RNA–Protein interactions for RNA: ENST00000529640.5

UBXN1-210, Transcript of UBX domain protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBXN1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-210ENST00000529640 KCNE4Q8WWG9 221 aa17.48■□□□□ 0.39
UBXN1-210ENST00000529640 EDEM1Q92611 657 aa17.48■□□□□ 0.39
UBXN1-210ENST00000529640 FAXDC2Q96IV6 333 aa17.48■□□□□ 0.39
UBXN1-210ENST00000529640 FAM129BQ96TA1 746 aa17.48■□□□□ 0.39
UBXN1-210ENST00000529640 ZSCAN16Q9H4T2 348 aaPredicted RBP17.48■□□□□ 0.39
UBXN1-210ENST00000529640 MTMR6Q9Y217 621 aa17.48■□□□□ 0.39
UBXN1-210ENST00000529640 EDDM13A0A1B0GTR0 161 aa17.47■□□□□ 0.39
UBXN1-210ENST00000529640 TULP2O00295 520 aa17.47■□□□□ 0.39
UBXN1-210ENST00000529640 TRIM38O00635 465 aa17.47■□□□□ 0.39
UBXN1-210ENST00000529640 XPO1O14980 1071 aaKnown RBP17.47■□□□□ 0.39
UBXN1-210ENST00000529640 WISP1O95388 367 aa17.47■□□□□ 0.39
UBXN1-210ENST00000529640 IGLV3-27P01718 113 aa17.47■□□□□ 0.39
UBXN1-210ENST00000529640 SRPRAP08240 638 aaKnown RBP17.47■□□□□ 0.39
UBXN1-210ENST00000529640 SLC6A4P31645 630 aa17.47■□□□□ 0.39
UBXN1-210ENST00000529640 NUDT1P36639 197 aa17.47■□□□□ 0.39
UBXN1-210ENST00000529640 SLC11A2P49281 568 aa17.47■□□□□ 0.39
UBXN1-210ENST00000529640 GABREP78334 506 aa17.47■□□□□ 0.39
UBXN1-210ENST00000529640 PPP3CAQ08209 521 aa17.47■□□□□ 0.39
UBXN1-210ENST00000529640 VAC14Q08AM6 782 aa17.47■□□□□ 0.39
UBXN1-210ENST00000529640 ADIGQ0VDE8 80 aa17.47■□□□□ 0.39
UBXN1-210ENST00000529640 MSANTD2Q6P1R3 559 aa17.47■□□□□ 0.39
UBXN1-210ENST00000529640 HJURPQ8NCD3 748 aaPredicted RBP17.47■□□□□ 0.39
UBXN1-210ENST00000529640 MED8Q96G25 268 aa17.47■□□□□ 0.39
UBXN1-210ENST00000529640 DPH1Q9BZG8 443 aa17.47■□□□□ 0.39
UBXN1-210ENST00000529640 LRRC4Q9HBW1 653 aa17.47■□□□□ 0.39
UBXN1-210ENST00000529640 CISHQ9NSE2 258 aa17.47■□□□□ 0.39
UBXN1-210ENST00000529640 ABCC13Q9NSE7 274 aa17.47■□□□□ 0.39
UBXN1-210ENST00000529640 ARHGAP20Q9P2F6 1191 aa17.47■□□□□ 0.39
UBXN1-210ENST00000529640 ERVW-1Q9UQF0 538 aa17.47■□□□□ 0.39
UBXN1-210ENST00000529640 TBC1D3DA0A087WVF3 549 aa17.46■□□□□ 0.39
UBXN1-210ENST00000529640 TBC1D3IA0A087WXS9 549 aa17.46■□□□□ 0.39
UBXN1-210ENST00000529640 TBC1D3EA0A087X179 549 aa17.46■□□□□ 0.39
UBXN1-210ENST00000529640 TBC1D3KA0A087X1G2 549 aa17.46■□□□□ 0.39
UBXN1-210ENST00000529640 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.46■□□□□ 0.39
UBXN1-210ENST00000529640 GOLGA6L7A0A1B0GV03 622 aa17.46■□□□□ 0.39
UBXN1-210ENST00000529640 TBC1D3FA6NER0 549 aaPredicted RBP17.46■□□□□ 0.39
UBXN1-210ENST00000529640 YJEFN3A6XGL0 299 aa17.46■□□□□ 0.39
UBXN1-210ENST00000529640 TTC34A8MYJ7 566 aa17.46■□□□□ 0.39
UBXN1-210ENST00000529640 TBC1D3LB9A6J9 549 aa17.46■□□□□ 0.39
UBXN1-210ENST00000529640 E7ENQ6 273 aa17.46■□□□□ 0.39
UBXN1-210ENST00000529640 KLRC4O43908 158 aa17.46■□□□□ 0.39
UBXN1-210ENST00000529640 SDC3O75056 442 aa17.46■□□□□ 0.39
UBXN1-210ENST00000529640 TBC1D3HP0C7X1 549 aa17.46■□□□□ 0.39
UBXN1-210ENST00000529640 TRIM49P0CI25 452 aa17.46■□□□□ 0.39
UBXN1-210ENST00000529640 TRIM49CP0CI26 452 aa17.46■□□□□ 0.39
UBXN1-210ENST00000529640 AFMP43652 599 aa17.46■□□□□ 0.39
UBXN1-210ENST00000529640 LSSP48449 732 aa17.46■□□□□ 0.39
UBXN1-210ENST00000529640 DAB2P98082 770 aa17.46■□□□□ 0.39
UBXN1-210ENST00000529640 NUGGCQ68CJ6 796 aa17.46■□□□□ 0.39
UBXN1-210ENST00000529640 TBC1D3GQ6DHY5 549 aa17.46■□□□□ 0.39
UBXN1-210ENST00000529640 TBC1D3CQ6IPX1 549 aa17.46■□□□□ 0.39
UBXN1-210ENST00000529640 INTS8Q75QN2 995 aaKnown RBP17.46■□□□□ 0.39
UBXN1-210ENST00000529640 PRPF39Q86UA1 669 aaKnown RBP17.46■□□□□ 0.39
UBXN1-210ENST00000529640 UNC45BQ8IWX7 931 aa17.46■□□□□ 0.39
UBXN1-210ENST00000529640 TBC1D3Q8IZP1 549 aaPredicted RBP17.46■□□□□ 0.39
UBXN1-210ENST00000529640 FAM131CQ96AQ9 280 aa17.46■□□□□ 0.39
UBXN1-210ENST00000529640 PRICKLE1Q96MT3 831 aaPredicted RBP17.46■□□□□ 0.39
UBXN1-210ENST00000529640 DEPDC7Q96QD5 511 aa17.46■□□□□ 0.39
UBXN1-210ENST00000529640 STIM2Q9P246 746 aa17.46■□□□□ 0.39
UBXN1-210ENST00000529640 DMTF1Q9Y222 760 aa17.46■□□□□ 0.39
UBXN1-210ENST00000529640 SSUH2Q9Y2M2 353 aa17.46■□□□□ 0.39
UBXN1-210ENST00000529640 KLK10O43240 276 aa17.45■□□□□ 0.38
UBXN1-210ENST00000529640 SLC28A2O43868 658 aa17.45■□□□□ 0.38
UBXN1-210ENST00000529640 OPA1O60313 960 aa17.45■□□□□ 0.38
UBXN1-210ENST00000529640 ACSL4O60488 711 aa17.45■□□□□ 0.38
UBXN1-210ENST00000529640 YEATS4O95619 227 aa17.45■□□□□ 0.38
UBXN1-210ENST00000529640 MZF1P28698 734 aaPredicted RBP17.45■□□□□ 0.38
UBXN1-210ENST00000529640 DRD3P35462 400 aa17.45■□□□□ 0.38
UBXN1-210ENST00000529640 ENPEPQ07075 957 aa17.45■□□□□ 0.38
UBXN1-210ENST00000529640 GOLGA7BQ2TAP0 167 aa17.45■□□□□ 0.38
UBXN1-210ENST00000529640 KMT5BQ4FZB7 885 aa17.45■□□□□ 0.38
UBXN1-210ENST00000529640 PITRM1Q5JRX3 1037 aa17.45■□□□□ 0.38
UBXN1-210ENST00000529640 SCML4Q8N228 414 aa17.45■□□□□ 0.38
UBXN1-210ENST00000529640 STK40Q8N2I9 435 aa17.45■□□□□ 0.38
UBXN1-210ENST00000529640 SLC25A45Q8N413 288 aa17.45■□□□□ 0.38
UBXN1-210ENST00000529640 OR4C6Q8NH72 309 aa17.45■□□□□ 0.38
UBXN1-210ENST00000529640 TATDN2Q93075 761 aa17.45■□□□□ 0.38
UBXN1-210ENST00000529640 AZIN2Q96A70 460 aa17.45■□□□□ 0.38
UBXN1-210ENST00000529640 KDM4CQ9H3R0 1056 aa17.45■□□□□ 0.38
UBXN1-210ENST00000529640 POLR1BQ9H9Y6 1135 aa17.45■□□□□ 0.38
UBXN1-210ENST00000529640 ASCL3Q9NQ33 180 aa17.45■□□□□ 0.38
UBXN1-210ENST00000529640 EXOC1Q9NV70 894 aa17.45■□□□□ 0.38
UBXN1-210ENST00000529640 CYTH4Q9UIA0 394 aa17.45■□□□□ 0.38
UBXN1-210ENST00000529640 COL27A1Q8IZC6 1860 aaPredicted RBP17.45■□□□□ 0.38
UBXN1-210ENST00000529640 TYW5A2RUC4 315 aaKnown RBP17.44■□□□□ 0.38
UBXN1-210ENST00000529640 USP12O75317 370 aa17.44■□□□□ 0.38
UBXN1-210ENST00000529640 CKMT1AP12532 417 aa17.44■□□□□ 0.38
UBXN1-210ENST00000529640 CTSOP43234 321 aaPredicted RBP17.44■□□□□ 0.38
UBXN1-210ENST00000529640 RPS24P62847 133 aaKnown RBP17.44■□□□□ 0.38
UBXN1-210ENST00000529640 BST2Q10589 180 aaKnown RBP17.44■□□□□ 0.38
UBXN1-210ENST00000529640 CDH18Q13634 790 aa17.44■□□□□ 0.38
UBXN1-210ENST00000529640 ELAVL3Q14576 367 aaKnown RBP17.44■□□□□ 0.38
UBXN1-210ENST00000529640 HS1BP3Q53T59 392 aa17.44■□□□□ 0.38
UBXN1-210ENST00000529640 NADSYN1Q6IA69 706 aa17.44■□□□□ 0.38
UBXN1-210ENST00000529640 TRIM69Q86WT6 500 aa17.44■□□□□ 0.38
UBXN1-210ENST00000529640 GRAMD1CQ8IYS0 662 aa17.44■□□□□ 0.38
UBXN1-210ENST00000529640 SIX6OS1Q8N1H7 587 aa17.44■□□□□ 0.38
UBXN1-210ENST00000529640 PTPRN2Q92932 1015 aa17.44■□□□□ 0.38
UBXN1-210ENST00000529640 TMEM8AQ9HCN3 771 aa17.44■□□□□ 0.38
UBXN1-210ENST00000529640 CNGB3Q9NQW8 809 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms