RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 MYEOVQ96EZ4 313 aa13.85□□□□□ -0.19
CAPN1-207ENST00000527189 PRMT1Q99873 361 aaKnown RBP13.85□□□□□ -0.19
CAPN1-207ENST00000527189 BTBD1Q9H0C5 482 aa13.85□□□□□ -0.19
CAPN1-207ENST00000527189 RSPH9Q9H1X1 276 aaPredicted RBP13.85□□□□□ -0.19
CAPN1-207ENST00000527189 FAM204AQ9H8W3 233 aa13.85□□□□□ -0.19
CAPN1-207ENST00000527189 SGK2Q9HBY8 427 aa13.85□□□□□ -0.19
CAPN1-207ENST00000527189 OSGEPQ9NPF4 335 aa13.85□□□□□ -0.19
CAPN1-207ENST00000527189 LMBRD1Q9NUN5 540 aa13.85□□□□□ -0.19
CAPN1-207ENST00000527189 DDIT4Q9NX09 232 aa13.85□□□□□ -0.19
CAPN1-207ENST00000527189 XPO7Q9UIA9 1087 aaKnown RBP13.85□□□□□ -0.19
CAPN1-207ENST00000527189 ASCC3Q8N3C0 2202 aaKnown RBP13.84□□□□□ -0.19
CAPN1-207ENST00000527189 A0A1B0GVM2 712 aa13.84□□□□□ -0.19
CAPN1-207ENST00000527189 TCAF2A6NFQ2 919 aa13.84□□□□□ -0.19
CAPN1-207ENST00000527189 GIPC1O14908 333 aa13.84□□□□□ -0.19
CAPN1-207ENST00000527189 BCAT2O15382 392 aaPredicted RBP13.84□□□□□ -0.19
CAPN1-207ENST00000527189 SCNN1AP37088 669 aa13.84□□□□□ -0.19
CAPN1-207ENST00000527189 NNMTP40261 264 aa13.84□□□□□ -0.19
CAPN1-207ENST00000527189 GABRB2P47870 512 aa13.84□□□□□ -0.19
CAPN1-207ENST00000527189 VASPP50552 380 aaPredicted RBP13.84□□□□□ -0.19
CAPN1-207ENST00000527189 PLK1P53350 603 aa13.84□□□□□ -0.19
CAPN1-207ENST00000527189 PITX1P78337 314 aaPredicted RBP13.84□□□□□ -0.19
CAPN1-207ENST00000527189 ECT2LQ008S8 904 aa13.84□□□□□ -0.19
CAPN1-207ENST00000527189 ZNF252P-AS1Q0IIN9 211 aa13.84□□□□□ -0.19
CAPN1-207ENST00000527189 DRAP1Q14919 205 aaPredicted RBP13.84□□□□□ -0.19
CAPN1-207ENST00000527189 ACBD5Q5T8D3 534 aaPredicted RBP13.84□□□□□ -0.19
CAPN1-207ENST00000527189 IL27RAQ6UWB1 636 aa13.84□□□□□ -0.19
CAPN1-207ENST00000527189 FAM183BPQ6ZVS7 135 aa13.84□□□□□ -0.19
CAPN1-207ENST00000527189 PASD1Q8IV76 773 aa13.84□□□□□ -0.19
CAPN1-207ENST00000527189 ZNF366Q8N895 744 aa13.84□□□□□ -0.19
CAPN1-207ENST00000527189 C1orf216Q8TAB5 229 aa13.84□□□□□ -0.19
CAPN1-207ENST00000527189 MRGPRX3Q96LB0 322 aa13.84□□□□□ -0.19
CAPN1-207ENST00000527189 ANP32EQ9BTT0 268 aa13.84□□□□□ -0.19
CAPN1-207ENST00000527189 NAA15Q9BXJ9 866 aaKnown RBP13.84□□□□□ -0.19
CAPN1-207ENST00000527189 STK33Q9BYT3 514 aa13.84□□□□□ -0.19
CAPN1-207ENST00000527189 PDCL3Q9H2J4 239 aa13.84□□□□□ -0.19
CAPN1-207ENST00000527189 SYNCQ9H7C4 482 aa13.84□□□□□ -0.19
CAPN1-207ENST00000527189 SAMSN1Q9NSI8 373 aaKnown RBP13.84□□□□□ -0.19
CAPN1-207ENST00000527189 AJAP1Q9UKB5 411 aaPredicted RBP13.84□□□□□ -0.19
CAPN1-207ENST00000527189 ERVW-1Q9UQF0 538 aa13.84□□□□□ -0.19
CAPN1-207ENST00000527189 NCKAP1Q9Y2A7 1128 aa13.84□□□□□ -0.19
CAPN1-207ENST00000527189 PCNX2A6NKB5 2137 aa13.84□□□□□ -0.19
CAPN1-207ENST00000527189 PCDH15Q96QU1 1955 aa13.83□□□□□ -0.19
CAPN1-207ENST00000527189 CACNA1EQ15878 2313 aa13.83□□□□□ -0.2
CAPN1-207ENST00000527189 DAB1O75553 588 aa13.83□□□□□ -0.2
CAPN1-207ENST00000527189 GJB3O75712 270 aa13.83□□□□□ -0.2
CAPN1-207ENST00000527189 F9P00740 461 aa13.83□□□□□ -0.2
CAPN1-207ENST00000527189 ERBB2P04626 1255 aa13.83□□□□□ -0.2
CAPN1-207ENST00000527189 UCHL3P15374 230 aa13.83□□□□□ -0.2
CAPN1-207ENST00000527189 CYP11B1P15538 503 aa13.83□□□□□ -0.2
CAPN1-207ENST00000527189 ACSL1P33121 698 aa13.83□□□□□ -0.2
CAPN1-207ENST00000527189 MATKP42679 507 aa13.83□□□□□ -0.2
CAPN1-207ENST00000527189 PTPN20Q4JDL3 420 aa13.83□□□□□ -0.2
CAPN1-207ENST00000527189 RNF219Q5W0B1 726 aaPredicted RBP13.83□□□□□ -0.2
CAPN1-207ENST00000527189 CCAR2Q8N163 923 aaKnown RBP13.83□□□□□ -0.2
CAPN1-207ENST00000527189 DEFB124Q8NES8 71 aa13.83□□□□□ -0.2
CAPN1-207ENST00000527189 NT5C3BQ969T7 300 aa13.83□□□□□ -0.2
CAPN1-207ENST00000527189 C18orf8Q96DM3 657 aa13.83□□□□□ -0.2
CAPN1-207ENST00000527189 PGAP3Q96FM1 320 aaPredicted RBP13.83□□□□□ -0.2
CAPN1-207ENST00000527189 PLCB1Q9NQ66 1216 aa13.83□□□□□ -0.2
CAPN1-207ENST00000527189 FSCN3Q9NQT6 498 aa13.83□□□□□ -0.2
CAPN1-207ENST00000527189 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.83□□□□□ -0.2
CAPN1-207ENST00000527189 DAAM1Q9Y4D1 1078 aa13.83□□□□□ -0.2
CAPN1-207ENST00000527189 PAXBP1Q9Y5B6 917 aa13.83□□□□□ -0.2
CAPN1-207ENST00000527189 HELZ2Q9BYK8 2649 aaKnown RBP13.83□□□□□ -0.2
CAPN1-207ENST00000527189 ITIH6Q6UXX5 1313 aa13.83□□□□□ -0.2
CAPN1-207ENST00000527189 MUC22E2RYF6 1773 aaPredicted RBP13.83□□□□□ -0.2
CAPN1-207ENST00000527189 EDDM13A0A1B0GTR0 161 aa13.82□□□□□ -0.2
CAPN1-207ENST00000527189 M0QYT0 321 aa13.82□□□□□ -0.2
CAPN1-207ENST00000527189 PES1O00541 588 aaKnown RBP13.82□□□□□ -0.2
CAPN1-207ENST00000527189 SIN3BO75182 1162 aa13.82□□□□□ -0.2
CAPN1-207ENST00000527189 GRAP2O75791 330 aa13.82□□□□□ -0.2
CAPN1-207ENST00000527189 SEMA4FO95754 770 aa13.82□□□□□ -0.2
CAPN1-207ENST00000527189 LSM8O95777 96 aaKnown RBP13.82□□□□□ -0.2
CAPN1-207ENST00000527189 ZNF883P0CG24 379 aa13.82□□□□□ -0.2
CAPN1-207ENST00000527189 CD59P13987 128 aa13.82□□□□□ -0.2
CAPN1-207ENST00000527189 RDXP35241 583 aaKnown RBP13.82□□□□□ -0.2
CAPN1-207ENST00000527189 AFF3P51826 1226 aaKnown RBP13.82□□□□□ -0.2
CAPN1-207ENST00000527189 GRIK2Q13002 908 aa13.82□□□□□ -0.2
CAPN1-207ENST00000527189 AUHQ13825 339 aaKnown RBP13.82□□□□□ -0.2
CAPN1-207ENST00000527189 RAPGEF1Q13905 1077 aa13.82□□□□□ -0.2
CAPN1-207ENST00000527189 C5orf22Q49AR2 442 aa13.82□□□□□ -0.2
CAPN1-207ENST00000527189 BRMS1LQ5PSV4 323 aa13.82□□□□□ -0.2
CAPN1-207ENST00000527189 C9orf64Q5T6V5 341 aa13.82□□□□□ -0.2
CAPN1-207ENST00000527189 FBXL22Q6P050 247 aa13.82□□□□□ -0.2
CAPN1-207ENST00000527189 MMS22LQ6ZRQ5 1243 aa13.82□□□□□ -0.2
CAPN1-207ENST00000527189 RBM43Q6ZSC3 357 aaKnown RBP13.82□□□□□ -0.2
CAPN1-207ENST00000527189 FAM124AQ86V42 546 aa13.82□□□□□ -0.2
CAPN1-207ENST00000527189 ERICH1Q86X53 443 aa13.82□□□□□ -0.2
CAPN1-207ENST00000527189 CACUL1Q86Y37 369 aa13.82□□□□□ -0.2
CAPN1-207ENST00000527189 APCDD1Q8J025 514 aa13.82□□□□□ -0.2
CAPN1-207ENST00000527189 MSANTD4Q8NCY6 345 aa13.82□□□□□ -0.2
CAPN1-207ENST00000527189 NPY6RQ99463 290 aa13.82□□□□□ -0.2
CAPN1-207ENST00000527189 MIR1-1HGQ9H1L0 117 aa13.82□□□□□ -0.2
CAPN1-207ENST00000527189 PABPC3Q9H361 631 aaKnown RBP13.82□□□□□ -0.2
CAPN1-207ENST00000527189 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.82□□□□□ -0.2
CAPN1-207ENST00000527189 EIF2B4Q9UI10 523 aaKnown RBP13.82□□□□□ -0.2
CAPN1-207ENST00000527189 TPX2Q9ULW0 747 aaKnown RBP13.82□□□□□ -0.2
CAPN1-207ENST00000527189 STAP1Q9ULZ2 295 aa13.82□□□□□ -0.2
CAPN1-207ENST00000527189 WASF3Q9UPY6 502 aa13.82□□□□□ -0.2
CAPN1-207ENST00000527189 FHOD1Q9Y613 1164 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms