RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 PTPN7P35236 360 aa12.51□□□□□ -0.41
TRAF3IP2-211ENST00000528599 DHCR24Q15392 516 aa12.51□□□□□ -0.41
TRAF3IP2-211ENST00000528599 PPP2R5EQ16537 467 aa12.51□□□□□ -0.41
TRAF3IP2-211ENST00000528599 MPPE1Q53F39 396 aa12.51□□□□□ -0.41
TRAF3IP2-211ENST00000528599 FYB2Q5VWT5 728 aa12.51□□□□□ -0.41
TRAF3IP2-211ENST00000528599 KAZNQ674X7 775 aa12.51□□□□□ -0.41
TRAF3IP2-211ENST00000528599 TFAP2DQ7Z6R9 452 aa12.51□□□□□ -0.41
TRAF3IP2-211ENST00000528599 NLRP14Q86W24 1093 aa12.51□□□□□ -0.41
TRAF3IP2-211ENST00000528599 SLC44A3Q8N4M1 653 aa12.51□□□□□ -0.41
TRAF3IP2-211ENST00000528599 HJURPQ8NCD3 748 aaPredicted RBP12.51□□□□□ -0.41
TRAF3IP2-211ENST00000528599 DDI1Q8WTU0 396 aa12.51□□□□□ -0.41
TRAF3IP2-211ENST00000528599 ATP2A3Q93084 1043 aa12.51□□□□□ -0.41
TRAF3IP2-211ENST00000528599 MS4A14Q96JA4 679 aa12.51□□□□□ -0.41
TRAF3IP2-211ENST00000528599 PBKQ96KB5 322 aa12.51□□□□□ -0.41
TRAF3IP2-211ENST00000528599 NDFIP2Q9NV92 336 aa12.51□□□□□ -0.41
TRAF3IP2-211ENST00000528599 SAR1BQ9Y6B6 198 aa12.51□□□□□ -0.41
TRAF3IP2-211ENST00000528599 TCRBV7S2A1N4TA0A589 114 aa12.51□□□□□ -0.41
TRAF3IP2-211ENST00000528599 ARNTLO00327 626 aa12.51□□□□□ -0.41
TRAF3IP2-211ENST00000528599 DCLK1O15075 740 aa12.51□□□□□ -0.41
TRAF3IP2-211ENST00000528599 PENKP01210 267 aaPredicted RBP12.51□□□□□ -0.41
TRAF3IP2-211ENST00000528599 RHOQP17081 205 aa12.51□□□□□ -0.41
TRAF3IP2-211ENST00000528599 TCP1P17987 556 aaKnown RBP12.51□□□□□ -0.41
TRAF3IP2-211ENST00000528599 HOXD9P28356 352 aaPredicted RBP12.51□□□□□ -0.41
TRAF3IP2-211ENST00000528599 SEL1L2Q5TEA6 688 aa12.51□□□□□ -0.41
TRAF3IP2-211ENST00000528599 RNF43Q68DV7 783 aa12.51□□□□□ -0.41
TRAF3IP2-211ENST00000528599 RFX6Q8HWS3 928 aa12.51□□□□□ -0.41
TRAF3IP2-211ENST00000528599 RTL3Q8N8U3 475 aaKnown RBP12.51□□□□□ -0.41
TRAF3IP2-211ENST00000528599 NXPE3Q969Y0 559 aa12.51□□□□□ -0.41
TRAF3IP2-211ENST00000528599 ECT2Q9H8V3 914 aa12.51□□□□□ -0.41
TRAF3IP2-211ENST00000528599 MARK1Q9P0L2 795 aa12.51□□□□□ -0.41
TRAF3IP2-211ENST00000528599 IGSF9Q9P2J2 1179 aa12.51□□□□□ -0.41
TRAF3IP2-211ENST00000528599 CLEC4EQ9ULY5 219 aa12.51□□□□□ -0.41
TRAF3IP2-211ENST00000528599 DOCK4Q8N1I0 1966 aa12.5□□□□□ -0.41
TRAF3IP2-211ENST00000528599 A0A1B0GVM2 712 aa12.5□□□□□ -0.41
TRAF3IP2-211ENST00000528599 TCAF2A6NFQ2 919 aa12.5□□□□□ -0.41
TRAF3IP2-211ENST00000528599 WASH4PA8MWX3 477 aa12.5□□□□□ -0.41
TRAF3IP2-211ENST00000528599 NEDD8-MDP1E9PL57 170 aa12.5□□□□□ -0.41
TRAF3IP2-211ENST00000528599 FGF10O15520 208 aaPredicted RBP12.5□□□□□ -0.41
TRAF3IP2-211ENST00000528599 CST8O60676 142 aa12.5□□□□□ -0.41
TRAF3IP2-211ENST00000528599 NFATC1O95644 943 aa12.5□□□□□ -0.41
TRAF3IP2-211ENST00000528599 CYBBP04839 570 aa12.5□□□□□ -0.41
TRAF3IP2-211ENST00000528599 CETN2P41208 172 aa12.5□□□□□ -0.41
TRAF3IP2-211ENST00000528599 CDH4P55283 916 aa12.5□□□□□ -0.41
TRAF3IP2-211ENST00000528599 DYNLT1P63172 113 aa12.5□□□□□ -0.41
TRAF3IP2-211ENST00000528599 RUNX3Q13761 415 aa12.5□□□□□ -0.41
TRAF3IP2-211ENST00000528599 TUBB2AQ13885 445 aa12.5□□□□□ -0.41
TRAF3IP2-211ENST00000528599 GAB4Q2WGN9 574 aa12.5□□□□□ -0.41
TRAF3IP2-211ENST00000528599 ANO4Q32M45 955 aa12.5□□□□□ -0.41
TRAF3IP2-211ENST00000528599 MPP7Q5T2T1 576 aa12.5□□□□□ -0.41
TRAF3IP2-211ENST00000528599 TTC39BQ5VTQ0 682 aaPredicted RBP12.5□□□□□ -0.41
TRAF3IP2-211ENST00000528599 NCBP2-AS2Q69YL0 99 aa12.5□□□□□ -0.41
TRAF3IP2-211ENST00000528599 SLC9A4Q6AI14 798 aa12.5□□□□□ -0.41
TRAF3IP2-211ENST00000528599 CHST9Q7L1S5 443 aa12.5□□□□□ -0.41
TRAF3IP2-211ENST00000528599 MTERF4Q7Z6M4 381 aaKnown RBP12.5□□□□□ -0.41
TRAF3IP2-211ENST00000528599 SLC13A5Q86YT5 568 aaPredicted RBP12.5□□□□□ -0.41
TRAF3IP2-211ENST00000528599 RASGEF1CQ8N431 466 aa12.5□□□□□ -0.41
TRAF3IP2-211ENST00000528599 NPWQ8N729 165 aa12.5□□□□□ -0.41
TRAF3IP2-211ENST00000528599 PLD5Q8N7P1 536 aa12.5□□□□□ -0.41
TRAF3IP2-211ENST00000528599 NETO2Q8NC67 525 aa12.5□□□□□ -0.41
TRAF3IP2-211ENST00000528599 OR52K2Q8NGK3 314 aa12.5□□□□□ -0.41
TRAF3IP2-211ENST00000528599 TTC8Q8TAM2 541 aa12.5□□□□□ -0.41
TRAF3IP2-211ENST00000528599 WFDC5Q8TCV5 224 aa12.5□□□□□ -0.41
TRAF3IP2-211ENST00000528599 TUBB2BQ9BVA1 445 aa12.5□□□□□ -0.41
TRAF3IP2-211ENST00000528599 BBS2Q9BXC9 721 aa12.5□□□□□ -0.41
TRAF3IP2-211ENST00000528599 MAK16Q9BXY0 300 aaKnown RBP12.5□□□□□ -0.41
TRAF3IP2-211ENST00000528599 KLC2Q9H0B6 622 aa12.5□□□□□ -0.41
TRAF3IP2-211ENST00000528599 CATSPERBQ9H7T0 1116 aa12.5□□□□□ -0.41
TRAF3IP2-211ENST00000528599 BRD9Q9H8M2 597 aa12.5□□□□□ -0.41
TRAF3IP2-211ENST00000528599 TMEM248Q9NWD8 314 aa12.5□□□□□ -0.41
TRAF3IP2-211ENST00000528599 GTSE1Q9NYZ3 720 aa12.5□□□□□ -0.41
TRAF3IP2-211ENST00000528599 SMARCAL1Q9NZC9 954 aa12.5□□□□□ -0.41
TRAF3IP2-211ENST00000528599 EFR3BQ9Y2G0 817 aa12.5□□□□□ -0.41
TRAF3IP2-211ENST00000528599 MYOFQ9NZM1 2061 aa12.5□□□□□ -0.41
TRAF3IP2-211ENST00000528599 USP34Q70CQ2 3546 aa12.49□□□□□ -0.41
TRAF3IP2-211ENST00000528599 DMDP11532 3685 aa12.49□□□□□ -0.41
TRAF3IP2-211ENST00000528599 TYW5A2RUC4 315 aaKnown RBP12.49□□□□□ -0.41
TRAF3IP2-211ENST00000528599 TNFRSF10AO00220 468 aa12.49□□□□□ -0.41
TRAF3IP2-211ENST00000528599 CES2O00748 559 aa12.49□□□□□ -0.41
TRAF3IP2-211ENST00000528599 HOXC11O43248 304 aaPredicted RBP12.49□□□□□ -0.41
TRAF3IP2-211ENST00000528599 CLDN11O75508 207 aa12.49□□□□□ -0.41
TRAF3IP2-211ENST00000528599 LUC7L3O95232 432 aaKnown RBP12.49□□□□□ -0.41
TRAF3IP2-211ENST00000528599 SLU7O95391 586 aaKnown RBP12.49□□□□□ -0.41
TRAF3IP2-211ENST00000528599 ADH1CP00326 375 aa12.49□□□□□ -0.41
TRAF3IP2-211ENST00000528599 FGGP02679 453 aa12.49□□□□□ -0.41
TRAF3IP2-211ENST00000528599 ADH5P11766 374 aa12.49□□□□□ -0.41
TRAF3IP2-211ENST00000528599 TYRP14679 529 aa12.49□□□□□ -0.41
TRAF3IP2-211ENST00000528599 KLF1Q13351 362 aaPredicted RBP12.49□□□□□ -0.41
TRAF3IP2-211ENST00000528599 TFDP2Q14188 446 aa12.49□□□□□ -0.41
TRAF3IP2-211ENST00000528599 PAFAH1B3Q15102 231 aaKnown RBP12.49□□□□□ -0.41
TRAF3IP2-211ENST00000528599 FSCBQ5H9T9 825 aa12.49□□□□□ -0.41
TRAF3IP2-211ENST00000528599 TMCO3Q6UWJ1 677 aa12.49□□□□□ -0.41
TRAF3IP2-211ENST00000528599 BBS12Q6ZW61 710 aa12.49□□□□□ -0.41
TRAF3IP2-211ENST00000528599 ADAT2Q7Z6V5 191 aaKnown RBP12.49□□□□□ -0.41
TRAF3IP2-211ENST00000528599 CREG2Q8IUH2 290 aa12.49□□□□□ -0.41
TRAF3IP2-211ENST00000528599 TP53INP2Q8IXH6 220 aa12.49□□□□□ -0.41
TRAF3IP2-211ENST00000528599 CARNMT1Q8N4J0 409 aa12.49□□□□□ -0.41
TRAF3IP2-211ENST00000528599 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.49□□□□□ -0.41
TRAF3IP2-211ENST00000528599 CAPZA3Q96KX2 299 aa12.49□□□□□ -0.41
TRAF3IP2-211ENST00000528599 NOL6Q9H6R4 1146 aaKnown RBP12.49□□□□□ -0.41
TRAF3IP2-211ENST00000528599 MYO15AQ9UKN7 3530 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms