RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 E9PAM4 449 aa13.06□□□□□ -0.32
CCDC90B-216ENST00000529856 MFAP3LO75121 409 aa13.06□□□□□ -0.32
CCDC90B-216ENST00000529856 CLDN11O75508 207 aa13.06□□□□□ -0.32
CCDC90B-216ENST00000529856 CNTN5O94779 1100 aa13.06□□□□□ -0.32
CCDC90B-216ENST00000529856 LMNAP02545 664 aaKnown RBP13.06□□□□□ -0.32
CCDC90B-216ENST00000529856 ATP5BP06576 529 aaKnown RBP13.06□□□□□ -0.32
CCDC90B-216ENST00000529856 DLDP09622 509 aaKnown RBP13.06□□□□□ -0.32
CCDC90B-216ENST00000529856 CSKP41240 450 aa13.06□□□□□ -0.32
CCDC90B-216ENST00000529856 MRE11P49959 708 aa13.06□□□□□ -0.32
CCDC90B-216ENST00000529856 PLK1P53350 603 aa13.06□□□□□ -0.32
CCDC90B-216ENST00000529856 ADKP55263 362 aaKnown RBP13.06□□□□□ -0.32
CCDC90B-216ENST00000529856 CDH4P55283 916 aa13.06□□□□□ -0.32
CCDC90B-216ENST00000529856 OXCT1P55809 520 aa13.06□□□□□ -0.32
CCDC90B-216ENST00000529856 SRSF5Q13243 272 aaKnown RBP13.06□□□□□ -0.32
CCDC90B-216ENST00000529856 ZNF177Q13360 481 aaPredicted RBP13.06□□□□□ -0.32
CCDC90B-216ENST00000529856 PTPRNQ16849 979 aa13.06□□□□□ -0.32
CCDC90B-216ENST00000529856 TSR1Q2NL82 804 aaKnown RBP13.06□□□□□ -0.32
CCDC90B-216ENST00000529856 FUT11Q495W5 492 aa13.06□□□□□ -0.32
CCDC90B-216ENST00000529856 PITRM1Q5JRX3 1037 aa13.06□□□□□ -0.32
CCDC90B-216ENST00000529856 ANO7Q6IWH7 933 aa13.06□□□□□ -0.32
CCDC90B-216ENST00000529856 CXorf57Q6NSI4 855 aaKnown RBP13.06□□□□□ -0.32
CCDC90B-216ENST00000529856 ALKBH5Q6P6C2 394 aaKnown RBP13.06□□□□□ -0.32
CCDC90B-216ENST00000529856 ASCL5Q7RTU5 278 aa13.06□□□□□ -0.32
CCDC90B-216ENST00000529856 TMC6Q7Z403 805 aa13.06□□□□□ -0.32
CCDC90B-216ENST00000529856 APCDD1Q8J025 514 aa13.06□□□□□ -0.32
CCDC90B-216ENST00000529856 MDGA1Q8NFP4 955 aa13.06□□□□□ -0.32
CCDC90B-216ENST00000529856 CYB5D2Q8WUJ1 264 aa13.06□□□□□ -0.32
CCDC90B-216ENST00000529856 GAB3Q8WWW8 586 aa13.06□□□□□ -0.32
CCDC90B-216ENST00000529856 NTAN1Q96AB6 310 aa13.06□□□□□ -0.32
CCDC90B-216ENST00000529856 MRPL47Q9HD33 250 aaKnown RBP13.06□□□□□ -0.32
CCDC90B-216ENST00000529856 ABHD10Q9NUJ1 306 aa13.06□□□□□ -0.32
CCDC90B-216ENST00000529856 ZNHIT6Q9NWK9 470 aaKnown RBP13.06□□□□□ -0.32
CCDC90B-216ENST00000529856 OR12D3Q9UGF7 316 aa13.06□□□□□ -0.32
CCDC90B-216ENST00000529856 NENFQ9UMX5 172 aa13.06□□□□□ -0.32
CCDC90B-216ENST00000529856 TBC1D30Q9Y2I9 924 aa13.06□□□□□ -0.32
CCDC90B-216ENST00000529856 RAD54BQ9Y620 910 aa13.06□□□□□ -0.32
CCDC90B-216ENST00000529856 SCINQ9Y6U3 715 aa13.06□□□□□ -0.32
CCDC90B-216ENST00000529856 EML5Q05BV3 1969 aa13.05□□□□□ -0.32
CCDC90B-216ENST00000529856 SSU72P8A0A1W2PR75 194 aa13.05□□□□□ -0.32
CCDC90B-216ENST00000529856 AKR1B15C9JRZ8 316 aaPredicted RBP13.05□□□□□ -0.32
CCDC90B-216ENST00000529856 SRGAP2O75044 1071 aa13.05□□□□□ -0.32
CCDC90B-216ENST00000529856 MOCS3O95396 460 aa13.05□□□□□ -0.32
CCDC90B-216ENST00000529856 ASLP04424 464 aa13.05□□□□□ -0.32
CCDC90B-216ENST00000529856 DESP17661 470 aa13.05□□□□□ -0.32
CCDC90B-216ENST00000529856 GABRG2P18507 467 aa13.05□□□□□ -0.32
CCDC90B-216ENST00000529856 PSMA2P25787 234 aa13.05□□□□□ -0.32
CCDC90B-216ENST00000529856 ZNF75DP51815 510 aa13.05□□□□□ -0.32
CCDC90B-216ENST00000529856 NRG1Q02297 640 aaPredicted RBP13.05□□□□□ -0.32
CCDC90B-216ENST00000529856 SCAPQ12770 1279 aa13.05□□□□□ -0.32
CCDC90B-216ENST00000529856 SIM2Q14190 667 aaPredicted RBP13.05□□□□□ -0.32
CCDC90B-216ENST00000529856 ASTE1Q2TB18 679 aaPredicted RBP13.05□□□□□ -0.32
CCDC90B-216ENST00000529856 PLEKHG6Q3KR16 790 aa13.05□□□□□ -0.32
CCDC90B-216ENST00000529856 FNDC3BQ53EP0 1204 aaKnown RBP13.05□□□□□ -0.32
CCDC90B-216ENST00000529856 ALFQ53S48 1182 aa13.05□□□□□ -0.32
CCDC90B-216ENST00000529856 CCDC122Q5T0U0 273 aa13.05□□□□□ -0.32
CCDC90B-216ENST00000529856 SERPINA13PQ6UXR4 307 aa13.05□□□□□ -0.32
CCDC90B-216ENST00000529856 SLFN11Q7Z7L1 901 aa13.05□□□□□ -0.32
CCDC90B-216ENST00000529856 ALYREFQ86V81 257 aaKnown RBP13.05□□□□□ -0.32
CCDC90B-216ENST00000529856 CNGA4Q8IV77 575 aa13.05□□□□□ -0.32
CCDC90B-216ENST00000529856 CCDC185Q8N715 623 aa13.05□□□□□ -0.32
CCDC90B-216ENST00000529856 FNIP1Q8TF40 1166 aa13.05□□□□□ -0.32
CCDC90B-216ENST00000529856 HMGB4Q8WW32 186 aa13.05□□□□□ -0.32
CCDC90B-216ENST00000529856 PPP1R9BQ96SB3 815 aa13.05□□□□□ -0.32
CCDC90B-216ENST00000529856 ANP32EQ9BTT0 268 aa13.05□□□□□ -0.32
CCDC90B-216ENST00000529856 MAGEB5Q9BZ81 275 aa13.05□□□□□ -0.32
CCDC90B-216ENST00000529856 TRIM7Q9C029 511 aa13.05□□□□□ -0.32
CCDC90B-216ENST00000529856 TMEM245Q9H330 911 aa13.05□□□□□ -0.32
CCDC90B-216ENST00000529856 MYO1AQ9UBC5 1043 aa13.05□□□□□ -0.32
CCDC90B-216ENST00000529856 PPARGC1AQ9UBK2 798 aaKnown RBP13.05□□□□□ -0.32
CCDC90B-216ENST00000529856 DOCK4Q8N1I0 1966 aa13.05□□□□□ -0.32
CCDC90B-216ENST00000529856 MYO15AQ9UKN7 3530 aa13.05□□□□□ -0.32
CCDC90B-216ENST00000529856 ZBTB24O43167 697 aaPredicted RBP13.04□□□□□ -0.32
CCDC90B-216ENST00000529856 GFRA3O60609 400 aa13.04□□□□□ -0.32
CCDC90B-216ENST00000529856 RPP40O75818 363 aaKnown RBP13.04□□□□□ -0.32
CCDC90B-216ENST00000529856 SRPRAP08240 638 aaKnown RBP13.04□□□□□ -0.32
CCDC90B-216ENST00000529856 PRKCHP24723 683 aa13.04□□□□□ -0.32
CCDC90B-216ENST00000529856 MZF1P28698 734 aaPredicted RBP13.04□□□□□ -0.32
CCDC90B-216ENST00000529856 GALCP54803 685 aa13.04□□□□□ -0.32
CCDC90B-216ENST00000529856 AIF1P55008 147 aa13.04□□□□□ -0.32
CCDC90B-216ENST00000529856 GFPT1Q06210 699 aaPredicted RBP13.04□□□□□ -0.32
CCDC90B-216ENST00000529856 ZNF252P-AS1Q0IIN9 211 aa13.04□□□□□ -0.32
CCDC90B-216ENST00000529856 STARD3Q14849 445 aa13.04□□□□□ -0.32
CCDC90B-216ENST00000529856 SLC18A3Q16572 532 aa13.04□□□□□ -0.32
CCDC90B-216ENST00000529856 USP39Q53GS9 565 aaKnown RBP13.04□□□□□ -0.32
CCDC90B-216ENST00000529856 MANEALQ5VSG8 457 aa13.04□□□□□ -0.32
CCDC90B-216ENST00000529856 SCYL2Q6P3W7 929 aa13.04□□□□□ -0.32
CCDC90B-216ENST00000529856 PGBD3Q8N328 593 aa13.04□□□□□ -0.32
CCDC90B-216ENST00000529856 KDM1BQ8NB78 822 aa13.04□□□□□ -0.32
CCDC90B-216ENST00000529856 OR52K2Q8NGK3 314 aa13.04□□□□□ -0.32
CCDC90B-216ENST00000529856 ERLEC1Q96DZ1 483 aa13.04□□□□□ -0.32
CCDC90B-216ENST00000529856 ALG14Q96F25 216 aa13.04□□□□□ -0.32
CCDC90B-216ENST00000529856 MYO19Q96H55 970 aa13.04□□□□□ -0.32
CCDC90B-216ENST00000529856 MRFAP1L1Q96HT8 127 aa13.04□□□□□ -0.32
CCDC90B-216ENST00000529856 MRGPRX3Q96LB0 322 aa13.04□□□□□ -0.32
CCDC90B-216ENST00000529856 CHP1Q99653 195 aa13.04□□□□□ -0.32
CCDC90B-216ENST00000529856 FEM1AQ9BSK4 669 aa13.04□□□□□ -0.32
CCDC90B-216ENST00000529856 TPSD1Q9BZJ3 242 aa13.04□□□□□ -0.32
CCDC90B-216ENST00000529856 ZYG11BQ9C0D3 744 aa13.04□□□□□ -0.32
CCDC90B-216ENST00000529856 THAP2Q9H0W7 228 aa13.04□□□□□ -0.32
CCDC90B-216ENST00000529856 MPP6Q9NZW5 540 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms