RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 AVPR1AP37288 418 aa14.83□□□□□ -0.03
TTC39A-216ENST00000530004 HCAR3P49019 387 aa14.83□□□□□ -0.03
TTC39A-216ENST00000530004 ZNF135P52742 658 aaPredicted RBP14.83□□□□□ -0.03
TTC39A-216ENST00000530004 SLC7A9P82251 487 aa14.83□□□□□ -0.03
TTC39A-216ENST00000530004 SLC10A2Q12908 348 aaPredicted RBP14.83□□□□□ -0.03
TTC39A-216ENST00000530004 GPS1Q13098 491 aa14.83□□□□□ -0.03
TTC39A-216ENST00000530004 P3H1Q32P28 736 aa14.83□□□□□ -0.03
TTC39A-216ENST00000530004 MIB1Q86YT6 1006 aa14.83□□□□□ -0.03
TTC39A-216ENST00000530004 FAM71DQ8N9W8 422 aa14.83□□□□□ -0.03
TTC39A-216ENST00000530004 TSEN2Q8NCE0 465 aaKnown RBP14.83□□□□□ -0.03
TTC39A-216ENST00000530004 HAPLN3Q96S86 360 aa14.83□□□□□ -0.03
TTC39A-216ENST00000530004 FAM129AQ9BZQ8 928 aa14.83□□□□□ -0.03
TTC39A-216ENST00000530004 OSBPL2Q9H1P3 480 aa14.83□□□□□ -0.03
TTC39A-216ENST00000530004 TMEM51Q9NW97 253 aa14.83□□□□□ -0.03
TTC39A-216ENST00000530004 GDE1Q9NZC3 331 aa14.83□□□□□ -0.03
TTC39A-216ENST00000530004 DTLQ9NZJ0 730 aa14.83□□□□□ -0.03
TTC39A-216ENST00000530004 MTRF1LQ9UGC7 380 aaKnown RBP14.83□□□□□ -0.03
TTC39A-216ENST00000530004 CDH7Q9ULB5 785 aa14.83□□□□□ -0.03
TTC39A-216ENST00000530004 HPCAL4Q9UM19 191 aa14.83□□□□□ -0.03
TTC39A-216ENST00000530004 DCLK1O15075 740 aa14.83□□□□□ -0.04
TTC39A-216ENST00000530004 TP73O15350 636 aa14.83□□□□□ -0.04
TTC39A-216ENST00000530004 MFSD11O43934 449 aa14.83□□□□□ -0.04
TTC39A-216ENST00000530004 PAGE1O75459 146 aa14.83□□□□□ -0.04
TTC39A-216ENST00000530004 LRIG2O94898 1065 aa14.83□□□□□ -0.04
TTC39A-216ENST00000530004 MOCS2O96007 188 aaPredicted RBP14.83□□□□□ -0.04
TTC39A-216ENST00000530004 ERCC2P18074 760 aa14.83□□□□□ -0.04
TTC39A-216ENST00000530004 STIP1P31948 543 aaKnown RBP14.83□□□□□ -0.04
TTC39A-216ENST00000530004 ITGA8P53708 1063 aa14.83□□□□□ -0.04
TTC39A-216ENST00000530004 TBX4P57082 545 aa14.83□□□□□ -0.04
TTC39A-216ENST00000530004 IZUMO3Q5VZ72 239 aa14.83□□□□□ -0.04
TTC39A-216ENST00000530004 MREGQ8N565 214 aa14.83□□□□□ -0.04
TTC39A-216ENST00000530004 CCDC33Q8N5R6 958 aa14.83□□□□□ -0.04
TTC39A-216ENST00000530004 BBOF1Q8ND07 529 aa14.83□□□□□ -0.04
TTC39A-216ENST00000530004 SLC39A13Q96H72 371 aa14.83□□□□□ -0.04
TTC39A-216ENST00000530004 ZFRQ96KR1 1074 aaKnown RBP14.83□□□□□ -0.04
TTC39A-216ENST00000530004 MYADMQ96S97 322 aa14.83□□□□□ -0.04
TTC39A-216ENST00000530004 SIK2Q9H0K1 926 aa14.83□□□□□ -0.04
TTC39A-216ENST00000530004 VIPAS39Q9H9C1 493 aa14.83□□□□□ -0.04
TTC39A-216ENST00000530004 PRDM6Q9NQX0 595 aa14.83□□□□□ -0.04
TTC39A-216ENST00000530004 ANAPC5Q9UJX4 755 aa14.83□□□□□ -0.04
TTC39A-216ENST00000530004 XIRP2A4UGR9 3374 aa14.82□□□□□ -0.04
TTC39A-216ENST00000530004 SLC12A8A0AV02 714 aa14.82□□□□□ -0.04
TTC39A-216ENST00000530004 BCLAF3A2AJT9 711 aaKnown RBP14.82□□□□□ -0.04
TTC39A-216ENST00000530004 KCNU1A8MYU2 1149 aa14.82□□□□□ -0.04
TTC39A-216ENST00000530004 KCNN4O15554 427 aa14.82□□□□□ -0.04
TTC39A-216ENST00000530004 RBL1P28749 1068 aa14.82□□□□□ -0.04
TTC39A-216ENST00000530004 WEE1P30291 646 aa14.82□□□□□ -0.04
TTC39A-216ENST00000530004 GBP2P32456 591 aaPredicted RBP14.82□□□□□ -0.04
TTC39A-216ENST00000530004 HSPA9P38646 679 aaKnown RBP14.82□□□□□ -0.04
TTC39A-216ENST00000530004 ZXDBP98169 803 aa14.82□□□□□ -0.04
TTC39A-216ENST00000530004 TFF2Q03403 129 aa14.82□□□□□ -0.04
TTC39A-216ENST00000530004 XRCC4Q13426 336 aa14.82□□□□□ -0.04
TTC39A-216ENST00000530004 PAFAH1B3Q15102 231 aaKnown RBP14.82□□□□□ -0.04
TTC39A-216ENST00000530004 BZW1Q7L1Q6 419 aaKnown RBP14.82□□□□□ -0.04
TTC39A-216ENST00000530004 TMC3Q7Z5M5 1100 aa14.82□□□□□ -0.04
TTC39A-216ENST00000530004 CDKL3Q8IVW4 592 aaPredicted RBP14.82□□□□□ -0.04
TTC39A-216ENST00000530004 ARID3BQ8IVW6 561 aaPredicted RBP14.82□□□□□ -0.04
TTC39A-216ENST00000530004 ZSCAN18Q8TBC5 510 aaPredicted RBP14.82□□□□□ -0.04
TTC39A-216ENST00000530004 LRRN4Q8WUT4 740 aa14.82□□□□□ -0.04
TTC39A-216ENST00000530004 LRRC45Q96CN5 670 aa14.82□□□□□ -0.04
TTC39A-216ENST00000530004 FCRL2Q96LA5 508 aaPredicted RBP14.82□□□□□ -0.04
TTC39A-216ENST00000530004 OLFM3Q96PB7 478 aa14.82□□□□□ -0.04
TTC39A-216ENST00000530004 KLF16Q9BXK1 252 aaPredicted RBP14.82□□□□□ -0.04
TTC39A-216ENST00000530004 SMG9Q9H0W8 520 aaKnown RBP14.82□□□□□ -0.04
TTC39A-216ENST00000530004 USP29Q9HBJ7 922 aa14.82□□□□□ -0.04
TTC39A-216ENST00000530004 SMPD4Q9NXE4 827 aa14.82□□□□□ -0.04
TTC39A-216ENST00000530004 ARHGAP26Q9UNA1 814 aa14.82□□□□□ -0.04
TTC39A-216ENST00000530004 CPQQ9Y646 472 aa14.82□□□□□ -0.04
TTC39A-216ENST00000530004 CFAP69A5D8W1 941 aa14.81□□□□□ -0.04
TTC39A-216ENST00000530004 DNALI1O14645 258 aaPredicted RBP14.81□□□□□ -0.04
TTC39A-216ENST00000530004 SLC2A3P11169 496 aa14.81□□□□□ -0.04
TTC39A-216ENST00000530004 EPHB2P29323 1055 aa14.81□□□□□ -0.04
TTC39A-216ENST00000530004 COG7P83436 770 aa14.81□□□□□ -0.04
TTC39A-216ENST00000530004 CAV1Q03135 178 aa14.81□□□□□ -0.04
TTC39A-216ENST00000530004 DHX9Q08211 1270 aaKnown RBP14.81□□□□□ -0.04
TTC39A-216ENST00000530004 TRIP4Q15650 581 aaPredicted RBP14.81□□□□□ -0.04
TTC39A-216ENST00000530004 SMAD2Q15796 467 aaKnown RBP14.81□□□□□ -0.04
TTC39A-216ENST00000530004 SLC45A4Q5BKX6 768 aa14.81□□□□□ -0.04
TTC39A-216ENST00000530004 PTCRAQ6ISU1 281 aaPredicted RBP14.81□□□□□ -0.04
TTC39A-216ENST00000530004 RHBDF2Q6PJF5 856 aa14.81□□□□□ -0.04
TTC39A-216ENST00000530004 NETO2Q8NC67 525 aa14.81□□□□□ -0.04
TTC39A-216ENST00000530004 USP13Q92995 863 aaPredicted RBP14.81□□□□□ -0.04
TTC39A-216ENST00000530004 ASB16Q96NS5 453 aa14.81□□□□□ -0.04
TTC39A-216ENST00000530004 GKN1Q9NS71 199 aa14.81□□□□□ -0.04
TTC39A-216ENST00000530004 TDP1Q9NUW8 608 aa14.81□□□□□ -0.04
TTC39A-216ENST00000530004 XPO7Q9UIA9 1087 aaKnown RBP14.81□□□□□ -0.04
TTC39A-216ENST00000530004 HBS1LQ9Y450 684 aaKnown RBP14.81□□□□□ -0.04
TTC39A-216ENST00000530004 ZFP37Q9Y6Q3 630 aaPredicted RBP14.81□□□□□ -0.04
TTC39A-216ENST00000530004 ANAPC1Q9H1A4 1944 aa14.81□□□□□ -0.04
TTC39A-216ENST00000530004 OBSL1O75147 1896 aa14.81□□□□□ -0.04
TTC39A-216ENST00000530004 PRAMEF12O95522 483 aa14.8□□□□□ -0.04
TTC39A-216ENST00000530004 APOEP02649 317 aa14.8□□□□□ -0.04
TTC39A-216ENST00000530004 LAMP2P13473 410 aa14.8□□□□□ -0.04
TTC39A-216ENST00000530004 RPL22P35268 128 aaKnown RBP14.8□□□□□ -0.04
TTC39A-216ENST00000530004 KPNA1P52294 538 aaPredicted RBP14.8□□□□□ -0.04
TTC39A-216ENST00000530004 NRLP54845 237 aa14.8□□□□□ -0.04
TTC39A-216ENST00000530004 PUS10Q3MIT2 529 aaKnown RBP14.8□□□□□ -0.04
TTC39A-216ENST00000530004 FAM78AQ5JUQ0 283 aa14.8□□□□□ -0.04
TTC39A-216ENST00000530004 RWDD4Q6NW29 188 aaKnown RBP14.8□□□□□ -0.04
TTC39A-216ENST00000530004 OTOP3Q7RTS5 596 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms