCDC90B-217ENST00000530253 OR4Q2P0C623 313 aa9.29□□□□□ -0.92
CCDC90B-217ENST00000530253 C6P13671 934 aa9.29□□□□□ -0.92
CCDC90B-217ENST00000530253 ACO1P21399 889 aaKnown RBP9.29□□□□□ -0.92
CCDC90B-217ENST00000530253 TACR2P21452 398 aa9.29□□□□□ -0.92
CCDC90B-217ENST00000530253 PON1P27169 355 aa9.29□□□□□ -0.92
CCDC90B-217ENST00000530253 GTF2F1P35269 517 aaKnown RBP eCLIP9.29□□□□□ -0.92
CCDC90B-217ENST00000530253 NDUFV1P49821 464 aa9.29□□□□□ -0.92
CCDC90B-217ENST00000530253 ROR1Q01973 937 aa9.29□□□□□ -0.92
CCDC90B-217ENST00000530253 CREMQ03060 361 aa9.29□□□□□ -0.92
CCDC90B-217ENST00000530253 CUL2Q13617 745 aa9.29□□□□□ -0.92
CCDC90B-217ENST00000530253 RAB33AQ14088 237 aa9.29□□□□□ -0.92
CCDC90B-217ENST00000530253 CTXN3Q4LDR2 81 aa9.29□□□□□ -0.92
CCDC90B-217ENST00000530253 E4F1Q66K89 784 aaPredicted RBP9.29□□□□□ -0.92
CCDC90B-217ENST00000530253 ZNF280DQ6N043 979 aa9.29□□□□□ -0.92
CCDC90B-217ENST00000530253 KIAA1841Q6NSI8 718 aa9.29□□□□□ -0.92
CCDC90B-217ENST00000530253 PDXDC1Q6P996 788 aa9.29□□□□□ -0.92
CCDC90B-217ENST00000530253 GBP6Q6ZN66 633 aa9.29□□□□□ -0.92
CCDC90B-217ENST00000530253 CREBRFQ8IUR6 639 aa9.29□□□□□ -0.92
CCDC90B-217ENST00000530253 ZNF513Q8N8E2 541 aaPredicted RBP9.29□□□□□ -0.92
CCDC90B-217ENST00000530253 CPLX3Q8WVH0 158 aa9.29□□□□□ -0.92
CCDC90B-217ENST00000530253 NAP1L5Q96NT1 182 aaPredicted RBP9.29□□□□□ -0.92
CCDC90B-217ENST00000530253 TWNKQ96RR1 684 aa9.29□□□□□ -0.92
CCDC90B-217ENST00000530253 IMPG2Q9BZV3 1241 aa9.29□□□□□ -0.92
CCDC90B-217ENST00000530253 ZCWPW1Q9H0M4 648 aa9.29□□□□□ -0.92
CCDC90B-217ENST00000530253 GANQ9H2C0 597 aa9.29□□□□□ -0.92
CCDC90B-217ENST00000530253 CYP3A43Q9HB55 503 aa9.29□□□□□ -0.92
CCDC90B-217ENST00000530253 THEGQ9P2T0 379 aa9.29□□□□□ -0.92
CCDC90B-217ENST00000530253 APEX2Q9UBZ4 518 aa9.29□□□□□ -0.92
CCDC90B-217ENST00000530253 R3HCC1Q9Y3T6 440 aaKnown RBP9.29□□□□□ -0.92
CCDC90B-217ENST00000530253 CDY1Q9Y6F8 540 aa9.29□□□□□ -0.92
CCDC90B-217ENST00000530253 PLXNA3P51805 1871 aa9.29□□□□□ -0.92
CCDC90B-217ENST00000530253 OR6C75A6NL08 312 aa9.28□□□□□ -0.92
CCDC90B-217ENST00000530253 H7C4K7 107 aa9.28□□□□□ -0.92
CCDC90B-217ENST00000530253 PER2O15055 1255 aa9.28□□□□□ -0.92
CCDC90B-217ENST00000530253 EPHB6O15197 1021 aa9.28□□□□□ -0.92
CCDC90B-217ENST00000530253 TEX33O43247 280 aa9.28□□□□□ -0.92
CCDC90B-217ENST00000530253 AP5Z1O43299 807 aa9.28□□□□□ -0.92
CCDC90B-217ENST00000530253 ABLIM3O94929 683 aa9.28□□□□□ -0.92
CCDC90B-217ENST00000530253 C1RP00736 705 aa9.28□□□□□ -0.92
CCDC90B-217ENST00000530253 WEE2P0C1S8 567 aa9.28□□□□□ -0.92
CCDC90B-217ENST00000530253 P4HA1P13674 534 aa9.28□□□□□ -0.92
CCDC90B-217ENST00000530253 EPCAMP16422 314 aa9.28□□□□□ -0.92
CCDC90B-217ENST00000530253 ACAT1P24752 427 aaKnown RBP9.28□□□□□ -0.92
CCDC90B-217ENST00000530253 LMO2P25791 158 aa9.28□□□□□ -0.92
CCDC90B-217ENST00000530253 OR1D2P34982 312 aa9.28□□□□□ -0.92
CCDC90B-217ENST00000530253 PBX1P40424 430 aa9.28□□□□□ -0.92
CCDC90B-217ENST00000530253 NRIP1P48552 1158 aa9.28□□□□□ -0.92
CCDC90B-217ENST00000530253 LHX1P48742 406 aa9.28□□□□□ -0.92
CCDC90B-217ENST00000530253 KLK7P49862 253 aa9.28□□□□□ -0.92
CCDC90B-217ENST00000530253 CLCN4P51793 760 aa9.28□□□□□ -0.92
CCDC90B-217ENST00000530253 GCNT1Q02742 428 aa9.28□□□□□ -0.92
CCDC90B-217ENST00000530253 LRMPQ12912 555 aa9.28□□□□□ -0.92
CCDC90B-217ENST00000530253 EXOC3L4Q17RC7 722 aa9.28□□□□□ -0.92
CCDC90B-217ENST00000530253 GJB7Q6PEY0 223 aa9.28□□□□□ -0.92
CCDC90B-217ENST00000530253 USP51Q70EK9 711 aa9.28□□□□□ -0.92
CCDC90B-217ENST00000530253 LRRTM3Q86VH5 581 aa9.28□□□□□ -0.92
CCDC90B-217ENST00000530253 Q8N1Y9 231 aa9.28□□□□□ -0.92
CCDC90B-217ENST00000530253 EFHBQ8N7U6 833 aa9.28□□□□□ -0.92
CCDC90B-217ENST00000530253 MICAL1Q8TDZ2 1067 aa9.28□□□□□ -0.92
CCDC90B-217ENST00000530253 NT5C1BQ96P26 610 aa9.28□□□□□ -0.92
CCDC90B-217ENST00000530253 ASB2Q96Q27 587 aa9.28□□□□□ -0.92
CCDC90B-217ENST00000530253 ERGIC2Q96RQ1 377 aa9.28□□□□□ -0.92
CCDC90B-217ENST00000530253 MMS19Q96T76 1030 aa9.28□□□□□ -0.92
CCDC90B-217ENST00000530253 CDCA3Q99618 268 aaPredicted RBP9.28□□□□□ -0.92
CCDC90B-217ENST00000530253 SYT15Q9BQS2 421 aa9.28□□□□□ -0.92
CCDC90B-217ENST00000530253 ACBD6Q9BR61 282 aa9.28□□□□□ -0.92
CCDC90B-217ENST00000530253 NAA15Q9BXJ9 866 aaKnown RBP9.28□□□□□ -0.92
CCDC90B-217ENST00000530253 DPEP3Q9H4B8 488 aa9.28□□□□□ -0.92
CCDC90B-217ENST00000530253 L2HGDHQ9H9P8 463 aa9.28□□□□□ -0.92
CCDC90B-217ENST00000530253 PLCB1Q9NQ66 1216 aa9.28□□□□□ -0.92
CCDC90B-217ENST00000530253 TMLHEQ9NVH6 421 aa9.28□□□□□ -0.92
CCDC90B-217ENST00000530253 DDX43Q9NXZ2 648 aaKnown RBP9.28□□□□□ -0.92
CCDC90B-217ENST00000530253 ST6GALNAC2Q9UJ37 374 aa9.28□□□□□ -0.92
CCDC90B-217ENST00000530253 FBXW11Q9UKB1 542 aa9.28□□□□□ -0.92
CCDC90B-217ENST00000530253 COA3Q9Y2R0 106 aaPredicted RBP9.28□□□□□ -0.92
CCDC90B-217ENST00000530253 MTMR11A4FU01 709 aa9.27□□□□□ -0.93
CCDC90B-217ENST00000530253 GOLGA6L19H0YKK7 550 aa9.27□□□□□ -0.93
CCDC90B-217ENST00000530253 LINC01565O15544 149 aa9.27□□□□□ -0.93
CCDC90B-217ENST00000530253 TGM5O43548 720 aa9.27□□□□□ -0.93
CCDC90B-217ENST00000530253 ATP2C2O75185 946 aa9.27□□□□□ -0.93
CCDC90B-217ENST00000530253 TBX10O75333 385 aa9.27□□□□□ -0.93
CCDC90B-217ENST00000530253 NOL4O94818 638 aa9.27□□□□□ -0.93
CCDC90B-217ENST00000530253 ZNF28P17035 718 aa9.27□□□□□ -0.93
CCDC90B-217ENST00000530253 CDK11BP21127 795 aaKnown RBP9.27□□□□□ -0.93
CCDC90B-217ENST00000530253 LTBRP36941 435 aa9.27□□□□□ -0.93
CCDC90B-217ENST00000530253 ZNF132P52740 706 aa9.27□□□□□ -0.93
CCDC90B-217ENST00000530253 NDST1P52848 882 aa9.27□□□□□ -0.93
CCDC90B-217ENST00000530253 PSMC1P62191 440 aaKnown RBP9.27□□□□□ -0.93
CCDC90B-217ENST00000530253 TPM4P67936 248 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms