RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 RNASEH2AO75792 299 aaKnown RBP23.14■■□□□ 1.29
TRAPPC4-208ENST00000527680 C7P10643 843 aa23.14■■□□□ 1.29
TRAPPC4-208ENST00000527680 GRIA4P48058 902 aa23.14■■□□□ 1.29
TRAPPC4-208ENST00000527680 CST6Q15828 149 aa23.14■■□□□ 1.29
TRAPPC4-208ENST00000527680 KIAA0895LQ68EN5 471 aa23.14■■□□□ 1.29
TRAPPC4-208ENST00000527680 GJB7Q6PEY0 223 aa23.14■■□□□ 1.29
TRAPPC4-208ENST00000527680 LRSAM1Q6UWE0 723 aa23.14■■□□□ 1.29
TRAPPC4-208ENST00000527680 LAYNQ6UX15 382 aa23.14■■□□□ 1.29
TRAPPC4-208ENST00000527680 GLRX5Q86SX6 157 aa23.14■■□□□ 1.29
TRAPPC4-208ENST00000527680 RPL10LQ96L21 214 aaKnown RBP23.14■■□□□ 1.29
TRAPPC4-208ENST00000527680 MRGPRX3Q96LB0 322 aa23.14■■□□□ 1.29
TRAPPC4-208ENST00000527680 NEUROG2Q9H2A3 272 aa23.14■■□□□ 1.29
TRAPPC4-208ENST00000527680 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.14■■□□□ 1.29
TRAPPC4-208ENST00000527680 COX16Q9P0S2 106 aa23.14■■□□□ 1.29
TRAPPC4-208ENST00000527680 EDDM13A0A1B0GTR0 161 aa23.13■■□□□ 1.29
TRAPPC4-208ENST00000527680 A0A1W2PP55 124 aa23.13■■□□□ 1.29
TRAPPC4-208ENST00000527680 SLC9A1P19634 815 aa23.13■■□□□ 1.29
TRAPPC4-208ENST00000527680 ABCB4P21439 1286 aa23.13■■□□□ 1.29
TRAPPC4-208ENST00000527680 SLC8A1P32418 973 aa23.13■■□□□ 1.29
TRAPPC4-208ENST00000527680 NUMBP49757 651 aa23.13■■□□□ 1.29
TRAPPC4-208ENST00000527680 GALCP54803 685 aa23.13■■□□□ 1.29
TRAPPC4-208ENST00000527680 C21orf59P57076 290 aa23.13■■□□□ 1.29
TRAPPC4-208ENST00000527680 CDK17Q00537 523 aa23.13■■□□□ 1.29
TRAPPC4-208ENST00000527680 TAF5Q15542 800 aa23.13■■□□□ 1.29
TRAPPC4-208ENST00000527680 MEA1Q16626 185 aa23.13■■□□□ 1.29
TRAPPC4-208ENST00000527680 C9orf64Q5T6V5 341 aa23.13■■□□□ 1.29
TRAPPC4-208ENST00000527680 TRIM65Q6PJ69 517 aa23.13■■□□□ 1.29
TRAPPC4-208ENST00000527680 GBP6Q6ZN66 633 aa23.13■■□□□ 1.29
TRAPPC4-208ENST00000527680 APCDD1Q8J025 514 aa23.13■■□□□ 1.29
TRAPPC4-208ENST00000527680 KDM1BQ8NB78 822 aa23.13■■□□□ 1.29
TRAPPC4-208ENST00000527680 FAM204AQ9H8W3 233 aa23.13■■□□□ 1.29
TRAPPC4-208ENST00000527680 MUC22E2RYF6 1773 aaPredicted RBP23.13■■□□□ 1.29
TRAPPC4-208ENST00000527680 CHD6Q8TD26 2715 aa23.13■■□□□ 1.29
TRAPPC4-208ENST00000527680 LRRC72A6NJI9 287 aa23.12■■□□□ 1.29
TRAPPC4-208ENST00000527680 KCNU1A8MYU2 1149 aa23.12■■□□□ 1.29
TRAPPC4-208ENST00000527680 SLC2A3P11169 496 aa23.12■■□□□ 1.29
TRAPPC4-208ENST00000527680 PDCLQ13371 301 aa23.12■■□□□ 1.29
TRAPPC4-208ENST00000527680 CAMK4Q16566 473 aa23.12■■□□□ 1.29
TRAPPC4-208ENST00000527680 NCEH1Q6PIU2 408 aa23.12■■□□□ 1.29
TRAPPC4-208ENST00000527680 DBX2Q6ZNG2 339 aa23.12■■□□□ 1.29
TRAPPC4-208ENST00000527680 IGSF8Q969P0 613 aa23.12■■□□□ 1.29
TRAPPC4-208ENST00000527680 SKA1Q96BD8 255 aa23.12■■□□□ 1.29
TRAPPC4-208ENST00000527680 ACE2Q9BYF1 805 aaPredicted RBP23.12■■□□□ 1.29
TRAPPC4-208ENST00000527680 RWDD2AQ9UIY3 292 aa23.12■■□□□ 1.29
TRAPPC4-208ENST00000527680 ATXN1LP0C7T5 689 aaKnown RBP23.11■■□□□ 1.29
TRAPPC4-208ENST00000527680 PSMD8P48556 350 aa23.11■■□□□ 1.29
TRAPPC4-208ENST00000527680 PITX1P78337 314 aaPredicted RBP23.11■■□□□ 1.29
TRAPPC4-208ENST00000527680 SCAPQ12770 1279 aa23.11■■□□□ 1.29
TRAPPC4-208ENST00000527680 ARID5BQ14865 1188 aa23.11■■□□□ 1.29
TRAPPC4-208ENST00000527680 CCDC157Q569K6 752 aa23.11■■□□□ 1.29
TRAPPC4-208ENST00000527680 EFHC1Q5JVL4 640 aa23.11■■□□□ 1.29
TRAPPC4-208ENST00000527680 DEFB106AQ8N104 65 aa23.11■■□□□ 1.29
TRAPPC4-208ENST00000527680 STK40Q8N2I9 435 aa23.11■■□□□ 1.29
TRAPPC4-208ENST00000527680 PPP1R13BQ96KQ4 1090 aa23.11■■□□□ 1.29
TRAPPC4-208ENST00000527680 DDIT4Q9NX09 232 aa23.11■■□□□ 1.29
TRAPPC4-208ENST00000527680 KIAA1468Q9P260 1216 aa23.11■■□□□ 1.29
TRAPPC4-208ENST00000527680 SERGEFQ9UGK8 458 aa23.11■■□□□ 1.29
TRAPPC4-208ENST00000527680 BTBD3Q9Y2F9 522 aa23.11■■□□□ 1.29
TRAPPC4-208ENST00000527680 TMEM131Q92545 1883 aa23.11■■□□□ 1.29
TRAPPC4-208ENST00000527680 A0A1W2PPC4 97 aa23.1■■□□□ 1.29
TRAPPC4-208ENST00000527680 H0Y8X5 98 aa23.1■■□□□ 1.29
TRAPPC4-208ENST00000527680 GRAP2O75791 330 aa23.1■■□□□ 1.29
TRAPPC4-208ENST00000527680 IL1BP01584 269 aa23.1■■□□□ 1.29
TRAPPC4-208ENST00000527680 IGHV4-34P06331 123 aa23.1■■□□□ 1.29
TRAPPC4-208ENST00000527680 PDGFRAP16234 1089 aa23.1■■□□□ 1.29
TRAPPC4-208ENST00000527680 CCR1P32246 355 aa23.1■■□□□ 1.29
TRAPPC4-208ENST00000527680 MTIF2P46199 727 aaKnown RBP23.1■■□□□ 1.29
TRAPPC4-208ENST00000527680 CCT8P50990 548 aa23.1■■□□□ 1.29
TRAPPC4-208ENST00000527680 RACK1P63244 317 aaKnown RBP23.1■■□□□ 1.29
TRAPPC4-208ENST00000527680 PTK2Q05397 1052 aa23.1■■□□□ 1.29
TRAPPC4-208ENST00000527680 SLC12A1Q13621 1099 aa23.1■■□□□ 1.29
TRAPPC4-208ENST00000527680 TPD52L1Q16890 204 aaPredicted RBP23.1■■□□□ 1.29
TRAPPC4-208ENST00000527680 EXOC3L4Q17RC7 722 aa23.1■■□□□ 1.29
TRAPPC4-208ENST00000527680 RABGAP1LQ5R372 815 aa23.1■■□□□ 1.29
TRAPPC4-208ENST00000527680 OR6B2Q6IFH4 312 aa23.1■■□□□ 1.29
TRAPPC4-208ENST00000527680 CCNI2Q6ZMN8 369 aaPredicted RBP23.1■■□□□ 1.29
TRAPPC4-208ENST00000527680 SND1Q7KZF4 910 aaKnown RBP eCLIP23.1■■□□□ 1.29
TRAPPC4-208ENST00000527680 PASD1Q8IV76 773 aa23.1■■□□□ 1.29
TRAPPC4-208ENST00000527680 CCAR2Q8N163 923 aaKnown RBP23.1■■□□□ 1.29
TRAPPC4-208ENST00000527680 OR2T34Q8NGX1 318 aa23.1■■□□□ 1.29
TRAPPC4-208ENST00000527680 OR14C36Q8NHC7 312 aa23.1■■□□□ 1.29
TRAPPC4-208ENST00000527680 NOX5Q96PH1 765 aa23.1■■□□□ 1.29
TRAPPC4-208ENST00000527680 PPP1R9BQ96SB3 815 aa23.1■■□□□ 1.29
TRAPPC4-208ENST00000527680 FAM129BQ96TA1 746 aa23.1■■□□□ 1.29
TRAPPC4-208ENST00000527680 AASDHPPTQ9NRN7 309 aa23.1■■□□□ 1.29
TRAPPC4-208ENST00000527680 APEX2Q9UBZ4 518 aa23.1■■□□□ 1.29
TRAPPC4-208ENST00000527680 ZFHX4Q86UP3 3567 aa23.09■■□□□ 1.29
TRAPPC4-208ENST00000527680 BECN2A8MW95 431 aa23.09■■□□□ 1.29
TRAPPC4-208ENST00000527680 DFNA5O60443 496 aa23.09■■□□□ 1.29
TRAPPC4-208ENST00000527680 IGLV3-25P01717 112 aa23.09■■□□□ 1.29
TRAPPC4-208ENST00000527680 KRT9P35527 623 aa23.09■■□□□ 1.29
TRAPPC4-208ENST00000527680 GRK6P43250 576 aa23.09■■□□□ 1.29
TRAPPC4-208ENST00000527680 STK19P49842 368 aaPredicted RBP23.09■■□□□ 1.29
TRAPPC4-208ENST00000527680 SNX16P57768 344 aa23.09■■□□□ 1.29
TRAPPC4-208ENST00000527680 IL9RQ01113 521 aa23.09■■□□□ 1.29
TRAPPC4-208ENST00000527680 APBA1Q02410 837 aa23.09■■□□□ 1.29
TRAPPC4-208ENST00000527680 SULT2A1Q06520 285 aa23.09■■□□□ 1.29
TRAPPC4-208ENST00000527680 ACCSLQ4AC99 568 aa23.09■■□□□ 1.29
TRAPPC4-208ENST00000527680 KCNT1Q5JUK3 1230 aa23.09■■□□□ 1.29
TRAPPC4-208ENST00000527680 PRAMEF14Q5SWL7 426 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 239.9 ms