RNA–Protein interactions for RNA: ENST00000526058.1

CCS-203, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 4

Gene CCS, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-203ENST00000526058 MRGPRX3Q96LB0 322 aa17.55■□□□□ 0.4
CCS-203ENST00000526058 RPRD1AQ96P16 312 aaPredicted RBP17.55■□□□□ 0.4
CCS-203ENST00000526058 PRSS16Q9NQE7 514 aa17.55■□□□□ 0.4
CCS-203ENST00000526058 ITM2CQ9NQX7 267 aa17.55■□□□□ 0.4
CCS-203ENST00000526058 USP36Q9P275 1121 aaKnown RBP17.55■□□□□ 0.4
CCS-203ENST00000526058 CNOT1A5YKK6 2376 aaKnown RBP17.55■□□□□ 0.4
CCS-203ENST00000526058 ATXN2Q99700 1313 aaKnown RBP17.54■□□□□ 0.4
CCS-203ENST00000526058 GJB6O95452 261 aa17.54■□□□□ 0.4
CCS-203ENST00000526058 F9P00740 461 aa17.54■□□□□ 0.4
CCS-203ENST00000526058 PDGFRAP16234 1089 aa17.54■□□□□ 0.4
CCS-203ENST00000526058 ITPKAP23677 461 aa17.54■□□□□ 0.4
CCS-203ENST00000526058 MZF1P28698 734 aaPredicted RBP17.54■□□□□ 0.4
CCS-203ENST00000526058 TPMTP51580 245 aa17.54■□□□□ 0.4
CCS-203ENST00000526058 PTP4A2Q12974 167 aa17.54■□□□□ 0.4
CCS-203ENST00000526058 CLEC16AQ2KHT3 1053 aa17.54■□□□□ 0.4
CCS-203ENST00000526058 RAB6CQ53S08 254 aa17.54■□□□□ 0.4
CCS-203ENST00000526058 BRMS1LQ5PSV4 323 aa17.54■□□□□ 0.4
CCS-203ENST00000526058 LYSMD4Q5XG99 296 aa17.54■□□□□ 0.4
CCS-203ENST00000526058 SND1Q7KZF4 910 aaKnown RBP eCLIP17.54■□□□□ 0.4
CCS-203ENST00000526058 DGLUCYQ7Z3D6 616 aa17.54■□□□□ 0.4
CCS-203ENST00000526058 BNIPLQ7Z465 357 aa17.54■□□□□ 0.4
CCS-203ENST00000526058 SLC41A1Q8IVJ1 513 aa17.54■□□□□ 0.4
CCS-203ENST00000526058 AGPAT1Q99943 283 aa17.54■□□□□ 0.4
CCS-203ENST00000526058 RAB6CQ9H0N0 254 aa17.54■□□□□ 0.4
CCS-203ENST00000526058 CBX8Q9HC52 389 aa17.54■□□□□ 0.4
CCS-203ENST00000526058 SEPT11Q9NVA2 429 aaKnown RBP17.54■□□□□ 0.4
CCS-203ENST00000526058 ERVW-1Q9UQF0 538 aa17.54■□□□□ 0.4
CCS-203ENST00000526058 A0A1B0GTH6 734 aa17.53■□□□□ 0.4
CCS-203ENST00000526058 A0A1B0GVM2 712 aa17.53■□□□□ 0.4
CCS-203ENST00000526058 TCAF2A6NFQ2 919 aa17.53■□□□□ 0.4
CCS-203ENST00000526058 NDUFS2O75306 463 aa17.53■□□□□ 0.4
CCS-203ENST00000526058 MOCS3O95396 460 aa17.53■□□□□ 0.4
CCS-203ENST00000526058 ASLP04424 464 aa17.53■□□□□ 0.4
CCS-203ENST00000526058 SDHBP21912 280 aa17.53■□□□□ 0.4
CCS-203ENST00000526058 CD6P30203 668 aa17.53■□□□□ 0.4
CCS-203ENST00000526058 NSFP46459 744 aaKnown RBP17.53■□□□□ 0.4
CCS-203ENST00000526058 ATP11AP98196 1134 aa17.53■□□□□ 0.4
CCS-203ENST00000526058 ZNF33AQ06730 810 aa17.53■□□□□ 0.4
CCS-203ENST00000526058 MTA1Q13330 715 aa17.53■□□□□ 0.4
CCS-203ENST00000526058 C5orf22Q49AR2 442 aa17.53■□□□□ 0.4
CCS-203ENST00000526058 FILIP1LQ4L180 1135 aa17.53■□□□□ 0.4
CCS-203ENST00000526058 TTC39BQ5VTQ0 682 aaPredicted RBP17.53■□□□□ 0.4
CCS-203ENST00000526058 CXorf57Q6NSI4 855 aaKnown RBP17.53■□□□□ 0.4
CCS-203ENST00000526058 ARCQ7LC44 396 aa17.53■□□□□ 0.4
CCS-203ENST00000526058 IRF2BP2Q7Z5L9 587 aa17.53■□□□□ 0.4
CCS-203ENST00000526058 OR52K2Q8NGK3 314 aa17.53■□□□□ 0.4
CCS-203ENST00000526058 JOSD2Q8TAC2 188 aa17.53■□□□□ 0.4
CCS-203ENST00000526058 BAP1Q92560 729 aa17.53■□□□□ 0.4
CCS-203ENST00000526058 TOE1Q96GM8 510 aaKnown RBP17.53■□□□□ 0.4
CCS-203ENST00000526058 WSB2Q9NYS7 404 aaPredicted RBP17.53■□□□□ 0.4
CCS-203ENST00000526058 ADAM22Q9P0K1 906 aa17.53■□□□□ 0.4
CCS-203ENST00000526058 SUN2Q9UH99 717 aa17.53■□□□□ 0.4
CCS-203ENST00000526058 DOCK4Q8N1I0 1966 aa17.53■□□□□ 0.4
CCS-203ENST00000526058 NCOR2Q9Y618 2525 aa17.53■□□□□ 0.4
CCS-203ENST00000526058 DCDC2BA2VCK2 349 aa17.52■□□□□ 0.4
CCS-203ENST00000526058 TTC34A8MYJ7 566 aa17.52■□□□□ 0.4
CCS-203ENST00000526058 SLC30A4O14863 429 aa17.52■□□□□ 0.4
CCS-203ENST00000526058 CNTN5O94779 1100 aa17.52■□□□□ 0.4
CCS-203ENST00000526058 ACADMP11310 421 aa17.52■□□□□ 0.4
CCS-203ENST00000526058 FERP16591 822 aa17.52■□□□□ 0.4
CCS-203ENST00000526058 ST8SIA6P61647 398 aa17.52■□□□□ 0.4
CCS-203ENST00000526058 IRX4P78413 519 aa17.52■□□□□ 0.4
CCS-203ENST00000526058 ECT2LQ008S8 904 aa17.52■□□□□ 0.4
CCS-203ENST00000526058 C15orf59Q2T9L4 293 aaPredicted RBP17.52■□□□□ 0.4
CCS-203ENST00000526058 CCDC14Q49A88 953 aa17.52■□□□□ 0.4
CCS-203ENST00000526058 SH3PXD2AQ5TCZ1 1133 aa17.52■□□□□ 0.4
CCS-203ENST00000526058 LUZP1Q86V48 1076 aa17.52■□□□□ 0.4
CCS-203ENST00000526058 FAM131BQ86XD5 332 aa17.52■□□□□ 0.4
CCS-203ENST00000526058 PHF13Q86YI8 300 aaPredicted RBP17.52■□□□□ 0.4
CCS-203ENST00000526058 SYT12Q8IV01 421 aa17.52■□□□□ 0.4
CCS-203ENST00000526058 ZNF683Q8IZ20 524 aa17.52■□□□□ 0.4
CCS-203ENST00000526058 RXFP2Q8WXD0 754 aa17.52■□□□□ 0.4
CCS-203ENST00000526058 RPL10LQ96L21 214 aaKnown RBP17.52■□□□□ 0.4
CCS-203ENST00000526058 HSPA12BQ96MM6 686 aa17.52■□□□□ 0.4
CCS-203ENST00000526058 RTKNQ9BST9 563 aa17.52■□□□□ 0.4
CCS-203ENST00000526058 SLCO3A1Q9UIG8 710 aa17.52■□□□□ 0.4
CCS-203ENST00000526058 PILRBQ9UKJ0 227 aa17.52■□□□□ 0.4
CCS-203ENST00000526058 ADAMTS9Q9P2N4 1935 aa17.52■□□□□ 0.4
CCS-203ENST00000526058 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.51■□□□□ 0.39
CCS-203ENST00000526058 LNP1A1A4G5 178 aa17.51■□□□□ 0.39
CCS-203ENST00000526058 LRRC53A6NM62 1247 aa17.51■□□□□ 0.39
CCS-203ENST00000526058 KHNYNO15037 678 aaKnown RBP17.51■□□□□ 0.39
CCS-203ENST00000526058 SIN3BO75182 1162 aa17.51■□□□□ 0.39
CCS-203ENST00000526058 ENDOD1O94919 500 aa17.51■□□□□ 0.39
CCS-203ENST00000526058 SERPINC1P01008 464 aa17.51■□□□□ 0.39
CCS-203ENST00000526058 SRPRAP08240 638 aaKnown RBP17.51■□□□□ 0.39
CCS-203ENST00000526058 RDXP35241 583 aaKnown RBP17.51■□□□□ 0.39
CCS-203ENST00000526058 STK19P49842 368 aaPredicted RBP17.51■□□□□ 0.39
CCS-203ENST00000526058 RPS14P62263 151 aaKnown RBP17.51■□□□□ 0.39
CCS-203ENST00000526058 ZNF177Q13360 481 aaPredicted RBP17.51■□□□□ 0.39
CCS-203ENST00000526058 SLC12A1Q13621 1099 aa17.51■□□□□ 0.39
CCS-203ENST00000526058 NR1I3Q14994 352 aa17.51■□□□□ 0.39
CCS-203ENST00000526058 CDO1Q16878 200 aa17.51■□□□□ 0.39
CCS-203ENST00000526058 HNRNPA1L2Q32P51 320 aaKnown RBP17.51■□□□□ 0.39
CCS-203ENST00000526058 ALFQ53S48 1182 aa17.51■□□□□ 0.39
CCS-203ENST00000526058 ARTNQ5T4W7 220 aa17.51■□□□□ 0.39
CCS-203ENST00000526058 STPG1Q5TH74 334 aa17.51■□□□□ 0.39
CCS-203ENST00000526058 MON1BQ7L1V2 547 aa17.51■□□□□ 0.39
CCS-203ENST00000526058 ERMP1Q7Z2K6 904 aa17.51■□□□□ 0.39
CCS-203ENST00000526058 FAM124AQ86V42 546 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms